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Os03g0648300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : IQ calmodulin-binding region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.29 (0.0148) R2 : 0.801
β1 : 1.14 (0.0541) R2dD : 0.201 R2D : 0.0901
β2 : 1.14 (0.0353) R2dC : 0.455 R2C : 0.421
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.657 (0.0315) R2dN8 : 0.254 R2N8 : 0.132
σ : 0.278
deviance : 35.2
__
_____
C
peak time of C : 1.17
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.46 0.251 9.46 -0.372 1.12 0.994 0.662 -7.56 0.585 1.24 30 2745 -- --
32.02 0.264 9.34 0.77 1.16 0.375 0.301 -- 0.479 1.21 24.59 25277 -- --
30.25 0.256 9.46 -0.366 1.12 0.99 -- -7.41 0.585 1.26 30 2730 -- --
30.92 0.259 9.33 0.612 1.11 0.556 -- -- 0.462 1.22 19.5 21837 -- --
102.43 0.474 9.27 1.32 -- -0.609 -- 0.662 0.672 -- 29.71 2557 -- --
33.61 0.272 9.29 1.16 1.14 -- 0.62 -- 0.661 1.15 -- -- -- --
35.2 0.278 9.29 1.14 1.14 -- -- -- 0.657 1.17 -- -- -- --
95.76 0.458 9.23 1.27 -- -0.442 -- -- 0.86 -- 25.5 927 -- --
32.11 0.264 9.37 -- 1.12 0.962 -- -- 0.297 1.17 18.5 47520 -- --
115.35 0.502 9.27 1.18 -- -- -- -- 0.68 -- -- -- -- --
69.44 0.39 9.32 -- 1.16 -- -- -- 0.53 1.21 -- -- -- --
110.04 0.489 9.36 -- -- 1.02 -- -- 0.298 -- 18.6 47520 -- --
152.29 0.576 9.3 -- -- -- -- -- 0.549 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.85 radiation 1 14400 < th dose dependent rect. 23 6
3 27.92 radiation 1 14400 < th dose dependent rect. 20 9
7 28.11 radiation 30 30 < th dose dependent rect. 2 21
9 28.21 temperature 25 4320 > th dose dependent rect. 18 14
10 28.22 temperature 25 4320 > th dose dependent rect. 18 5
12 28.24 radiation 20 30 < th dose independent rect. 2 21
17 28.27 temperature 25 4320 > th dose dependent rect. 18 11
22 28.29 temperature 25 4320 > th dose dependent rect. 18 9
38 28.41 temperature 25 4320 > th dose dependent rect. 20 1
39 28.41 wind 1 43200 < th dose dependent rect. 23 3
40 28.45 humidity 90 14400 > th dose dependent rect. 2 1
49 28.50 wind 1 43200 < th dose independent rect. 22 4
61 28.59 radiation 30 30 < th dose dependent rect. 24 23
67 28.64 temperature 25 90 > th dose dependent rect. 17 15
71 28.66 temperature 25 4320 > th dose dependent sin 11 NA
79 28.68 radiation 20 30 < th dose independent rect. 24 23
85 28.69 wind 9 14400 > th dose independent rect. 22 16
87 28.70 atmosphere 1005 43200 < th dose independent rect. 19 4
92 28.72 humidity 90 14400 > th dose dependent rect. 2 5
99 28.74 wind 1 43200 < th dose dependent rect. 20 6
122 28.79 radiation 40 90 < th dose dependent rect. 2 17
126 28.80 wind 9 14400 > th dose dependent sin 6 NA
129 28.81 wind 9 14400 > th dose dependent rect. 22 16
131 28.82 wind 9 14400 > th dose independent sin 6 NA
135 28.83 humidity 90 14400 > th dose dependent rect. 24 6
139 28.84 wind 1 43200 < th dose independent rect. 20 6
140 28.84 atmosphere 1000 30 > th dose independent rect. 2 21
148 28.86 wind 9 43200 > th dose independent rect. 9 7
149 28.86 humidity 60 43200 > th dose independent rect. 21 15
154 28.87 humidity 60 43200 > th dose independent rect. 2 10
159 28.88 wind 7 14400 < th dose independent rect. 10 2
168 28.88 radiation 30 30 < th dose dependent rect. 11 23
173 28.89 wind 7 14400 > th dose dependent rect. 3 10
176 28.89 radiation 40 270 < th dose dependent rect. 24 19
178 28.90 wind 7 14400 > th dose independent rect. 10 2
179 28.90 wind 9 43200 < th dose independent rect. 9 7
180 28.90 wind 9 14400 > th dose independent rect. 23 13
181 28.90 wind 9 14400 < th dose independent rect. 22 16
197 28.92 wind 9 43200 > th dose independent rect. 10 4
200 28.92 humidity 60 43200 < th dose independent rect. 4 8
205 28.92 humidity 60 43200 < th dose independent rect. 21 15
224 28.94 radiation 30 270 < th dose independent rect. 24 19
238 28.95 temperature 25 720 > th dose dependent rect. 17 16
250 28.96 humidity 70 43200 < th dose dependent rect. 5 6
257 28.97 wind 7 14400 < th dose independent rect. 9 4
275 28.98 wind 1 43200 > th dose independent rect. 22 4
282 28.98 humidity 90 14400 > th dose dependent rect. 24 12
286 28.99 atmosphere 1005 43200 > th dose independent rect. 11 1
290 28.99 temperature 25 720 > th dose dependent rect. 17 5
319 29.01 wind 7 43200 > th dose dependent rect. 10 4
328 29.01 radiation 30 30 < th dose dependent rect. 15 23
330 29.02 wind 7 14400 < th dose independent rect. 4 9
334 29.02 radiation 30 30 < th dose dependent no NA NA
335 29.02 radiation 1 14400 < th dose dependent rect. 4 1
351 29.02 radiation 30 30 < th dose dependent rect. 13 23
352 29.02 radiation 30 10 < th dose dependent rect. 17 23
361 29.04 wind 9 14400 < th dose independent sin 6 NA
362 29.04 atmosphere 1005 43200 > th dose independent rect. 19 2
385 29.05 atmosphere 1005 43200 > th dose independent rect. 18 5
399 29.06 atmosphere 1005 43200 < th dose independent rect. 11 1
406 29.06 wind 9 14400 > th dose independent rect. 3 11
409 29.06 radiation 40 14400 > th dose dependent rect. 8 1
439 29.08 humidity 60 43200 < th dose independent sin 9 NA
440 29.08 radiation 20 43200 > th dose independent rect. 6 1
469 29.09 radiation 40 43200 < th dose independent rect. 10 1
495 29.10 wind 9 43200 > th dose independent rect. 9 11
498 29.10 radiation 30 90 < th dose independent rect. 2 17
500 29.10 temperature 25 90 > th dose dependent rect. 17 6
505 29.10 humidity 60 43200 < th dose dependent rect. 4 12
518 29.11 radiation 10 90 < th dose independent rect. 2 17
523 29.11 wind 7 43200 > th dose dependent rect. 9 8
541 29.12 humidity 60 43200 < th dose dependent sin 5 NA
548 29.12 radiation 40 10 < th dose dependent rect. 11 12
560 29.13 temperature 25 4320 > th dose independent rect. 18 14
564 29.13 wind 1 43200 < th dose dependent rect. 6 2
574 29.14 wind 1 43200 > th dose independent rect. 20 6
575 29.14 wind 9 43200 < th dose independent rect. 9 11
584 29.14 humidity 90 14400 > th dose dependent sin 7 NA
587 29.14 wind 7 14400 > th dose dependent rect. 7 6
588 29.14 temperature 20 10 > th dose dependent rect. 18 13
652 29.16 radiation 40 270 < th dose dependent rect. 24 12
661 29.17 humidity 50 43200 > th dose independent rect. 14 2
669 29.17 humidity 50 43200 > th dose independent rect. 14 20
671 29.17 humidity 60 43200 < th dose dependent rect. 10 1
672 29.17 wind 3 43200 < th dose dependent rect. 21 2
692 29.18 radiation 40 43200 > th dose dependent rect. 11 1
693 29.18 wind 3 43200 < th dose dependent rect. 19 4
709 29.18 radiation 30 30 < th dose dependent rect. 9 23
710 29.19 atmosphere 1005 43200 < th dose independent sin 14 NA
752 29.20 temperature 25 4320 < th dose independent rect. 18 1
755 29.20 radiation 20 43200 < th dose independent rect. 8 2
776 29.21 humidity 60 43200 > th dose independent sin 9 NA
785 29.21 temperature 25 4320 < th dose independent rect. 18 14
787 29.21 temperature 25 720 > th dose dependent sin 11 NA
789 29.21 humidity 60 43200 < th dose dependent sin 10 NA
790 29.21 temperature 25 720 > th dose dependent rect. 18 1
801 29.21 humidity 60 43200 < th dose dependent rect. 15 22
807 29.22 wind 3 1440 > th dose independent rect. 6 5
815 29.22 atmosphere 1005 43200 < th dose independent rect. 8 16
816 29.22 radiation 30 43200 < th dose independent rect. 15 19
819 29.22 wind 3 43200 < th dose dependent rect. 19 1
850 29.23 wind 9 43200 > th dose independent sin 21 NA
906 29.24 wind 9 43200 < th dose independent sin 21 NA
912 29.24 wind 3 1440 < th dose independent rect. 6 6
914 29.24 wind 3 1440 > th dose independent rect. 6 7
929 29.24 temperature 30 1440 > th dose independent rect. 18 22
991 29.25 radiation 40 43200 > th dose dependent rect. 9 3