Os06g0155300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os06g0155300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.45 | 0.31 | 12.3 | -0.661 | 1.19 | 0.807 | 0.783 | -7.48 | 0.741 | 2.35 | 26.8 | 4211 | -- | -- |
| 52.53 | 0.34 | 12.1 | 0.964 | 1.12 | -0.204 | 0.646 | -- | 1.01 | 2.25 | 26.8 | 4211 | -- | -- |
| 45.64 | 0.315 | 12.2 | -0.645 | 1.19 | 0.792 | -- | -7.24 | 0.742 | 2.38 | 26.85 | 4263 | -- | -- |
| 53.44 | 0.34 | 12.1 | 0.849 | 1.16 | 0.232 | -- | -- | 0.968 | 2.34 | 15.62 | 4334 | -- | -- |
| 101.18 | 0.471 | 12 | 1.12 | -- | -1.23 | -- | -0.178 | 1.1 | -- | 25.3 | 3988 | -- | -- |
| 53.11 | 0.342 | 12.1 | 0.94 | 1.18 | -- | 0.7 | -- | 1.01 | 2.28 | -- | -- | -- | -- |
| 54.92 | 0.347 | 12.1 | 0.92 | 1.18 | -- | -- | -- | 1 | 2.31 | -- | -- | -- | -- |
| 101.19 | 0.471 | 12 | 1.13 | -- | -1.24 | -- | -- | 1.1 | -- | 25.3 | 3988 | -- | -- |
| 56.9 | 0.351 | 12.1 | -- | 1.17 | 0.718 | -- | -- | 0.68 | 2.35 | 13.56 | 45938 | -- | -- |
| 137.75 | 0.548 | 12 | 0.97 | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
| 77.23 | 0.411 | 12.1 | -- | 1.2 | -- | -- | -- | 0.9 | 2.33 | -- | -- | -- | -- |
| 134.48 | 0.542 | 12.1 | -- | -- | -1.08 | -- | -- | 0.969 | -- | 25.3 | 3988 | -- | -- |
| 162.56 | 0.595 | 12.1 | -- | -- | -- | -- | -- | 0.924 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.18 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 2 | 42.49 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 4 | 42.65 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 7 | 43.49 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 10 | 43.61 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 11 | 43.62 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 13 | 43.68 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 14 | 43.72 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 15 | 43.72 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 16 | 43.75 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 26 | 43.91 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 36 | 44.04 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 20 |
| 38 | 44.05 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 5 |
| 49 | 44.09 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 9 | NA |
| 65 | 44.15 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 76 | 44.20 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 21 |
| 82 | 44.22 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 17 | 18 |
| 117 | 44.30 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 121 | 44.31 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 136 | 44.34 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 144 | 44.35 | temperature | 25.0 | 4320 | > th | dose dependent | no | NA | NA |
| 148 | 44.35 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 22 |
| 150 | 44.35 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 156 | 44.35 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 23 |
| 158 | 44.36 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 159 | 44.36 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 164 | 44.36 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 20 |
| 231 | 44.40 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 251 | 44.41 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 16 |
| 267 | 44.42 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 437 | 44.52 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 519 | 44.56 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 24 | 16 |
| 522 | 44.56 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 20 | 20 |
| 649 | 44.62 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 785 | 44.70 | radiation | 20.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 791 | 44.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 806 | 44.71 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 829 | 44.71 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 22 |
| 864 | 44.73 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 885 | 44.75 | temperature | 25.0 | 14400 | > th | dose independent | sin | 1 | NA |
| 886 | 44.75 | temperature | 25.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 975 | 44.80 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 980 | 44.80 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |