Os05g0123200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os05g0123200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.81 | 0.393 | 11 | -1.07 | 0.0991 | 1.1 | -0.709 | -2.55 | -0.0169 | 17.3 | 26.92 | 1140 | -- | -- |
| 70.92 | 0.392 | 10.9 | -0.552 | 0.1 | 0.841 | -0.771 | -- | 0.0689 | 17.5 | 26.64 | 1116 | -- | -- |
| 70.84 | 0.392 | 11 | -1.09 | 0.131 | 1.08 | -- | -2.6 | -0.0218 | 19.3 | 27.07 | 1172 | -- | -- |
| 71.81 | 0.395 | 10.9 | -0.511 | 0.138 | 0.793 | -- | -- | 0.102 | 19.8 | 27.4 | 1153 | -- | -- |
| 71.46 | 0.394 | 11 | -1.05 | -- | 1.11 | -- | -2.54 | -0.0156 | -- | 26.94 | 1114 | -- | -- |
| 96.54 | 0.461 | 10.9 | -0.29 | 0.23 | -- | 0.171 | -- | 0.0833 | 22.6 | -- | -- | -- | -- |
| 96.62 | 0.46 | 10.9 | -0.296 | 0.233 | -- | -- | -- | 0.0835 | 22.1 | -- | -- | -- | -- |
| 72.59 | 0.397 | 10.9 | -0.529 | -- | 0.854 | -- | -- | 0.0784 | -- | 26.83 | 1094 | -- | -- |
| 78.31 | 0.412 | 10.9 | -- | 0.16 | 0.669 | -- | -- | 0.192 | 20 | 28.39 | 1153 | -- | -- |
| 99.89 | 0.467 | 10.9 | -0.293 | -- | -- | -- | -- | 0.0839 | -- | -- | -- | -- | -- |
| 98.93 | 0.465 | 10.9 | -- | 0.231 | -- | -- | -- | 0.117 | 22 | -- | -- | -- | -- |
| 79.37 | 0.415 | 10.9 | -- | -- | 0.735 | -- | -- | 0.172 | -- | 27.8 | 1096 | -- | -- |
| 102.15 | 0.472 | 10.9 | -- | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.96 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 19 |
| 10 | 72.50 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 21 | 72.83 | temperature | 25 | 720 | > th | dose dependent | sin | 14 | NA |
| 26 | 73.01 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 29 | 73.07 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 10 |
| 78 | 73.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 83 | 73.81 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 113 | 74.06 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 17 |
| 117 | 74.08 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 121 | 74.12 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 135 | 74.23 | temperature | 30 | 720 | < th | dose independent | sin | 13 | NA |
| 142 | 74.30 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 15 |
| 144 | 74.33 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 162 | 74.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 191 | 74.53 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 201 | 74.54 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 209 | 74.56 | temperature | 30 | 720 | > th | dose independent | sin | 13 | NA |
| 235 | 74.61 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 2 |
| 375 | 74.83 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 378 | 74.83 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 22 |
| 407 | 74.88 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 462 | 74.99 | radiation | 1 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 500 | 75.08 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 521 | 75.13 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 560 | 75.23 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 583 | 75.26 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 628 | 75.29 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 4 |
| 630 | 75.30 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 2 |
| 632 | 75.30 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 667 | 75.35 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 10 |
| 730 | 75.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 843 | 75.50 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 939 | 75.51 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 949 | 75.51 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 11 |
| 996 | 75.55 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 999 | 75.56 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 8 |