Os03g0787200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os03g0787200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 200.97 | 0.666 | 7.41 | 2.55 | 0.776 | -5.04 | -0.707 | -3.7 | 1.23 | 20.9 | 0.6248 | 1436 | -- | -- |
| 206.9 | 0.67 | 7.47 | 2.22 | 0.771 | -4.18 | -0.691 | -- | 1.2 | 20.9 | 0.6202 | 1436 | -- | -- |
| 201.41 | 0.661 | 7.4 | 2.6 | 0.912 | -5.05 | -- | -3.82 | 1.26 | 21.4 | 0.5766 | 1446 | -- | -- |
| 208.13 | 0.672 | 7.47 | 2.22 | 0.783 | -4.14 | -- | -- | 1.2 | 21.1 | 0.566 | 1436 | -- | -- |
| 218.81 | 0.689 | 7.38 | 2.53 | -- | -5.02 | -- | -3.63 | 1.28 | -- | 0.3902 | 1396 | -- | -- |
| 399.33 | 0.937 | 7.35 | 3.25 | 0.79 | -- | -0.334 | -- | 1.72 | 21.2 | -- | -- | -- | -- |
| 399.71 | 0.936 | 7.35 | 3.27 | 0.79 | -- | -- | -- | 1.72 | 21.3 | -- | -- | -- | -- |
| 224.93 | 0.699 | 7.45 | 2.21 | -- | -4.26 | -- | -- | 1.2 | -- | 0.6001 | 1387 | -- | -- |
| 314 | 0.825 | 7.54 | -- | 0.847 | -5.28 | -- | -- | 0.885 | 21.2 | 0.27 | 1441 | -- | -- |
| 436.01 | 0.976 | 7.33 | 3.27 | -- | -- | -- | -- | 1.72 | -- | -- | -- | -- | -- |
| 680.7 | 1.22 | 7.43 | -- | 0.793 | -- | -- | -- | 1.36 | 21.6 | -- | -- | -- | -- |
| 331.8 | 0.848 | 7.52 | -- | -- | -5.25 | -- | -- | 0.908 | -- | 0.2711 | 1395 | -- | -- |
| 717.83 | 1.25 | 7.41 | -- | -- | -- | -- | -- | 1.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 189.52 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 11 |
| 2 | 189.68 | wind | 7 | 43200 | > th | dose independent | rect. | 9 | 12 |
| 19 | 190.92 | wind | 7 | 43200 | > th | dose independent | sin | 21 | NA |
| 25 | 191.16 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 10 |
| 26 | 191.20 | wind | 7 | 43200 | < th | dose independent | sin | 21 | NA |
| 36 | 191.69 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 43 | 192.05 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 51 | 192.26 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 57 | 192.43 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 115 | 193.98 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 122 | 194.14 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 227 | 196.60 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 274 | 197.88 | wind | 7 | 43200 | > th | dose dependent | sin | 19 | NA |
| 287 | 198.09 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 288 | 198.11 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 14 |
| 289 | 198.11 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 19 |
| 338 | 199.23 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 341 | 199.33 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 403 | 200.44 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 428 | 200.89 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 434 | 200.99 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 435 | 200.99 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 469 | 201.39 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 475 | 201.69 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 12 |
| 518 | 202.49 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 543 | 202.91 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 583 | 203.39 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 587 | 203.55 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 629 | 204.13 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 631 | 204.13 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 635 | 204.15 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 645 | 204.23 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 657 | 204.29 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 4 |
| 691 | 204.84 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 695 | 204.89 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 712 | 205.32 | radiation | 10 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 720 | 205.33 | radiation | 10 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 725 | 205.34 | radiation | 1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 745 | 205.40 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 16 |
| 768 | 205.67 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 23 |
| 771 | 205.69 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 777 | 205.83 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 778 | 205.83 | radiation | 1 | 43200 | < th | dose dependent | sin | 13 | NA |
| 782 | 205.87 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 783 | 205.89 | radiation | 1 | 1440 | < th | dose dependent | sin | 13 | NA |
| 818 | 206.34 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 826 | 206.44 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 844 | 206.59 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 845 | 206.59 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 846 | 206.61 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 852 | 206.67 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 853 | 206.69 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 901 | 207.13 | wind | 7 | 43200 | > th | dose independent | rect. | 16 | 23 |
| 907 | 207.26 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 918 | 207.29 | radiation | 1 | 1440 | < th | dose dependent | rect. | 14 | 22 |
| 919 | 207.30 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 22 |
| 924 | 207.33 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 2 |
| 927 | 207.35 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 9 |
| 936 | 207.41 | temperature | 25 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 942 | 207.43 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 943 | 207.43 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 6 |
| 947 | 207.44 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 4 |
| 969 | 207.52 | humidity | 60 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 979 | 207.57 | radiation | 10 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 982 | 207.60 | radiation | 10 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 983 | 207.61 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 4 |
| 992 | 207.67 | wind | 7 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 995 | 207.68 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 999 | 207.73 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 1 |