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Os01g0194200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : IQ calmodulin-binding region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.86 (0.0246) R2 : 0.684
β1 : -2.9 (0.108) R2dD : 0.774 R2D : 0.203
β2 : 0.763 (0.0588) R2dC : 0.113 R2C : 0.118
β3 : 2.32 (0.13) R2dE : 0.361 R2E : -0.171
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.16 (0.0566) R2dN8 : 0.011 R2N8 : -0.0483
σ : 0.45
deviance : 93.29
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_____
C
peak time of C : 2.32
E
wheather : temperature
threshold : 18.5
memory length : 3471
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
93.98 0.455 8.92 -3.07 0.768 1.56 0.397 -1.79 -0.254 2.45 19.7 3413 -- --
93.58 0.451 8.88 -2.87 0.818 2.26 0.626 -- -0.189 2.63 18.5 3505 -- --
94.49 0.453 8.92 -3.07 0.768 1.55 -- -1.79 -0.256 2.31 19.65 3391 -- --
93.29 0.45 8.86 -2.9 0.763 2.32 -- -- -0.16 2.32 18.5 3471 -- --
123.38 0.517 8.9 -2.92 -- 1.63 -- -1.65 -0.2 -- 19.49 2339 -- --
159.11 0.591 8.75 -1.77 0.797 -- 0.313 -- 0.258 2.3 -- -- -- --
159.45 0.591 8.76 -1.78 0.796 -- -- -- 0.256 2.2 -- -- -- --
125.15 0.521 8.85 -2.94 -- 2.42 -- -- -0.181 -- 18.43 3661 -- --
238.25 0.723 8.72 -- 0.803 0.515 -- -- 0.427 2.07 18.5 3471 -- --
197.24 0.656 8.75 -1.74 -- -- -- -- 0.275 -- -- -- -- --
242.68 0.729 8.71 -- 0.762 -- -- -- 0.454 2.16 -- -- -- --
257.46 0.747 8.75 -- -- 0.664 -- -- 0.245 -- 22.5 2273 -- --
277.43 0.777 8.71 -- -- -- -- -- 0.469 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 82.52 humidity 90 14400 > th dose dependent rect. 5 2
2 88.32 humidity 90 14400 < th dose independent rect. 22 3
5 88.69 radiation 30 4320 < th dose independent rect. 16 16
8 89.38 radiation 40 43200 < th dose dependent rect. 18 8
11 89.44 radiation 30 43200 < th dose dependent rect. 18 10
29 89.63 radiation 10 43200 < th dose dependent rect. 18 2
49 90.30 humidity 90 14400 > th dose dependent rect. 23 16
56 90.49 humidity 80 14400 > th dose dependent rect. 22 9
57 90.55 temperature 20 1440 < th dose independent rect. 5 2
62 90.76 temperature 20 1440 > th dose independent rect. 5 2
72 91.21 humidity 90 14400 < th dose independent rect. 22 9
79 91.27 radiation 10 4320 < th dose independent rect. 17 13
89 91.73 humidity 90 14400 > th dose dependent sin 5 NA
95 91.91 radiation 30 14400 > th dose independent rect. 7 1
112 91.98 temperature 25 1440 < th dose dependent rect. 5 4
115 92.01 radiation 10 4320 > th dose dependent rect. 16 16
134 92.43 humidity 60 43200 < th dose dependent rect. 7 2
135 92.45 humidity 90 14400 > th dose independent rect. 23 3
138 92.54 radiation 10 4320 < th dose independent rect. 17 1
140 92.60 humidity 90 14400 > th dose independent rect. 5 2
142 92.61 radiation 1 14400 < th dose independent rect. 18 18
146 92.71 radiation 1 14400 > th dose independent rect. 18 15
153 92.80 humidity 90 14400 > th dose dependent rect. 23 2
157 92.81 humidity 90 14400 < th dose independent rect. 23 14
165 92.87 radiation 1 14400 > th dose independent rect. 18 18
169 92.91 radiation 30 4320 < th dose independent rect. 7 1
181 93.03 humidity 60 43200 < th dose independent rect. 8 1
182 93.04 temperature 20 1440 < th dose independent rect. 3 7
200 93.20 radiation 10 4320 > th dose dependent rect. 17 14
202 93.23 temperature 20 1440 > th dose independent rect. 3 7
203 93.23 radiation 30 4320 < th dose independent rect. 24 8
204 93.23 radiation 10 4320 < th dose independent rect. 17 9
208 93.25 radiation 10 4320 < th dose independent rect. 17 11
220 93.34 temperature 10 1440 > th dose dependent rect. 5 2
230 93.38 humidity 90 14400 > th dose independent rect. 23 14
231 93.38 humidity 90 14400 > th dose independent rect. 23 16
246 93.55 radiation 10 4320 < th dose independent rect. 17 4
251 93.60 humidity 80 14400 > th dose dependent rect. 22 5
255 93.62 wind 9 43200 < th dose dependent rect. 23 1
258 93.63 wind 3 43200 < th dose dependent rect. 23 1
300 93.88 radiation 1 14400 < th dose independent sin 10 NA
309 93.95 temperature 20 1440 < th dose independent rect. 22 14
320 94.04 radiation 1 14400 < th dose independent rect. 24 12
325 94.06 humidity 90 14400 > th dose independent rect. 22 9
329 94.07 radiation 1 14400 > th dose independent sin 10 NA
330 94.07 humidity 90 14400 < th dose independent rect. 5 2
331 94.07 radiation 1 14400 > th dose independent rect. 4 8
344 94.08 radiation 1 14400 < th dose independent rect. 4 8
355 94.11 radiation 10 4320 > th dose dependent rect. 5 3
367 94.12 radiation 1 14400 < th dose independent rect. 18 22
370 94.13 radiation 1 14400 < th dose independent rect. 24 9
379 94.17 radiation 1 14400 > th dose independent rect. 4 5
380 94.17 radiation 1 14400 < th dose independent rect. 4 5
417 94.29 temperature 20 1440 > th dose independent rect. 22 14
431 94.36 radiation 1 14400 > th dose independent rect. 18 22
494 94.50 atmosphere 1015 43200 > th dose independent rect. 15 9
498 94.51 atmosphere 1015 43200 < th dose independent rect. 15 9
504 94.53 atmosphere 1015 43200 < th dose independent rect. 17 4
512 94.55 atmosphere 1015 43200 > th dose independent rect. 16 7
514 94.56 atmosphere 1015 43200 < th dose independent rect. 16 6
519 94.57 humidity 60 43200 > th dose independent rect. 8 1
537 94.63 temperature 20 1440 < th dose independent sin 6 NA
538 94.63 atmosphere 1015 43200 > th dose independent rect. 17 5
550 94.66 wind 1 43200 > th dose dependent rect. 23 1
576 94.73 radiation 1 14400 < th dose independent rect. 15 21
591 94.77 temperature 20 1440 > th dose independent sin 6 NA
592 94.77 atmosphere 1015 43200 > th dose independent rect. 19 2
627 94.79 radiation 30 14400 > th dose dependent rect. 7 1
734 95.00 humidity 90 14400 < th dose independent sin 8 NA
748 95.02 temperature 25 1440 < th dose dependent sin 7 NA
764 95.04 radiation 1 14400 < th dose dependent rect. 24 12
771 95.05 radiation 1 14400 < th dose dependent rect. 19 17
782 95.07 radiation 1 14400 < th dose dependent rect. 4 8
798 95.10 radiation 1 14400 < th dose dependent rect. 24 8
808 95.12 radiation 1 14400 < th dose dependent rect. 19 13
822 95.15 radiation 1 14400 < th dose dependent rect. 4 4
839 95.17 humidity 90 14400 > th dose dependent rect. 10 21
866 95.20 wind 7 43200 > th dose independent rect. 5 6
898 95.27 atmosphere 1015 43200 > th dose dependent rect. 21 1
900 95.28 wind 7 43200 < th dose independent rect. 5 6
908 95.31 atmosphere 1015 43200 > th dose dependent rect. 23 1
914 95.33 atmosphere 1015 43200 > th dose dependent rect. 21 3
947 95.41 humidity 60 43200 < th dose dependent rect. 20 14
966 95.43 radiation 20 4320 < th dose dependent rect. 18 11