Os01g0833800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os01g0833800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.92 | 0.21 | 12.2 | 0.575 | 0.843 | 0.618 | -0.537 | 0.278 | 0.18 | 6.44 | 2.865 | 129 | -- | -- |
| 20.29 | 0.21 | 12.2 | 0.592 | 0.82 | 0.648 | -0.635 | -- | 0.176 | 6.64 | 2.428 | 137 | -- | -- |
| 20.6 | 0.211 | 12.2 | 0.566 | 0.835 | 0.604 | -- | 0.31 | 0.178 | 6.37 | 3.296 | 133 | -- | -- |
| 21.11 | 0.214 | 12.2 | 0.585 | 0.824 | 0.624 | -- | -- | 0.177 | 6.46 | 2.897 | 142 | -- | -- |
| 23.55 | 0.226 | 12.2 | 0.612 | -- | 1.18 | -- | 0.0197 | 0.201 | -- | 2.46 | 506 | -- | -- |
| 25.15 | 0.235 | 12.2 | 0.542 | 1.18 | -- | 0.0478 | -- | 0.145 | 3.94 | -- | -- | -- | -- |
| 25.16 | 0.235 | 12.2 | 0.541 | 1.18 | -- | -- | -- | 0.145 | 3.95 | -- | -- | -- | -- |
| 23.55 | 0.226 | 12.2 | 0.612 | -- | 1.18 | -- | -- | 0.201 | -- | 2.448 | 508 | -- | -- |
| 29.7 | 0.254 | 12.2 | -- | 0.824 | 0.585 | -- | -- | 0.14 | 6.21 | 4.583 | 137 | -- | -- |
| 101.17 | 0.47 | 12.2 | 0.59 | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
| 32.88 | 0.268 | 12.2 | -- | 1.19 | -- | -- | -- | 0.0845 | 3.94 | -- | -- | -- | -- |
| 33.05 | 0.268 | 12.2 | -- | -- | 1.19 | -- | -- | 0.145 | -- | 6.99 | 491 | -- | -- |
| 110.34 | 0.49 | 12.2 | -- | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.00 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 12 |
| 2 | 19.12 | temperature | 15 | 30 | > th | dose dependent | rect. | 6 | 13 |
| 19 | 19.69 | temperature | 10 | 30 | > th | dose dependent | sin | 21 | NA |
| 22 | 19.71 | temperature | 10 | 30 | > th | dose dependent | sin | 19 | NA |
| 46 | 19.97 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 14 |
| 47 | 19.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 19 |
| 53 | 20.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 12 |
| 65 | 20.10 | temperature | 20 | 30 | > th | dose dependent | rect. | 12 | 15 |
| 68 | 20.12 | temperature | 20 | 30 | > th | dose dependent | rect. | 22 | 21 |
| 70 | 20.14 | radiation | 1 | 90 | < th | dose independent | rect. | 3 | 23 |
| 85 | 20.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 12 |
| 91 | 20.22 | radiation | 1 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 98 | 20.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 11 |
| 108 | 20.28 | humidity | 60 | 90 | > th | dose dependent | rect. | 10 | 13 |
| 124 | 20.31 | temperature | 20 | 30 | > th | dose dependent | rect. | 5 | 22 |
| 130 | 20.33 | radiation | 1 | 270 | > th | dose independent | rect. | 9 | 23 |
| 169 | 20.43 | radiation | 1 | 90 | < th | dose independent | rect. | 1 | 23 |
| 180 | 20.45 | humidity | 60 | 10 | > th | dose dependent | rect. | 10 | 12 |
| 185 | 20.45 | radiation | 10 | 90 | < th | dose dependent | rect. | 18 | 23 |
| 187 | 20.46 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 10 |
| 218 | 20.53 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 20 |
| 219 | 20.54 | radiation | 1 | 90 | < th | dose independent | no | NA | NA |
| 221 | 20.54 | humidity | 90 | 30 | < th | dose dependent | rect. | 6 | 13 |
| 224 | 20.55 | radiation | 1 | 90 | > th | dose independent | no | NA | NA |
| 225 | 20.55 | radiation | 1 | 90 | > th | dose independent | rect. | 4 | 15 |
| 270 | 20.55 | radiation | 1 | 90 | < th | dose independent | rect. | 9 | 23 |
| 271 | 20.55 | radiation | 1 | 90 | < th | dose independent | rect. | 11 | 23 |
| 287 | 20.56 | radiation | 1 | 90 | < th | dose independent | rect. | 15 | 23 |
| 312 | 20.59 | radiation | 1 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 315 | 20.60 | radiation | 1 | 90 | < th | dose independent | rect. | 7 | 23 |
| 316 | 20.60 | radiation | 1 | 90 | < th | dose independent | rect. | 17 | 23 |
| 334 | 20.63 | temperature | 30 | 30 | < th | dose dependent | sin | 20 | NA |
| 335 | 20.63 | humidity | 60 | 10 | > th | dose dependent | sin | 19 | NA |
| 347 | 20.63 | radiation | 10 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 361 | 20.65 | humidity | 90 | 30 | < th | dose dependent | rect. | 24 | 19 |
| 415 | 20.70 | radiation | 10 | 270 | < th | dose dependent | rect. | 8 | 13 |
| 424 | 20.71 | radiation | 40 | 270 | < th | dose dependent | rect. | 9 | 12 |
| 435 | 20.73 | radiation | 1 | 90 | > th | dose independent | rect. | 11 | 23 |
| 447 | 20.74 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 452 | 20.75 | radiation | 1 | 90 | < th | dose dependent | no | NA | NA |
| 458 | 20.75 | radiation | 1 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 479 | 20.76 | radiation | 1 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 536 | 20.81 | temperature | 25 | 270 | > th | dose independent | sin | 21 | NA |
| 567 | 20.84 | temperature | 25 | 270 | < th | dose independent | rect. | 8 | 12 |
| 572 | 20.84 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 14 |
| 617 | 20.88 | radiation | 10 | 270 | < th | dose independent | rect. | 8 | 13 |
| 633 | 20.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 2 |
| 634 | 20.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 644 | 20.90 | humidity | 90 | 30 | < th | dose independent | rect. | 6 | 13 |
| 679 | 20.92 | humidity | 80 | 10 | < th | dose independent | rect. | 12 | 7 |
| 712 | 20.94 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 7 |
| 806 | 21.00 | humidity | 70 | 90 | > th | dose independent | rect. | 11 | 12 |
| 820 | 21.00 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 22 |
| 825 | 21.00 | radiation | 1 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 848 | 21.01 | humidity | 50 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 849 | 21.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 5 |
| 972 | 21.09 | temperature | 25 | 270 | < th | dose independent | sin | 23 | NA |