BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0587300 Os04g0587300|AK119483
(376 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0587300 Similar to Purine permease-like protein 591 e-169
Os02g0689200 Protein of unknown function DUF250 domain cont... 431 e-121
Os04g0587400 Protein of unknown function DUF250 domain cont... 313 2e-85
Os09g0548600 252 3e-67
Os09g0467300 Protein of unknown function DUF6, transmembran... 175 5e-44
Os09g0467400 Protein of unknown function DUF6, transmembran... 174 1e-43
Os09g0467500 Protein of unknown function DUF6, transmembran... 123 2e-28
Os01g0680200 Protein of unknown function DUF6, transmembran... 116 3e-26
Os03g0187800 Protein of unknown function DUF250 domain cont... 115 8e-26
Os05g0556800 Protein of unknown function DUF250 domain cont... 102 5e-22
Os01g0504100 Protein of unknown function DUF6, transmembran... 69 4e-12
>Os04g0587300 Similar to Purine permease-like protein
Length = 376
Score = 591 bits (1524), Expect = e-169, Method: Compositional matrix adjust.
Identities = 299/317 (94%), Positives = 299/317 (94%)
Query: 44 FRWWAMVAVDVFFLIAGQTSATLLGRYYYTQGGRSKWISAFVRTAGXXXXXXXXXXXXXX 103
FRWWAMVAVDVFFLIAGQTSATLLGRYYYTQGGRSKWISAFVRTAG
Sbjct: 44 FRWWAMVAVDVFFLIAGQTSATLLGRYYYTQGGRSKWISAFVRTAGFPILFFTLFFFPSK 103
Query: 104 XXXXCTNTPMAKLAVIYIVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFSYV 163
CTNTPMAKLAVIYIVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFSYV
Sbjct: 104 SPSSCTNTPMAKLAVIYIVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFSYV 163
Query: 164 LNSQKVTPLIFNSVVLLTMSASLIGVSKESQGVTGVSGGKYLLGFVLTLGASCTYSLILA 223
LNSQKVTPLIFNSVVLLTMSASLIGVSKESQGVTGVSGGKYLLGFVLTLGASCTYSLILA
Sbjct: 164 LNSQKVTPLIFNSVVLLTMSASLIGVSKESQGVTGVSGGKYLLGFVLTLGASCTYSLILA 223
Query: 224 LMQLTFETIIKKHTFSAVLNMQIYTALVATAASVVGLFASGEWRSLRGEMNAFRSGQFSY 283
LMQLTFETIIKKHTFSAVLNMQIYTALVATAASVVGLFASGEWRSLRGEMNAFRSGQFSY
Sbjct: 224 LMQLTFETIIKKHTFSAVLNMQIYTALVATAASVVGLFASGEWRSLRGEMNAFRSGQFSY 283
Query: 284 LMTLLWAAVSWQVANIGVLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMNGVKIVA 343
LMTLLWAAVSWQVANIGVLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMNGVKIVA
Sbjct: 284 LMTLLWAAVSWQVANIGVLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMNGVKIVA 343
Query: 344 MLIAIWGFISYLFQHYL 360
MLIAIWGFISYLFQHYL
Sbjct: 344 MLIAIWGFISYLFQHYL 360
>Os02g0689200 Protein of unknown function DUF250 domain containing protein
Length = 382
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/323 (66%), Positives = 261/323 (80%), Gaps = 7/323 (2%)
Query: 45 RWWAMVAVDVFFLIAGQTSATLLGRYYYTQGGRSKWISAFVRTAGXXXX-------XXXX 97
+WW MV V++FFLIAGQT++TLLGR+YY QGG SKW+S FV+TAG
Sbjct: 44 QWWLMVGVNMFFLIAGQTASTLLGRFYYNQGGNSKWMSTFVQTAGFPILFIALFLFHSKT 103
Query: 98 XXXXXXXXXXCTNTPMAKLAVIYIVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFN 157
+ K+ +IY+VLGLIIAADD+MY+ GL YLP STYSLICASQLAFN
Sbjct: 104 SSTQTVTSSPAPTISIPKITLIYVVLGLIIAADDLMYSYGLLYLPVSTYSLICASQLAFN 163
Query: 158 VVFSYVLNSQKVTPLIFNSVVLLTMSASLIGVSKESQGVTGVSGGKYLLGFVLTLGASCT 217
VFSY LN+QK TPLIFNSVVLLT SASL+GV ++SQG T +S GKY+LGF+LTLGAS T
Sbjct: 164 AVFSYFLNAQKFTPLIFNSVVLLTFSASLLGVDEDSQGTTSISHGKYILGFLLTLGASAT 223
Query: 218 YSLILALMQLTFETIIKKHTFSAVLNMQIYTALVATAASVVGLFASGEWRSLRGEMNAFR 277
YSLIL+LMQ+TFE +IK+ TFS VLNMQIYTALVAT AS+VGLFASGEW +L+GEM+AF+
Sbjct: 224 YSLILSLMQVTFEKVIKRETFSVVLNMQIYTALVATLASLVGLFASGEWMTLQGEMHAFQ 283
Query: 278 SGQFSYLMTLLWAAVSWQVANIGVLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMN 337
SG+ SY+MTLLW A+SWQVA++GV+GLIF VS+LFSNVIST++LP+IP FAV+ FHD+M+
Sbjct: 284 SGKLSYVMTLLWTAISWQVASVGVVGLIFVVSSLFSNVISTLALPIIPVFAVIFFHDKMD 343
Query: 338 GVKIVAMLIAIWGFISYLFQHYL 360
GVKI+AML+AIWGF+SY Q Y+
Sbjct: 344 GVKIIAMLMAIWGFMSYGHQLYV 366
>Os04g0587400 Protein of unknown function DUF250 domain containing protein
Length = 408
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/318 (49%), Positives = 220/318 (69%), Gaps = 1/318 (0%)
Query: 44 FRWWAMVAVDVFFLIAGQTSATLLGRYYYTQGGRSKWISAFVRTAGXXXXXXXXXXXXXX 103
RWWA+V ++ F++ GQ+ ATLLGR YY QGG S W++ V++ G
Sbjct: 69 LRWWAVVLANIVFVLGGQSVATLLGRIYYDQGGGSLWLATVVQSCGAPLAVPLLLYFRRP 128
Query: 104 XXXXCTNTPMAKLAVIYIVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFSYV 163
P+ K+A IY LG+++A D++MY+ L YLP STYSL+CA+QL FN VFSY
Sbjct: 129 EASPVARPPLLKIAAIYAGLGVLLAGDNLMYSYALLYLPLSTYSLVCATQLCFNAVFSYF 188
Query: 164 LNSQKVTPLIFNSVVLLTMSASLIGVSKESQGV-TGVSGGKYLLGFVLTLGASCTYSLIL 222
LN ++ T L+ NSVVLLT SA+L+GVS S+ + V GK+ LGFVL L AS ++LIL
Sbjct: 189 LNKERFTALVLNSVVLLTFSAALVGVSHSSEETNSSVPEGKFALGFVLALSASAAFALIL 248
Query: 223 ALMQLTFETIIKKHTFSAVLNMQIYTALVATAASVVGLFASGEWRSLRGEMNAFRSGQFS 282
+LMQLTF+T+++ + AVL +Q+++ A+ SV GLF SGEW SL EM+ ++ G+ +
Sbjct: 249 SLMQLTFDTVLRSNAAHAVLELQLWSNAAASCVSVAGLFISGEWSSLTAEMDGYKKGEVA 308
Query: 283 YLMTLLWAAVSWQVANIGVLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMNGVKIV 342
Y MTL W A+SWQ+A +G++GL+ VS+LF+NVISTV +P+ P AV+ DRM+G K++
Sbjct: 309 YGMTLAWTAISWQLATMGMVGLVATVSSLFTNVISTVGMPLSPIMAVIFLGDRMDGAKVI 368
Query: 343 AMLIAIWGFISYLFQHYL 360
AMLI IWGF+SY++QHYL
Sbjct: 369 AMLIGIWGFLSYVYQHYL 386
>Os09g0548600
Length = 346
Score = 252 bits (643), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/317 (44%), Positives = 196/317 (61%), Gaps = 8/317 (2%)
Query: 52 VDVFFLIAGQTSATLLGRYYYTQGGRSKWISAFVRTAGXXXXXXX-XXXXXXXXXXXCTN 110
VD+ L+ G+ A LL R YY GG S W+ ++AG
Sbjct: 2 VDMLMLLVGEAMAPLLTRLYYNSGGNSLWMVTLAQSAGAPLLVIPFLLTPRAAAVGEPRP 61
Query: 111 TPMA-KLAVIYIVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFSYVLNSQKV 169
P A K+ I + LGL++ D++MY+ + YLP ST+SL+ A+QLAFN V S ++N+Q+
Sbjct: 62 APAASKMVAICVALGLVVGCDNLMYSYAMLYLPVSTFSLLAATQLAFNAVTSRLINAQRF 121
Query: 170 TPLIFNSVVLLTMSASLIGVSKESQGVTGV------SGGKYLLGFVLTLGASCTYSLILA 223
TPL+ NSVV+LT SA+L+GV S V G GK+ G VLTL AS Y+LIL+
Sbjct: 122 TPLVVNSVVVLTFSAALLGVDDPSSSVGGGAGGDAVQRGKHAAGVVLTLSASAVYALILS 181
Query: 224 LMQLTFETIIKKHTFSAVLNMQIYTALVATAASVVGLFASGEWRSLRGEMNAFRSGQFSY 283
L + TF+ +I T VL MQI T VA S LFASGEWR++ GEM AF+ G+ +Y
Sbjct: 182 LFEATFDKVIGAATPRWVLKMQISTNAVAATVSATALFASGEWRTIGGEMAAFKGGKAAY 241
Query: 284 LMTLLWAAVSWQVANIGVLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMNGVKIVA 343
T++ AV WQ A +G + LI VS+LF+NV T++LP++P AV +F D+M G K+VA
Sbjct: 242 AATVVGVAVGWQAATLGAVRLIARVSSLFANVTGTLALPMVPVLAVALFGDKMTGTKVVA 301
Query: 344 MLIAIWGFISYLFQHYL 360
ML+A+WGF+SY++QHYL
Sbjct: 302 MLMAVWGFLSYVYQHYL 318
>Os09g0467300 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 390
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 175/331 (52%), Gaps = 28/331 (8%)
Query: 49 MVAVDVFFLIAGQTSATLLGRYYYTQGGRSKWISAFVRTAG-----------XXXXXXXX 97
++ V+ ++ G LL R Y+ +GG KW+S+ ++TAG
Sbjct: 39 LLVVNFVLMVVGSACGPLLLRAYFLRGGNRKWLSSLLQTAGWPLLLAPLCFSYSSRRRRR 98
Query: 98 XXXXXXXXXXCTNTPM----AKLAVIYIVLGLIIAADDMMYTGGLKYLPASTYSLICASQ 153
TP+ +L V V+GL+ DD++Y GL YLP ST S++ ++Q
Sbjct: 99 EVEDDGAGAGAAATPLFLMTPRLLVASAVVGLMTGVDDLLYAYGLAYLPVSTSSILISTQ 158
Query: 154 LAFNVVFSYVLNSQKVTPLIFNSVVLLTMSASLIGVSKESQGVTGVSGGKYLLGFVLTLG 213
LAF F+ +L Q+ T N+VVLL++ A+++G++ GVS +Y GF +TL
Sbjct: 159 LAFTAAFALLLVRQRFTAFSVNAVVLLSVGAAMLGMNAGGDRPAGVSRAQYCAGFAMTLA 218
Query: 214 ASCTYSLILALMQLTFETIIKKH--------TFSAVLNMQIYTALVATAASVVGLFASGE 265
A+ Y L+L +M+L+ + H T++ V+ MQ+ VATA S VG+ + +
Sbjct: 219 AAALYGLVLPVMELS-----QAHHAAARGAVTYTLVMEMQLVIGFVATAFSAVGMLVNND 273
Query: 266 WRSLRGEMNAFRSGQFSYLMTLLWAAVSWQVANIGVLGLIFEVSALFSNVISTVSLPVIP 325
+ ++ GE + F GQ Y + L +A +Q +G +G IF SAL + VI TV +PV
Sbjct: 274 FHAIPGEAHEFGLGQAGYYLLLAGSAAMYQCFFLGTIGAIFYGSALLAGVIMTVLIPVTE 333
Query: 326 FFAVVVFHDRMNGVKIVAMLIAIWGFISYLF 356
AV+ FH+ NG K VA+ +++WGF+SY +
Sbjct: 334 VLAVMFFHEPFNGTKGVALALSLWGFVSYFY 364
>Os09g0467400 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 361
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 173/315 (54%), Gaps = 7/315 (2%)
Query: 47 WAMVAVDVFFLIAGQTSATLLGRYYYTQGGRSKWISAFVRTAGXXXXXXXXXXXXXXXXX 106
W +VA++ L+ G T L+ R Y+++GG +W+SA+++TAG
Sbjct: 25 WLLVALNCGMLVVGTTGGPLISRLYFSKGGHRQWLSAWLQTAGWPLLLVPVAASYLSRRA 84
Query: 107 XCTNTPM----AKLAVIYIVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFSY 162
P+ ++ + + LG + ADD +Y GL YLP ST +++ ++QLAF V F+
Sbjct: 85 RDRRAPLFLTPTRVLLAGVGLGFLNGADDFIYAYGLAYLPVSTSAILISTQLAFTVFFAC 144
Query: 163 VLNSQKVTPLIFNSVVLLTMSASLIGVSKESQGVTGVSGGKYLLGFVLTLGASCTYSLIL 222
++ Q+ T N+V LLT+ A ++G+ GV+ GKY +GF LTLGA+ Y LIL
Sbjct: 145 LIVRQRFTAATLNAVALLTIGAVVLGLHASKDRPAGVTSGKYWMGFFLTLGAAALYGLIL 204
Query: 223 ALMQLTFETII---KKHTFSAVLNMQIYTALVATAASVVGLFASGEWRSLRGEMNAFRSG 279
L++L ++ + T++ V+ MQ+ ATA VG+ + +++++ E + G
Sbjct: 205 PLVELAYKHAAGGGRAVTYALVMEMQLVMGFFATAFCTVGMVVNKDFQAIPREAKQYELG 264
Query: 280 QFSYLMTLLWAAVSWQVANIGVLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMNGV 339
+ Y + L++ AV W+ +G +G+IF V L + +I V +P+ V+ H++ +
Sbjct: 265 EARYYVVLVFNAVLWEFFFVGAVGVIFCVHTLLAGIIIAVFIPITEVLGVIFLHEKFSSE 324
Query: 340 KIVAMLIAIWGFISY 354
K VA+++++WG SY
Sbjct: 325 KGVALVLSLWGLASY 339
>Os09g0467500 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 253
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 124/229 (54%), Gaps = 7/229 (3%)
Query: 47 WAMVAVDVFFLIAGQTSATLLGRYYYTQGGRSKWISAFVRTAGXXXXXXXXXXXXXXXXX 106
W +VA++ L+ G T L+ R Y+++GG +W+SA++ TAG
Sbjct: 25 WLLVALNCGMLMVGTTGGPLISRLYFSKGGHRQWLSAWLETAGWPLLLVPVSASYLGRRA 84
Query: 107 XCTNTPM----AKLAVIYIVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFSY 162
P+ ++ + + LG++ ADD +Y GL YLP ST +++ ++ LAF V F+
Sbjct: 85 RDRGAPLFLTPRRVLLACVGLGVLTGADDFIYAYGLDYLPVSTSAILTSTHLAFTVFFAC 144
Query: 163 VLNSQKVTPLIFNSVVLLTMSASLIGVSKESQGVTGVSGGKYLLGFVLTLGASCTYSLIL 222
++ Q++T N+V LLT+ A ++G+ GV+ GKY +GF L +GA+ Y LIL
Sbjct: 145 LIVRQRLTAATLNAVALLTIGAVVLGLHVSKDRPAGVTNGKYWMGFFLIIGAAALYGLIL 204
Query: 223 ALMQLTFETIIKKH---TFSAVLNMQIYTALVATAASVVGLFASGEWRS 268
L++L ++ + + T++ V+ MQ+ ATA VG+ + +++
Sbjct: 205 PLVELAYKHVAARGRAVTYALVMEMQLVMGFFATAFCTVGMVVNKDFQE 253
>Os01g0680200 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 387
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 154/309 (49%), Gaps = 14/309 (4%)
Query: 57 LIAGQTSATLLGRYYYTQGGRSKWISAFVRTAGXXXXXXXXXXXXXXXXXXCTNTPMA-- 114
L+ G +++LL RYY+ GG ++W++ V++ G P A
Sbjct: 44 LLGGSVASSLLSRYYFAHGGHNRWVATLVQSVGFPFLLVPVYAGRSP----SQPRPFAWF 99
Query: 115 --KLAVIYIVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFSYVLNSQKVTPL 172
+L +V+G+++ ++++++ YLP ST SL+ ++QLAF +V + ++ +
Sbjct: 100 TRRLLAACVVIGVLMGVNNLLFSYSSSYLPVSTSSLLLSTQLAFTLVLAAIIVRHPLNFS 159
Query: 173 IFNSVVLLTMSASLIGVSKESQGVT--GVSGGKYLLGFVLTLGASCTYSLILALMQLTFE 230
N+VVLLT+S+ LI + G G S +Y +GF +TLGA+ ++ L +M+L +
Sbjct: 160 NLNAVVLLTLSSVLIALRSSDSGEQPGGGSRARYFVGFAVTLGAAGLFAAYLPVMELVYR 219
Query: 231 TIIKKHTFSAVLNMQIYTALVATAASVVGLFASGEWRSLRGEMNAFRSGQFSYLMTLLWA 290
+ F + +Q+ ATA +V GL A+G W+ E+ + +Y L
Sbjct: 220 KAVSGG-FRMAVEVQVIMQAAATALAVAGLAAAGGWKE---ELARWDLSPAAYWAVLAAL 275
Query: 291 AVSWQVANIGVLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMNGVKIVAMLIAIWG 350
+WQ +G G+++ S+L S V T L VVVF D K VA ++ +WG
Sbjct: 276 VATWQACLMGTAGMVYLTSSLHSGVCMTAVLTANVIGGVVVFRDPFGADKAVATVLCVWG 335
Query: 351 FISYLFQHY 359
F SYL+ Y
Sbjct: 336 FSSYLYGEY 344
>Os03g0187800 Protein of unknown function DUF250 domain containing protein
Length = 399
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 136/243 (55%), Gaps = 8/243 (3%)
Query: 122 VLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFSYVLNSQKVTPLIFNSVVLLT 181
VLG + A +Y G + LP ST SL+ A+QLAF VF+++ + TP N+VVLLT
Sbjct: 123 VLGGLYAVSCFVYALGSQALPLSTSSLLLATQLAFTAVFAFLFVGLRFTPFSANAVVLLT 182
Query: 182 MSASLIGVSKESQGVTGVSGGKYLLGFVLTLGASCTYSLILALMQLTFETIIKK------ 235
+ +++GV S G S Y GF +GA+ L++ L+++ ++
Sbjct: 183 IGPAVLGVGPSSGKPAGESSRAYWTGFCEAIGAAALAGLVIPLVEVATARYGRRTGPAAR 242
Query: 236 --HTFSAVLNMQIYTALVATAASVVGLFASGEWRSLRGEMNAFRSGQFSYLMTLLWAAVS 293
++ V+ MQ TA V+G+ G+++++ E AF G +Y + L W AVS
Sbjct: 243 VPPPYATVMQMQAVMGAAGTAVCVLGMAIKGDFQAVAREAAAFGLGAANYYLVLAWDAVS 302
Query: 294 WQVANIGVLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMNGVKIVAMLIAIWGFIS 353
WQ+ N+G++GLI S+L + ++ V LP+ AV+ H++ +G K +A+++++WGF S
Sbjct: 303 WQLLNLGIMGLITCASSLLAGIMIAVLLPLSQVLAVIFLHEKFDGTKGIALVLSLWGFAS 362
Query: 354 YLF 356
YL+
Sbjct: 363 YLY 365
>Os05g0556800 Protein of unknown function DUF250 domain containing protein
Length = 394
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 158/316 (50%), Gaps = 20/316 (6%)
Query: 57 LIAGQTSATLLGRYYYTQGGRSKWISAFVRTAGXXXXXXXXXXXXXXXXXXCTNTPMAK- 115
L+ G +++LL R+Y+T GGR++W+ V++AG T +++
Sbjct: 40 LLVGSVASSLLSRFYFTHGGRNRWVVTLVQSAGFPLLVAGALAGGRPASAPRPFTWLSRR 99
Query: 116 -LAVIYIVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFSYVLNSQKVTPLIF 174
LAV +V+G ++ A+++++ LP ST SL+ ++QLAF +V + V+ VT +
Sbjct: 100 FLAVC-LVIGALMGANNLLFAYSTSLLPVSTSSLLLSTQLAFTLVLAVVIVRHPVTFVNL 158
Query: 175 NSVVLLTMSASLIGVSKESQGVTG------VSGGKYLLGFVLTLGASCTYSLILALMQLT 228
N+VVLLT+S+ L+ + G T YL+GFV+TLGA+ +S L +M+L
Sbjct: 159 NAVVLLTLSSVLLALRSGDSGETAEGGVGGGGRKSYLVGFVVTLGAAGLFSAYLPVMELV 218
Query: 229 FETIIKKHTFSAVLNMQIYTALVATAASVVGLFASGEWRSLRGEMNAFRSGQFSYLMTLL 288
+ + F + +Q +A+ + VGL ASG + +++ + G S +
Sbjct: 219 YREAVSG-GFVLAVEVQAVMQAMASLIAAVGLAASG---GVADDVSGWVDGGSS--PAVY 272
Query: 289 WAAV-----SWQVANIGVLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMNGVKIVA 343
WA V +WQ +G G+I+ S+L S V L + V VF D K +A
Sbjct: 273 WAVVATLVLTWQACFMGTAGVIYLTSSLHSGVCMAAVLTLNVLGGVAVFGDPFGAEKALA 332
Query: 344 MLIAIWGFISYLFQHY 359
+ WGF SYL+ Y
Sbjct: 333 TALCAWGFSSYLYGEY 348
>Os01g0504100 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 379
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 145/308 (47%), Gaps = 32/308 (10%)
Query: 69 RYYYTQGGRSKWISAFVRTAGXXXXXXXXXXXXXXXXXXCTNTPMAK--------LAVIY 120
R+Y+ GG +W++ V++AG C P ++ L +
Sbjct: 68 RFYFAHGGADRWLATLVQSAGFPALLLPLM---------CARRPASRPFAGFTPRLVMYC 118
Query: 121 IVLGLIIAADDMMYTGGLKYLPASTYSLICASQLAFNVVFSYVLNSQKVTPLIFNSVVLL 180
++LGL++ ++++Y+ G YLP ST +L+ + QLAF + + L ++ FN+VVLL
Sbjct: 119 VLLGLVMGLNNLLYSCGTSYLPVSTTALLLSMQLAFTLALAAALVRVPLSFANFNAVVLL 178
Query: 181 TMSASLIGVSK---ESQGVTGVSGGKYLLGFVLTLGASCTYSLILALMQLTFETIIKKH- 236
T+S+ L+ + G + YL+G TLGA+ ++L L +L + +H
Sbjct: 179 TLSSLLLALRHGAGGGGGGADATSPDYLVGVAATLGAALLFALYLPAAELVY-----RHG 233
Query: 237 ---TFSAVLNMQIYTALVATAASVVGLFAS--GEWRSLRGEMNAFRSGQFSYLMTLLWAA 291
F V+ Q+ VATA G+ +S G+W G + +Y + A
Sbjct: 234 GVTGFRMVVEAQVIMEAVATAVGAAGMVSSAGGKW-PWDGVEATWDLSPAAYYAVVGAAV 292
Query: 292 VSWQVANIGVLGLIFEVSALFSNVISTVSLPVIPFFAVVVFHDRMNGVKIVAMLIAIWGF 351
+SWQ+ +G G +F ++L + T L V VVVF D K VAML+ +W F
Sbjct: 293 LSWQLCFLGTAGTVFLTTSLHGGICMTALLAVNVAGGVVVFGDEFGPEKAVAMLLCLWAF 352
Query: 352 ISYLFQHY 359
SY++ Y
Sbjct: 353 SSYVYGEY 360
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,632,221
Number of extensions: 282514
Number of successful extensions: 812
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 788
Number of HSP's successfully gapped: 11
Length of query: 376
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 274
Effective length of database: 11,709,973
Effective search space: 3208532602
Effective search space used: 3208532602
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 157 (65.1 bits)