BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os04g0373000 Os04g0373000|Os04g0373000
         (317 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os04g0373000  Protein of unknown function DUF803 family protein   586   e-168
Os02g0498300  Protein of unknown function DUF803 family protein   377   e-105
Os01g0882300  Protein of unknown function DUF803 family protein   363   e-100
Os05g0424800  Similar to AER274Wp                                 355   2e-98
Os01g0873700  Protein of unknown function DUF803 family protein   337   6e-93
Os05g0430700  Protein of unknown function DUF803 family protein   335   2e-92
Os05g0513400  Protein of unknown function DUF803 family protein   332   2e-91
AK073285                                                          327   8e-90
Os06g0715700  Protein of unknown function DUF803 family protein   302   2e-82
Os11g0197400  Protein of unknown function DUF803 family protein   143   2e-34
>Os04g0373000 Protein of unknown function DUF803 family protein
          Length = 317

 Score =  586 bits (1511), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 292/317 (92%), Positives = 292/317 (92%)

Query: 1   MVMSIDNVRGFALATSSSAFIGSSFVIKKIGLKKAGDAGVRAGSGGYSYLYEPLWWIGMT 60
           MVMSIDNVRGFALATSSSAFIGSSFVIKKIGLKKAGDAGVRAGSGGYSYLYEPLWWIGMT
Sbjct: 1   MVMSIDNVRGFALATSSSAFIGSSFVIKKIGLKKAGDAGVRAGSGGYSYLYEPLWWIGMT 60

Query: 61  AMILGEVXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSV 120
           AMILGEV           ILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSV
Sbjct: 61  AMILGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSV 120

Query: 121 GIVLHAPKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYIAI 180
           GIVLHAPKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYIAI
Sbjct: 121 GIVLHAPKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYIAI 180

Query: 181 CSLMGSLTVISVKAVAIALKLSFNGVNQFIYVPTWXXXXXXXXXXXXXXNYLNKALDSFN 240
           CSLMGSLTVISVKAVAIALKLSFNGVNQFIYVPTW              NYLNKALDSFN
Sbjct: 181 CSLMGSLTVISVKAVAIALKLSFNGVNQFIYVPTWFFIVVVVICCLVQLNYLNKALDSFN 240

Query: 241 TAVVSPVYYVMFTILTIIANMIMYKDWASQNATQIATELCGFVTIVAGTFLLHKTRDMGN 300
           TAVVSPVYYVMFTILTIIANMIMYKDWASQNATQIATELCGFVTIVAGTFLLHKTRDMGN
Sbjct: 241 TAVVSPVYYVMFTILTIIANMIMYKDWASQNATQIATELCGFVTIVAGTFLLHKTRDMGN 300

Query: 301 EQSESSSLRGECELQNH 317
           EQSESSSLRGECELQNH
Sbjct: 301 EQSESSSLRGECELQNH 317
>Os02g0498300 Protein of unknown function DUF803 family protein
          Length = 268

 Score =  377 bits (967), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/243 (76%), Positives = 201/243 (82%)

Query: 59  MTAMILGEVXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVG 118
           M  MILGEV           +LVTPLGALSIIFSAVLAHF+LKE+LHMFG+VGCILCVVG
Sbjct: 1   MITMILGEVANFAAYAFAPAVLVTPLGALSIIFSAVLAHFVLKEKLHMFGVVGCILCVVG 60

Query: 119 SVGIVLHAPKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYI 178
           SVGIVLHAPKE++IDS++EIWHLAT+PGFIVYSC+AVV  L LIFWV  R+  RKML YI
Sbjct: 61  SVGIVLHAPKEREIDSIDEIWHLATEPGFIVYSCVAVVSVLFLIFWVAERSGHRKMLVYI 120

Query: 179 AICSLMGSLTVISVKAVAIALKLSFNGVNQFIYVPTWXXXXXXXXXXXXXXNYLNKALDS 238
           AICS MGSLTVISVKAVAIALKLSF G NQFIY+ TW              NYLNKALDS
Sbjct: 121 AICSTMGSLTVISVKAVAIALKLSFGGSNQFIYIQTWFFIVVVIVCCLVQLNYLNKALDS 180

Query: 239 FNTAVVSPVYYVMFTILTIIANMIMYKDWASQNATQIATELCGFVTIVAGTFLLHKTRDM 298
           FNTAVVSPVYYVMFTILTI ANMIMYKD  S+NATQIAT+LCGFVTIVAGTFLLHKTRDM
Sbjct: 181 FNTAVVSPVYYVMFTILTIFANMIMYKDSFSRNATQIATQLCGFVTIVAGTFLLHKTRDM 240

Query: 299 GNE 301
           GNE
Sbjct: 241 GNE 243
>Os01g0882300 Protein of unknown function DUF803 family protein
          Length = 360

 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/307 (59%), Positives = 229/307 (74%)

Query: 3   MSIDNVRGFALATSSSAFIGSSFVIKKIGLKKAGDAGVRAGSGGYSYLYEPLWWIGMTAM 62
           MS DN++G  LA SSS FIG+SF++KK GLKKAG +GVRAG GGYSYLYEPLWW GM  M
Sbjct: 22  MSADNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGVRAGVGGYSYLYEPLWWAGMITM 81

Query: 63  ILGEVXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSVGI 122
           I+GEV           ILVTPLGALSII SAVLA  +LKE+LH+FGI+GC+LCVVGS  I
Sbjct: 82  IVGEVANFAAYAFAPAILVTPLGALSIIISAVLADIMLKEKLHIFGILGCVLCVVGSTTI 141

Query: 123 VLHAPKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYIAICS 182
           VLHAP+E++IDSV E+W LAT+P F+ Y+   +    +LIF  + +  Q  ++ YI +CS
Sbjct: 142 VLHAPQEREIDSVAEVWALATEPAFLFYAVTVLAATFVLIFRFIPQYGQTHIMVYIGVCS 201

Query: 183 LMGSLTVISVKAVAIALKLSFNGVNQFIYVPTWXXXXXXXXXXXXXXNYLNKALDSFNTA 242
           L+GSL+V+SVKA+ IALKL+F+G+NQ IY  TW              NYLNKALD+FNTA
Sbjct: 202 LVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWMFTIVVVACILTQMNYLNKALDTFNTA 261

Query: 243 VVSPVYYVMFTILTIIANMIMYKDWASQNATQIATELCGFVTIVAGTFLLHKTRDMGNEQ 302
           VVSP+YY MFT LTI+A++IM+KDW  QN TQI TE+CGFVTI++GTFLLHKT+DM +  
Sbjct: 262 VVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVTILSGTFLLHKTKDMVDGL 321

Query: 303 SESSSLR 309
             +  +R
Sbjct: 322 PPTLPIR 328
>Os05g0424800 Similar to AER274Wp
          Length = 358

 Score =  355 bits (911), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 184/307 (59%), Positives = 232/307 (75%)

Query: 3   MSIDNVRGFALATSSSAFIGSSFVIKKIGLKKAGDAGVRAGSGGYSYLYEPLWWIGMTAM 62
           MS DNV+G  LA SSS FIG+SF++KK GLKKAG +GVRAG GGYSYL EPLWW GMTAM
Sbjct: 13  MSADNVKGLLLALSSSLFIGASFIVKKKGLKKAGASGVRAGVGGYSYLLEPLWWAGMTAM 72

Query: 63  ILGEVXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSVGI 122
           I+GE+           ILVTPLGALSII SAVLAH IL+E+LH+FGI+GCILCVVGS  I
Sbjct: 73  IVGEIANFAAYAFAPAILVTPLGALSIIISAVLAHIILREKLHIFGILGCILCVVGSTSI 132

Query: 123 VLHAPKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYIAICS 182
           VLHAP E++I+SV E+W LAT+P F++Y+ + +  A +LIF  V +  Q  ++ YI +CS
Sbjct: 133 VLHAPPERQIESVAEVWDLATEPAFLLYAAIVLAAAFVLIFHFVPQYGQTHIMVYIGVCS 192

Query: 183 LMGSLTVISVKAVAIALKLSFNGVNQFIYVPTWXXXXXXXXXXXXXXNYLNKALDSFNTA 242
           L+GSL+V+SVKA+ IALKL+F+G+NQ +Y   W              NYLNKALD+FNTA
Sbjct: 193 LVGSLSVMSVKALGIALKLTFSGMNQLVYPQMWVFLLFVVACIVTQMNYLNKALDTFNTA 252

Query: 243 VVSPVYYVMFTILTIIANMIMYKDWASQNATQIATELCGFVTIVAGTFLLHKTRDMGNEQ 302
           VVSP+YY MFT LTI+A++IM+KDW  Q+ TQI TE+CGFVTI++GTFLLHKT+DM +  
Sbjct: 253 VVSPIYYTMFTSLTILASVIMFKDWDRQDPTQIVTEMCGFVTILSGTFLLHKTKDMVDGL 312

Query: 303 SESSSLR 309
             +  +R
Sbjct: 313 PPNLPIR 319
>Os01g0873700 Protein of unknown function DUF803 family protein
          Length = 363

 Score =  337 bits (865), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 162/302 (53%), Positives = 216/302 (71%), Gaps = 2/302 (0%)

Query: 7   NVRGFALATSSSAFIGSSFVIKKIGLKKAGDAGVRAGSGGYSYLYEPLWWIGMTAMILGE 66
           N++G  LA +SSAFIG SF++KK GL +AG AG RAG GGY YL EPLWW+GM  M++GE
Sbjct: 23  NLKGSLLAVASSAFIGVSFIVKKKGLLRAGAAGSRAGVGGYGYLLEPLWWVGMVTMLVGE 82

Query: 67  VXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSVGIVLHA 126
           +           +LVTPLGALSII SAVLAHF L E+L   G++GC+LC+VGS  I+LHA
Sbjct: 83  IANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTLNEKLQRVGVLGCVLCIVGSTVIILHA 142

Query: 127 PKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYIAICSLMGS 186
           P+E+   SV+EIWHLA QP F+ Y+  AV V+L L+ +   R  Q  ++ Y+ ICS++GS
Sbjct: 143 PQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLFLMIYCAPRYGQMNIMVYVGICSVIGS 202

Query: 187 LTVISVKAVAIALKLSFNGVNQFIYVPTWXXXXXXXXXXXXXXNYLNKALDSFNTAVVSP 246
           LTV+S+KAV IA+KL+  G+NQ  Y  TW               YLNKALD+FN AVVSP
Sbjct: 203 LTVMSIKAVGIAIKLTIEGINQAGYFQTWLFAVISITCIAVQLVYLNKALDTFNAAVVSP 262

Query: 247 VYYVMFTILTIIANMIMYKDWASQNATQIATELCGFVTIVAGTFLLHKTRDMGNEQSESS 306
           +YY MFT LTI+A+ IM+KDW+ Q+A++IA+E+CGF+T++AGT +LH TR+   +Q+ S+
Sbjct: 263 IYYAMFTTLTILASAIMFKDWSGQSASKIASEICGFLTVLAGTLVLHSTRE--PDQTLSA 320

Query: 307 SL 308
            L
Sbjct: 321 DL 322
>Os05g0430700 Protein of unknown function DUF803 family protein
          Length = 355

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 164/302 (54%), Positives = 215/302 (71%), Gaps = 2/302 (0%)

Query: 7   NVRGFALATSSSAFIGSSFVIKKIGLKKAGDAGVRAGSGGYSYLYEPLWWIGMTAMILGE 66
           N++G  LA +SSAFIG SF++KK GL++AG AG RAG GGY YL EPLWW+GM  M++GE
Sbjct: 16  NLKGSLLAVASSAFIGVSFIVKKKGLRRAGAAGPRAGVGGYGYLLEPLWWVGMITMLIGE 75

Query: 67  VXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSVGIVLHA 126
           +           +LVTPLGALSII SAVLAHFIL E+L   G++GC+LC+VGS  I+LHA
Sbjct: 76  IANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNEKLQRMGVLGCVLCIVGSTVIILHA 135

Query: 127 PKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYIAICSLMGS 186
           P+E+   SV +IWHLATQP F+ Y   A+VV+LIL+     R  Q  +  YI ICS++GS
Sbjct: 136 PEEETPSSVEQIWHLATQPAFLCYVAFALVVSLILMAHCAPRYGQTNIAVYIGICSVIGS 195

Query: 187 LTVISVKAVAIALKLSFNGVNQFIYVPTWXXXXXXXXXXXXXXNYLNKALDSFNTAVVSP 246
           LTV+S+KAV IA+KL+  G+NQ  Y  TW               YLNKALD+FNTAVVSP
Sbjct: 196 LTVMSIKAVGIAIKLTIEGINQAGYFQTWLFATVSAICIIIQLIYLNKALDTFNTAVVSP 255

Query: 247 VYYVMFTILTIIANMIMYKDWASQNATQIATELCGFVTIVAGTFLLHKTRDMGNEQSESS 306
           +YY MFT LTI+A+ IM+KDW+ Q+ + IA+E+CGF+T+++GT +LH TR+   +Q+ S 
Sbjct: 256 IYYAMFTSLTILASAIMFKDWSGQSISSIASEICGFLTVLSGTVVLHSTREY--DQTISP 313

Query: 307 SL 308
            L
Sbjct: 314 DL 315
>Os05g0513400 Protein of unknown function DUF803 family protein
          Length = 354

 Score =  332 bits (851), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 164/296 (55%), Positives = 213/296 (71%), Gaps = 1/296 (0%)

Query: 3   MSIDNVRGFALATSSSAFIGSSFVIKKIGLKKAGDA-GVRAGSGGYSYLYEPLWWIGMTA 61
           +S DNV+G  LA  SS FIG+SF+IKK GL++A  A G+RAG GGYSYL EPLWW+GM  
Sbjct: 11  LSTDNVKGIVLALLSSGFIGASFIIKKKGLRRAAVASGIRAGVGGYSYLLEPLWWVGMIT 70

Query: 62  MILGEVXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSVG 121
           MI+GEV           +LVTPLGALSII SAVLAHFIL ERLH  G++GC++C+ GSV 
Sbjct: 71  MIVGEVANFVAYAFAPAVLVTPLGALSIIVSAVLAHFILNERLHALGVLGCVMCIAGSVV 130

Query: 122 IVLHAPKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYIAIC 181
           IV+HAP+E++I SV EIW++A QP F++Y    +VV  +L+F       Q  +L Y AIC
Sbjct: 131 IVIHAPQEQEITSVREIWNMAIQPAFLLYVASVIVVVFVLVFHFSPLYGQSNVLIYTAIC 190

Query: 182 SLMGSLTVISVKAVAIALKLSFNGVNQFIYVPTWXXXXXXXXXXXXXXNYLNKALDSFNT 241
           SLMGSL+V+SVKA+  +LKL+F G NQ +Y  TW              NYLNKALD+FNT
Sbjct: 191 SLMGSLSVMSVKALGTSLKLTFEGTNQLVYPETWFFVLIVATCVLTQMNYLNKALDTFNT 250

Query: 242 AVVSPVYYVMFTILTIIANMIMYKDWASQNATQIATELCGFVTIVAGTFLLHKTRD 297
           A+VSP+YYVMFT LTI+A++IM+KDW+ Q+   I +E+CG + +++GT LLH T+D
Sbjct: 251 AIVSPIYYVMFTTLTILASVIMFKDWSGQSLGSITSEICGLIVVLSGTILLHVTKD 306
>AK073285 
          Length = 361

 Score =  327 bits (837), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 157/269 (58%), Positives = 196/269 (72%)

Query: 41  RAGSGGYSYLYEPLWWIGMTAMILGEVXXXXXXXXXXXILVTPLGALSIIFSAVLAHFIL 100
             G GGYSYLYEPLWW+GM  M++GEV           ILVTPLGALSII SA+LAHF+L
Sbjct: 61  EPGVGGYSYLYEPLWWVGMITMVVGEVANFAAYAFAPAILVTPLGALSIIISAILAHFML 120

Query: 101 KERLHMFGIVGCILCVVGSVGIVLHAPKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALI 160
           +++LH+FGI+GCILCVVGS  IVLHAP E++I+SV E+W LAT+P F+ Y  + + +  I
Sbjct: 121 RKKLHIFGILGCILCVVGSTTIVLHAPAEREIESVTEVWDLATEPAFMFYVSVVLAMVAI 180

Query: 161 LIFWVVHRTEQRKMLAYIAICSLMGSLTVISVKAVAIALKLSFNGVNQFIYVPTWXXXXX 220
           L+   V    Q  ++ YI +CSL+GS++V+SVKA+ IALKL+F G NQ IY  TW     
Sbjct: 181 LVCRFVPLYGQTHVMVYIGVCSLVGSISVMSVKALGIALKLTFCGTNQLIYPQTWAFTLV 240

Query: 221 XXXXXXXXXNYLNKALDSFNTAVVSPVYYVMFTILTIIANMIMYKDWASQNATQIATELC 280
                    NYLNKALD+FNTAVVSP+YY MFT LTI+A++IM+KDW  QN TQI TE C
Sbjct: 241 VLSCIVTQMNYLNKALDTFNTAVVSPIYYTMFTSLTILASVIMFKDWDRQNPTQIVTEAC 300

Query: 281 GFVTIVAGTFLLHKTRDMGNEQSESSSLR 309
           GFVTI++GTFLLHKT+DM +  S SSS R
Sbjct: 301 GFVTILSGTFLLHKTKDMADGLSTSSSFR 329
>Os06g0715700 Protein of unknown function DUF803 family protein
          Length = 344

 Score =  302 bits (773), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 159/302 (52%), Positives = 213/302 (70%), Gaps = 3/302 (0%)

Query: 6   DNVRGFALATSSSAFIGSSFVIKKIGLKKAGDAGVRAGSGGYSYLYEPLWWIGMTAMILG 65
           DN  G +LA +SSAFIG+SF++KKIGL +AG  GVRAG GGY+YL EPLWW GM  M+LG
Sbjct: 5   DNTVGLSLAVASSAFIGASFILKKIGLIRAGKGGVRAGGGGYTYLLEPLWWAGMMTMLLG 64

Query: 66  EVXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSVGIVLH 125
           E+           +LVTPLGALSII S+ LAHF+LKERL   G++GC+ C+VGSV +V+H
Sbjct: 65  EIANFVAYTFAPAVLVTPLGALSIIVSSFLAHFVLKERLEKLGVLGCVSCIVGSVIVVIH 124

Query: 126 APKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYIAICSLMG 185
           AP+E   +SV EIW+LA QPGF+ Y+   +VV   L+ +   R  Q  ++ Y+ ICS MG
Sbjct: 125 APQEHMPNSVEEIWNLAIQPGFLTYAVATLVVVAALVLFFEPRYGQTNIMIYLGICSSMG 184

Query: 186 SLTVISVKAVAIALKLSFNGVNQFIYVPTWXXXXXXXXXXXXXXNYLNKALDSFNTAVVS 245
           SLTV+S+KA+ +A+KL+ +G+NQ  Y  TW              NYLNKALD+F+ AVVS
Sbjct: 185 SLTVVSIKAIGVAIKLTLDGMNQVAYPHTWLFVIIAIICVVSQINYLNKALDTFDLAVVS 244

Query: 246 PVYYVMFTILTIIANMIMYKDWASQNATQIATELCGFVTIVAGTFLLHKTRDMGNEQSES 305
           P+YYVMFT LTI+A+ IM+KDWA Q+ + IA+E CG +TI+ GT +LH  ++   E++ S
Sbjct: 245 PIYYVMFTTLTIVASGIMFKDWAGQSFSSIASEFCGLITILTGTIMLHTAKE---EETGS 301

Query: 306 SS 307
           S+
Sbjct: 302 SA 303
>Os11g0197400 Protein of unknown function DUF803 family protein
          Length = 139

 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/128 (57%), Positives = 97/128 (75%)

Query: 62  MILGEVXXXXXXXXXXXILVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSVG 121
           +I+GE+           ILVTPLGALSII SA LAH IL+E+LH FGI+GC+LCVVGS+ 
Sbjct: 2   VIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHAILQEKLHTFGILGCVLCVVGSIT 61

Query: 122 IVLHAPKEKKIDSVNEIWHLATQPGFIVYSCMAVVVALILIFWVVHRTEQRKMLAYIAIC 181
           IVLHAP+E+ IDSV E+W LAT+PGF+ Y+ + V  AL+LI++VV +  Q  ++ YI +C
Sbjct: 62  IVLHAPQERNIDSVREVWDLATEPGFLCYAAIVVAAALVLIYFVVPQHGQTNIMVYIGVC 121

Query: 182 SLMGSLTV 189
           SL+GSLTV
Sbjct: 122 SLLGSLTV 129
  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.326    0.138    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,497,011
Number of extensions: 292174
Number of successful extensions: 853
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 852
Number of HSP's successfully gapped: 10
Length of query: 317
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 216
Effective length of database: 11,762,187
Effective search space: 2540632392
Effective search space used: 2540632392
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 156 (64.7 bits)