BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0792900 Os03g0792900|AK102503
(160 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0792900 Similar to PVPR3 protein 305 1e-83
Os07g0168800 Zinc finger, A20-type domain containing protein 207 2e-54
Os06g0612800 Similar to PVPR3 protein 136 7e-33
Os02g0195600 Zinc finger, A20-type domain containing protein 136 8e-33
Os03g0793000 Zinc finger, A20-type domain containing protein 127 5e-30
Os08g0436400 125 1e-29
Os09g0486500 Multiple stress-responsive zinc-finger protein... 110 6e-25
Os01g0765900 109 9e-25
Os02g0530300 Zinc finger, A20-type domain containing protein 107 3e-24
Os08g0504700 Similar to Multiple stress-responsive zinc-fin... 107 4e-24
Os01g0718000 Zinc finger, A20-type domain containing protein 105 1e-23
Os03g0793300 Similar to Expressed protein (Zinc finger-like... 105 2e-23
Os07g0169500 96 9e-21
Os05g0299700 Similar to Expressed protein (Zinc finger-like... 95 3e-20
>Os03g0792900 Similar to PVPR3 protein
Length = 160
Score = 305 bits (781), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/160 (91%), Positives = 146/160 (91%)
Query: 1 MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXX 60
MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRD
Sbjct: 1 MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVATVVEKK 60
Query: 61 PLASLSSTPLVTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGT 120
PLASLSSTPLVTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGT
Sbjct: 61 PLASLSSTPLVTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGT 120
Query: 121 FCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
FCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI
Sbjct: 121 FCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
>Os07g0168800 Zinc finger, A20-type domain containing protein
Length = 161
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/163 (64%), Positives = 116/163 (71%), Gaps = 5/163 (3%)
Query: 1 MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXX 60
MAQESWK E+EET VHTPEAPILCVNNCGFFGS MT NMCSKCYRD
Sbjct: 1 MAQESWKNESEET-VHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEK 59
Query: 61 PL---ASLSSTPLVTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRC 117
AS S TPL D + + KQ +E PKPPSNRCLSCRKKVGLTGF+CRC
Sbjct: 60 KAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEP-PKPPSNRCLSCRKKVGLTGFQCRC 118
Query: 118 GGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
GGTFCS HRY ++H CTFDYK+ GR+QIAKQNP+V A+KI KI
Sbjct: 119 GGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
>Os06g0612800 Similar to PVPR3 protein
Length = 171
Score = 136 bits (342), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 93/170 (54%), Gaps = 18/170 (10%)
Query: 9 EAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPLASLSST 68
E +ETG PE PILC+NNCGFFGS T NMCSKC+++ + ++
Sbjct: 2 EHKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGG 61
Query: 69 PLVTEVTDGGSGSVADGKQVMEEDTPKP-----PS-------------NRCLSCRKKVGL 110
E G VA + ++ +P PS NRC +CRK+VGL
Sbjct: 62 DSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGL 121
Query: 111 TGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
TGF CRCG +C+MHRY+D H C FDY+ R+ IAK NP+VKA+K+ KI
Sbjct: 122 TGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
>Os02g0195600 Zinc finger, A20-type domain containing protein
Length = 173
Score = 136 bits (342), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 94/179 (52%), Gaps = 34/179 (18%)
Query: 9 EAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPLASLSST 68
E +E G PE PILC+NNCGFFGS T NMCSKC+++ + SS
Sbjct: 2 EHKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKL-------AASSI 54
Query: 69 PLVTEVTDGG-------SGSVADGKQVMEEDT--------------------PKPPSNRC 101
+ DGG SGS A +E T K NRC
Sbjct: 55 DSIVNGCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRC 114
Query: 102 LSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
+CRK+VGLTGF CRCG +C++HRY+D H+C FDY+ R+ IAK NP+VKA+K+ KI
Sbjct: 115 ATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
>Os03g0793000 Zinc finger, A20-type domain containing protein
Length = 169
Score = 127 bits (318), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 1 MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYR----DXXXXXXXXXX 56
MA K +ET + +CV CGFFGS T NMCS+CYR D
Sbjct: 1 MASMKRKCPDDETACGSGAGAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAA 60
Query: 57 XXXXPLASLSSTPL----VTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTG 112
L ++ T ++ V S + NRC +CRKKVGLTG
Sbjct: 61 NSDLELVGVAETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLTG 120
Query: 113 FKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKIT 158
FKCRCGG FC HR+AD+H C FDYK G+EQIAKQNPLV ADK+
Sbjct: 121 FKCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAKQNPLVVADKLA 166
>Os08g0436400
Length = 224
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 83/149 (55%), Gaps = 15/149 (10%)
Query: 23 LCVNNCGFFGSRMTENMCSKCYRDXXXXXX-----------XXXXXXXXPLASLSSTPLV 71
LC + CGFFGS+ T NMCSKCYRD P+A ++ P
Sbjct: 80 LCSSGCGFFGSKETNNMCSKCYRDHLKATSPLFSSSSSPATASTTDITVPIAPATTAP-- 137
Query: 72 TEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSH 131
T G KP NRC++CRKKVGL GF+CRCGGTFCS HR+AD H
Sbjct: 138 TPSLKGKEEEATAAASSSAAAAAKP--NRCVACRKKVGLLGFECRCGGTFCSTHRHADKH 195
Query: 132 KCTFDYKQVGREQIAKQNPLVKADKITKI 160
CTFD+K+ RE+IAK+NPL+ A KITK
Sbjct: 196 ACTFDFKKSDREKIAKENPLIVAPKITKF 224
>Os09g0486500 Multiple stress-responsive zinc-finger protein ISAP1 (Stress-
associated protein 1) (OsISAP1)
Length = 164
Score = 110 bits (274), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 1 MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCY--------RDXXXXXX 52
MAQ KK+ E T + PE LC N+CGF G+ T+N+C C+
Sbjct: 1 MAQRD-KKDQEPTELRAPEI-TLCANSCGFPGNPATQNLCQNCFLAATASTSSPSSLSSP 58
Query: 53 XXXXXXXXPLASL--SSTPLVTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGL 110
P A L PL V + S V + NRC CRK+VGL
Sbjct: 59 VLDKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSA----VNRCSRCRKRVGL 114
Query: 111 TGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
TGF+CRCG FC HRY+D H C++DYK R+ IA+ NP+V+A KI +
Sbjct: 115 TGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF 164
>Os01g0765900
Length = 165
Score = 109 bits (272), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 21 PILCVNNCGFFGSRMTENMCSKCYR-----DXXXXXXXXXXXXXXPLASLSSTPLVTEVT 75
P+LC + CGF+G+ T +MCS CYR + A+ +T VT +
Sbjct: 12 PVLCASGCGFYGNPATLDMCSVCYRQHCLLNGATMATGPSSSVAAASAATVATGAVTSDS 71
Query: 76 DGGSGSVADGKQVMEEDTPKP--------PSNRCLSCRKKVGLTGFKCRCGGTFCSMHRY 127
+ +G ++ P+P P+NRC SC+KKVGL GF CRCG T+C HRY
Sbjct: 72 CSVPSAEVNGAAFSSKNNPEPATVVEKKAPANRCASCKKKVGLLGFACRCGATYCGTHRY 131
Query: 128 ADSHKCTFDYKQVGREQIAKQNPLVKADKIT 158
+ H C FD+K R+ IA+ NPL+K +K+T
Sbjct: 132 PEKHACGFDFKGASRDAIARANPLIKGEKLT 162
>Os02g0530300 Zinc finger, A20-type domain containing protein
Length = 154
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 23 LCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPLASLSSTPLVTEVTDGGSGSV 82
LC NNCGFFGS T ++CSKCYRD ++ +T + + +
Sbjct: 14 LCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSPSSSSCPAFL 73
Query: 83 --ADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQV 140
+ + ++RC SCRK+VGLTGF CRCGGTFC HRY + H C FD+K
Sbjct: 74 PSSTAAEAGVVVAAVAKASRCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAA 133
Query: 141 GREQIAKQNPLVKADKI 157
GR+ IA+ NPL+K DK+
Sbjct: 134 GRDAIARANPLIKGDKL 150
>Os08g0504700 Similar to Multiple stress-responsive zinc-finger protein ISAP1
(Stress- associated protein 1) (OsISAP1)
Length = 170
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 86/172 (50%), Gaps = 14/172 (8%)
Query: 1 MAQESWKKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXX 60
MAQ K E E T + PE LC N+CGF G+ T N+C C+
Sbjct: 1 MAQREKKVE-EPTELRAPEM-TLCANSCGFPGNPATNNLCQNCFLAASASSSSSSAAASP 58
Query: 61 PLASLSSTPLVTEVTDGGSGSVADGKQ-VMEEDTPKPPS-----------NRCLSCRKKV 108
SL P+V + S A V+E T P NRC SCR++V
Sbjct: 59 STTSLPVFPVVEKPRQAVQSSAAAAVALVVERPTAGPVESSSKASRSSSVNRCHSCRRRV 118
Query: 109 GLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
GLTGF+CRCG +C HRY+D H C+FDYK R+ IA++NP+V+A KI +
Sbjct: 119 GLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKIVRF 170
>Os01g0718000 Zinc finger, A20-type domain containing protein
Length = 148
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 75/147 (51%), Gaps = 18/147 (12%)
Query: 21 PILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPLASLSSTPLVTEVTDGGSG 80
P+ C N CGFFGS T +CSKCYR AS S + D
Sbjct: 13 PLPCANGCGFFGSADTRGLCSKCYRQTVMS-----------QASAPSAAAQSAEHDQVVL 61
Query: 81 SVADGKQVMEEDTPKPPS-------NRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKC 133
+G V E P PP +RC +C + VGL GF+CRCG FC HRY+D H C
Sbjct: 62 PAPEGVPVDEGAMPPPPPRHGAKTKSRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDC 121
Query: 134 TFDYKQVGREQIAKQNPLVKADKITKI 160
+DY+ GR+ IA+ NP+V+ DK+ K+
Sbjct: 122 GYDYRGAGRDAIARANPVVRPDKVEKL 148
>Os03g0793300 Similar to Expressed protein (Zinc finger-like protein)
Length = 237
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 52/64 (81%)
Query: 95 KPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKA 154
+P +NRC +CR+KVGLTGFKCRCGGTFC HRYAD H C FDYK GRE IAKQNP+V A
Sbjct: 171 QPEANRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVA 230
Query: 155 DKIT 158
DK+
Sbjct: 231 DKLA 234
>Os07g0169500
Length = 152
Score = 96.3 bits (238), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 30 FFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPLASLS---STPLVTEVTDGGSGSVADGK 86
FFGS T+ +CSKCY+ S L T V SG +G
Sbjct: 24 FFGSAATDGLCSKCYKQQQPQPRHLIGTAAGDSDKTSLKVVADLSTLVIKDNSGVGGEGT 83
Query: 87 QVMEE-DTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQI 145
VM T NRC +CRKKVGL GF CRCGG FC +H C FDYK GRE I
Sbjct: 84 TVMAPPATVTKAKNRCKACRKKVGLLGFPCRCGGMFCG------AHACAFDYKAAGREAI 137
Query: 146 AKQNPLVKADKITKI 160
A+ NPLV A KI KI
Sbjct: 138 ARHNPLVVAPKINKI 152
>Os05g0299700 Similar to Expressed protein (Zinc finger-like protein)
Length = 174
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 53/68 (77%)
Query: 93 TPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLV 152
+P NRC CRK+VGLTGF+CRCG FC HR++++H+C+FDYK GRE+IA+ NP++
Sbjct: 107 SPVLFVNRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVI 166
Query: 153 KADKITKI 160
+A KI KI
Sbjct: 167 RAAKIIKI 174
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.131 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,042,889
Number of extensions: 233470
Number of successful extensions: 557
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 547
Number of HSP's successfully gapped: 14
Length of query: 160
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 67
Effective length of database: 12,179,899
Effective search space: 816053233
Effective search space used: 816053233
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 152 (63.2 bits)