BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0754500 Os03g0754500|Os03g0754500
(218 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0754500 Similar to Phytochelatin synthetase-like prote... 393 e-110
AK102170 377 e-105
Os05g0386800 Similar to Phytochelatin synthetase-like prote... 364 e-101
Os07g0604300 Similar to Phytochelatin synthetase (Fragment) 317 3e-87
Os03g0416300 Similar to Phytochelatin synthetase (Fragment) 290 5e-79
Os10g0497700 Similar to Phytochelatin synthetase 288 3e-78
Os03g0416200 BRITTLE CULM1 281 4e-76
Os04g0540300 Phytochelatin synthetase-like conserved region... 159 1e-39
Os07g0690900 Phytochelatin synthetase-like conserved region... 67 1e-11
Os06g0685100 Similar to COBRA-like protein 10 precursor 65 4e-11
>Os03g0754500 Similar to Phytochelatin synthetase-like protein 2
Length = 218
Score = 393 bits (1010), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 33 TEAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIW 92
TEAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIW
Sbjct: 33 TEAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIW 92
Query: 93 SMVGAQTTEQGDCSKFKGNPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDPL 152
SMVGAQTTEQGDCSKFKGNPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDPL
Sbjct: 93 SMVGAQTTEQGDCSKFKGNPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDPL 152
Query: 153 NAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTNDGRRATQAL 212
NAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTNDGRRATQAL
Sbjct: 153 NAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTNDGRRATQAL 212
Query: 213 SYCSAS 218
SYCSAS
Sbjct: 213 SYCSAS 218
>AK102170
Length = 457
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/180 (100%), Positives = 180/180 (100%)
Query: 33 TEAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIW 92
TEAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIW
Sbjct: 34 TEAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIW 93
Query: 93 SMVGAQTTEQGDCSKFKGNPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDPL 152
SMVGAQTTEQGDCSKFKGNPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDPL
Sbjct: 94 SMVGAQTTEQGDCSKFKGNPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDPL 153
Query: 153 NAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTNDGRRATQAL 212
NAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTNDGRRATQAL
Sbjct: 154 NAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTNDGRRATQAL 213
>Os05g0386800 Similar to Phytochelatin synthetase-like protein 2
Length = 457
Score = 364 bits (934), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/180 (96%), Positives = 175/180 (97%)
Query: 33 TEAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIW 92
TEAYD+LDPNGNITIKWDVM WTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIW
Sbjct: 34 TEAYDALDPNGNITIKWDVMSWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIW 93
Query: 93 SMVGAQTTEQGDCSKFKGNPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDPL 152
SMVGAQTTEQGDCSKFKG PHCCKKDPT+VDLLPGTPYNMQIANCCKAGVINTFNQDP
Sbjct: 94 SMVGAQTTEQGDCSKFKGGTPHCCKKDPTVVDLLPGTPYNMQIANCCKAGVINTFNQDPS 153
Query: 153 NAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTNDGRRATQAL 212
NAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFT DGRRATQAL
Sbjct: 154 NAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTGDGRRATQAL 213
>Os07g0604300 Similar to Phytochelatin synthetase (Fragment)
Length = 446
Score = 317 bits (813), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 141/179 (78%), Positives = 162/179 (90%)
Query: 33 TEAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIW 92
+EAYD LDPNGNITIKWDV+QWTPDGYVAVV+++NYQQ+RHIQ+PGW+LGW WAKKE+IW
Sbjct: 26 SEAYDPLDPNGNITIKWDVLQWTPDGYVAVVSLYNYQQYRHIQSPGWKLGWVWAKKEIIW 85
Query: 93 SMVGAQTTEQGDCSKFKGNPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDPL 152
+M G Q TEQGDCSKFK N PHCCKKDP IVDLLPGTPYNMQIANCCK GV+N++ QDP
Sbjct: 86 AMNGGQATEQGDCSKFKSNIPHCCKKDPEIVDLLPGTPYNMQIANCCKGGVLNSWAQDPA 145
Query: 153 NAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTNDGRRATQA 211
NA +SFQ+SVG AGTTNKTV++P+NFTLK+PGPGYTCG A +VRPTKFF+ DGRR TQA
Sbjct: 146 NAIASFQVSVGQAGTTNKTVRVPRNFTLKSPGPGYTCGSAKVVRPTKFFSQDGRRTTQA 204
>Os03g0416300 Similar to Phytochelatin synthetase (Fragment)
Length = 458
Score = 290 bits (742), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 131/179 (73%), Positives = 152/179 (84%), Gaps = 1/179 (0%)
Query: 34 EAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWS 93
EAYD LDPNGNITIKWD+ QWTPDGYVAVVT++N+Q++RHIQAPGW LGW WAKKE+IWS
Sbjct: 28 EAYDPLDPNGNITIKWDITQWTPDGYVAVVTIYNFQKYRHIQAPGWSLGWAWAKKEIIWS 87
Query: 94 MVGAQTTEQGDCSKFKGNPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDPLN 153
M G Q TEQGDCS FK N PHCCK+DP +VDL+PG PYNMQ NCCK GV+ ++ QDPLN
Sbjct: 88 MAGGQATEQGDCSAFKANIPHCCKRDPRVVDLVPGAPYNMQFGNCCKGGVLTSWVQDPLN 147
Query: 154 AASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVR-PTKFFTNDGRRATQA 211
A +SFQI+VG +GT+NKTVK PKNFTLKAPGPGY+CG A V+ PT+F + DGRR TQA
Sbjct: 148 AVASFQITVGHSGTSNKTVKAPKNFTLKAPGPGYSCGLAQEVKPPTRFISLDGRRTTQA 206
>Os10g0497700 Similar to Phytochelatin synthetase
Length = 425
Score = 288 bits (736), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 133/182 (73%), Positives = 153/182 (84%), Gaps = 2/182 (1%)
Query: 33 TEAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIW 92
T AYDSLDPNGNITIKWDVMQWTPDGY AVVT+ NYQQFRHIQ PGWQLGWTW +KEVIW
Sbjct: 25 TYAYDSLDPNGNITIKWDVMQWTPDGYAAVVTLSNYQQFRHIQPPGWQLGWTWQQKEVIW 84
Query: 93 SMVGAQTTEQGDCSKFK--GNPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQD 150
SM GAQ EQGDCS K N PH CKK PT+VDLLPG P ++QIANCCKAG ++ F+QD
Sbjct: 85 SMYGAQAIEQGDCSMSKEGSNVPHSCKKHPTVVDLLPGAPIDLQIANCCKAGSLSAFSQD 144
Query: 151 PLNAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTNDGRRATQ 210
P N+A+SFQI VG +G +N+TV++PKNF+L APGPGYTC RAMIV+P++F + DGRRATQ
Sbjct: 145 PANSAASFQIIVGHSGNSNETVRVPKNFSLMAPGPGYTCSRAMIVKPSRFLSPDGRRATQ 204
Query: 211 AL 212
L
Sbjct: 205 VL 206
>Os03g0416200 BRITTLE CULM1
Length = 468
Score = 281 bits (718), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 145/178 (81%)
Query: 35 AYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWSM 94
AYD LDP GNITIKWDV+ WTPDGYVA+VTM NYQ +R I APGW +GW+WAKKEVIWS+
Sbjct: 22 AYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQILAPGWTVGWSWAKKEVIWSI 81
Query: 95 VGAQTTEQGDCSKFKGNPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDPLNA 154
VGAQ TEQGDCSKFKG PH CK+ P IVDLLPG PYN QIANCCKAGV++ + QDP +
Sbjct: 82 VGAQATEQGDCSKFKGGIPHSCKRTPAIVDLLPGVPYNQQIANCCKAGVVSAYGQDPAGS 141
Query: 155 ASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTNDGRRATQAL 212
S+FQ+SVGLAGTTNKTVKLP NFTL PGPGYTCG A IV T + T D RR TQAL
Sbjct: 142 VSAFQVSVGLAGTTNKTVKLPTNFTLAGPGPGYTCGPATIVPSTVYLTPDRRRRTQAL 199
>Os04g0540300 Phytochelatin synthetase-like conserved region family protein
Length = 372
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 107/172 (62%), Gaps = 9/172 (5%)
Query: 34 EAYDSLDPNGNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWS 93
+AYD +DPNGNI I WD Q + Y +V++ N+Q +RHI+ PGW+L W WA E+IW
Sbjct: 21 DAYDPVDPNGNIIINWD-FQSIENVYTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIWG 79
Query: 94 MVGAQTTEQGDCSKFKG-NPPHCCKKDPTIVDLLPGTPYNMQIANCCKAGVINTFNQDPL 152
M GA+ TEQGDC + +G PHCC+K P IVDL PGTPYN Q+++CC+ GV+++ Q+
Sbjct: 80 MTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNR 139
Query: 153 NAASSFQISVG-----LAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTK 199
+ ++FQ+ VG ++ LP F + PGY+C A V T
Sbjct: 140 TSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGV--PGYSCSNATKVNATS 189
>Os07g0690900 Phytochelatin synthetase-like conserved region family protein
Length = 675
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 43 GNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWSMVGAQTTEQ 102
G++ I +DV+Q Y+A VT+ N + GW+L W W + E I SM GA +
Sbjct: 229 GDLVITYDVLQAHETTYLAQVTLENDALLGRLD--GWELSWEWLRGEFISSMRGAYPRQV 286
Query: 103 G--DC------SKFKG---NPPHCCKKDPTIVDLLPGTPYNMQIA---NCCKAGVINTFN 148
G DC + +KG + C + P ++DL P + I +CC+ G + +
Sbjct: 287 GATDCVYGAQGAFYKGLDFSKVLNCDRKPAVLDLPPSRRGDEDIGGIDHCCRNGTMLPKS 346
Query: 149 QDPLNAASSFQISV-GLAGTTNKT-VKLPKNFTLKAPG---PGYTCGRAMIVRPTKFFTN 203
D + S+FQ+ V + N+T + P NF + P Y CG+ + V PT+
Sbjct: 347 VDAAQSKSAFQMEVYKMPPDLNRTKLYAPANFRVSGASPLNPEYACGQPVRVTPTELPDP 406
Query: 204 DGRRAT 209
G +T
Sbjct: 407 SGLAST 412
>Os06g0685100 Similar to COBRA-like protein 10 precursor
Length = 683
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 43 GNITIKWDVMQWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWSMVGAQTTEQ 102
++TI +DV+Q + Y+ VT+ N+ + W L W W + E I+ M GA T +
Sbjct: 228 ADLTIAYDVLQAFGNNYMVQVTIDNWSPIGRLD--NWNLTWEWKRGEFIYKMRGAYTLNK 285
Query: 103 -----------GDCSKFKGNPPHCCKKDPTIVDLLPGTPYNMQIAN---CCKAGVINTFN 148
G F P + C+K P +VDL P + + N CCK G +
Sbjct: 286 EGPACVYSPAAGYYKDFDFTPAYSCEKRPIVVDLPPEREKDKDVGNIPFCCKNGTLLPPT 345
Query: 149 QDPLNAASSFQISV-GLAGTTNKTVKL-PKNFTLKAP-GPGYTCGRAMIVRPTKF 200
D + + FQ+ V L N+T P+N+ + P Y C + + V P F
Sbjct: 346 MDESKSRAVFQMQVFKLPPDLNRTALYPPQNWKIIGKLNPQYACRQPVRVSPVVF 400
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.133 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,352,471
Number of extensions: 303587
Number of successful extensions: 543
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 537
Number of HSP's successfully gapped: 10
Length of query: 218
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 121
Effective length of database: 11,971,043
Effective search space: 1448496203
Effective search space used: 1448496203
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)