Os07g0604300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phytochelatin synthetase (Fragment).
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Os07g0604300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phytochelatin synthetase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.04 | 0.687 | 6.3 | 0.375 | 0.488 | -1.01 | 0.727 | 4.08 | -1.28 | 7.26 | 63 | 6 | -- | -- |
| 252.33 | 0.74 | 6.32 | 0.534 | 0.465 | -1.22 | 2.97 | -- | -1.27 | 3.83 | 62.2 | 2 | -- | -- |
| 215.16 | 0.688 | 6.31 | 0.384 | 0.492 | -1.02 | -- | 4.01 | -1.29 | 7 | 63.66 | 5 | -- | -- |
| 269.38 | 0.764 | 6.31 | 0.525 | 0.507 | -0.899 | -- | -- | -1.26 | 7.22 | 63.01 | 2 | -- | -- |
| 227.25 | 0.706 | 6.32 | 0.396 | -- | -0.926 | -- | 4.1 | -1.27 | -- | 62.4 | 5 | -- | -- |
| 270.83 | 0.772 | 6.3 | 0.603 | 0.69 | -- | -2 | -- | -1.18 | 12.6 | -- | -- | -- | -- |
| 286.19 | 0.792 | 6.3 | 0.522 | 0.715 | -- | -- | -- | -1.2 | 11.6 | -- | -- | -- | -- |
| 282.3 | 0.783 | 6.32 | 0.534 | -- | -0.827 | -- | -- | -1.24 | -- | 62 | 2 | -- | -- |
| 276.74 | 0.775 | 6.32 | -- | 0.504 | -0.9 | -- | -- | -1.31 | 7.25 | 62.23 | 2 | -- | -- |
| 318.33 | 0.834 | 6.31 | 0.503 | -- | -- | -- | -- | -1.21 | -- | -- | -- | -- | -- |
| 293.37 | 0.801 | 6.31 | -- | 0.71 | -- | -- | -- | -1.26 | 11.5 | -- | -- | -- | -- |
| 289.77 | 0.795 | 6.34 | -- | -- | -0.817 | -- | -- | -1.3 | -- | 62 | 2 | -- | -- |
| 324.99 | 0.841 | 6.33 | -- | -- | -- | -- | -- | -1.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 213.31 | humidity | 60 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 4 | 214.27 | humidity | 70 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 7 | 214.93 | humidity | 60 | 10 | > th | dose dependent | no | NA | NA |
| 9 | 215.10 | humidity | 60 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 10 | 215.36 | humidity | 60 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 20 | 216.58 | humidity | 60 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 22 | 216.88 | humidity | 60 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 24 | 217.08 | humidity | 60 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 41 | 217.75 | humidity | 90 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 64 | 218.80 | humidity | 70 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 69 | 219.15 | humidity | 90 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 70 | 219.16 | humidity | 90 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 75 | 219.22 | humidity | 90 | 10 | < th | dose dependent | rect. | 2 | 23 |
| 83 | 219.35 | humidity | 90 | 10 | < th | dose dependent | no | NA | NA |
| 96 | 219.62 | humidity | 90 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 97 | 219.64 | humidity | 90 | 10 | < th | dose dependent | rect. | 6 | 19 |
| 106 | 219.83 | humidity | 90 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 152 | 220.58 | humidity | 90 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 172 | 220.83 | humidity | 90 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 177 | 220.88 | humidity | 70 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 213 | 221.21 | humidity | 90 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 264 | 221.66 | humidity | 90 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 353 | 222.50 | humidity | 90 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 405 | 222.94 | humidity | 90 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 459 | 223.79 | humidity | 90 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 553 | 225.26 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 565 | 225.40 | humidity | 90 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 569 | 225.52 | humidity | 80 | 270 | > th | dose independent | rect. | 22 | 23 |
| 693 | 226.78 | humidity | 80 | 270 | > th | dose independent | rect. | 8 | 22 |
| 847 | 228.61 | humidity | 90 | 10 | < th | dose dependent | sin | 0 | NA |
| 877 | 228.84 | humidity | 70 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 917 | 229.30 | humidity | 80 | 270 | < th | dose independent | rect. | 19 | 23 |
| 951 | 229.61 | humidity | 80 | 270 | > th | dose independent | no | NA | NA |
| 966 | 229.72 | humidity | 90 | 270 | < th | dose dependent | sin | 23 | NA |
| 969 | 229.74 | humidity | 80 | 270 | > th | dose independent | rect. | 19 | 23 |
| 987 | 229.86 | humidity | 60 | 10 | > th | dose dependent | sin | 3 | NA |