Os10g0497700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phytochelatin synthetase.
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Os10g0497700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phytochelatin synthetase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 353.19 | 0.883 | 6.78 | -0.793 | 0.44 | 6.2 | -1.06 | -13.2 | -0.921 | 16.1 | 0.2277 | 642 | 16 | 2.07 |
| 356.09 | 0.879 | 6.69 | -0.442 | 0.255 | 4.71 | -1.9 | -- | -0.94 | 15.5 | 0.4624 | 409 | 15.9 | 2.3 |
| 356.37 | 0.879 | 6.78 | -0.804 | 0.439 | 6.14 | -- | -13 | -0.927 | 16.3 | 0.1922 | 643 | 16 | 2.08 |
| 356.5 | 0.879 | 6.72 | -0.517 | 0.361 | 3.79 | -- | -- | -0.938 | 16.4 | 0.1916 | 416 | 16.1 | 2.05 |
| 364.08 | 0.889 | 6.77 | -0.737 | -- | 6.42 | -- | -12.4 | -0.945 | -- | 0.3755 | 521 | 16 | 2.19 |
| 421.15 | 0.962 | 6.73 | -0.31 | 0.463 | -- | -0.941 | -- | -0.979 | 16.7 | -- | -- | -- | -- |
| 422.35 | 0.962 | 6.74 | -0.317 | 0.485 | -- | -- | -- | -0.984 | 17.8 | -- | -- | -- | -- |
| 363.45 | 0.888 | 6.72 | -0.536 | -- | 3.91 | -- | -- | -0.948 | -- | 0.211 | 414 | 16.2 | 1.98 |
| 363.57 | 0.888 | 6.72 | -- | 0.373 | 3.7 | -- | -- | -0.913 | 16.4 | 0.2975 | 416 | 16.1 | 2.07 |
| 434.53 | 0.974 | 6.73 | -0.332 | -- | -- | -- | -- | -0.996 | -- | -- | -- | -- | -- |
| 424.99 | 0.964 | 6.73 | -- | 0.49 | -- | -- | -- | -0.949 | 17.8 | -- | -- | -- | -- |
| 370.79 | 0.897 | 6.71 | -- | -- | 3.71 | -- | -- | -0.891 | -- | 0.2844 | 415 | 16 | 2.05 |
| 437.42 | 0.976 | 6.72 | -- | -- | -- | -- | -- | -0.959 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 355.89 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 16 | 2 |
| 2 | 355.91 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 7 | 6 |
| 7 | 356.53 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 27 | 357.17 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 31 | 357.22 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 35 | 357.32 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 36 | 357.34 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 48 | 357.71 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 16 | 2 |
| 50 | 357.73 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 21 | 15 |
| 78 | 358.34 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 13 | 5 |
| 84 | 358.39 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 85 | 358.41 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 92 | 358.52 | humidity | 70.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 98 | 358.61 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 105 | 358.72 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 11 | 5 |
| 107 | 358.77 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 109 | 358.82 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 6 | 10 |
| 117 | 358.90 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 16 | 17 |
| 127 | 359.01 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 8 |
| 135 | 359.10 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 7 | 11 |
| 140 | 359.17 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 13 |
| 144 | 359.17 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 21 | 19 |
| 145 | 359.18 | humidity | 70.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 164 | 359.26 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 172 | 359.30 | radiation | 10.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 176 | 359.36 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 208 | 359.59 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 210 | 359.61 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 241 | 359.92 | radiation | 10.0 | 43200 | < th | dose dependent | sin | 2 | NA |
| 288 | 360.09 | radiation | 20.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 298 | 360.11 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 7 | 13 |
| 304 | 360.13 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 11 | 22 |
| 313 | 360.18 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 16 |
| 314 | 360.18 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 21 |
| 363 | 360.32 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 20 | 18 |
| 466 | 360.56 | radiation | 20.0 | 43200 | < th | dose dependent | no | NA | NA |
| 532 | 360.71 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 544 | 360.76 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 546 | 360.77 | radiation | 10.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 548 | 360.78 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 15 | 19 |
| 550 | 360.79 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 567 | 360.81 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 588 | 360.93 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 592 | 360.95 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 607 | 361.03 | humidity | 80.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 613 | 361.06 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 649 | 361.12 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 688 | 361.25 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 14 |
| 708 | 361.34 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 770 | 361.40 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 774 | 361.41 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 818 | 361.48 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 831 | 361.51 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 832 | 361.51 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 834 | 361.51 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 836 | 361.52 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 877 | 361.58 | radiation | 20.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 881 | 361.58 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 897 | 361.62 | radiation | 30.0 | 43200 | > th | dose independent | sin | 12 | NA |