BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0692700 Os03g0692700|AK060462
(174 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0692700 Similar to Pherophorin-S precursor 263 5e-71
Os07g0548800 Protein of unknown function DUF538 family protein 85 3e-17
Os01g0595400 Protein of unknown function DUF538 family protein 82 2e-16
Os01g0913100 Protein of unknown function DUF538 family protein 73 1e-13
Os03g0693400 Protein of unknown function DUF538 family protein 71 3e-13
Os11g0241832 69 2e-12
Os05g0362300 Protein of unknown function DUF538 family protein 68 4e-12
Os05g0421100 Protein of unknown function DUF538 family protein 65 2e-11
Os05g0221200 Similar to 2o545-prov protein 65 3e-11
Os05g0362500 Virulence factor, pectin lyase fold family pro... 65 3e-11
>Os03g0692700 Similar to Pherophorin-S precursor
Length = 174
Score = 263 bits (672), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/174 (77%), Positives = 134/174 (77%)
Query: 1 MAMSPLTTIXXXXXXXXXXXXXXXXXXXXPLHGIANDLLPEYGLPRGLIPETIASYTFDN 60
MAMSPLTTI PLHGIANDLLPEYGLPRGLIPETIASYTFDN
Sbjct: 1 MAMSPLTTILLLAAAVGATCATSATASAAPLHGIANDLLPEYGLPRGLIPETIASYTFDN 60
Query: 61 DTGDFEIRLTSTCYIWFGSHLAYFEDAIRGRIAYGTITGLSGIQAQKFFVWVSITTIVAH 120
DTGDFEIRLTSTCYIWFGSHLAYFEDAIRGRIAYGTITGLSGIQAQKFFVWVSITTIVAH
Sbjct: 61 DTGDFEIRLTSTCYIWFGSHLAYFEDAIRGRIAYGTITGLSGIQAQKFFVWVSITTIVAH 120
Query: 121 PDQGTVEFRAGFISEALPESDFAEVPVCXXXXXXXXXXXXXXXXXXXXPTVAEA 174
PDQGTVEFRAGFISEALPESDFAEVPVC PTVAEA
Sbjct: 121 PDQGTVEFRAGFISEALPESDFAEVPVCGAGARLRGAAGLARQLGLQLPTVAEA 174
>Os07g0548800 Protein of unknown function DUF538 family protein
Length = 202
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
Query: 36 NDLLPEYGLPRGLIPETIASYTFDNDTGDFEIRLTSTCYIWFGS-HLAYFEDAIRGRIAY 94
++LL +GLP GL+P + SY+ D G E RL++ CY + LA+F+ +RG +++
Sbjct: 46 HELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNLSF 105
Query: 95 GTITGLSGIQAQKFFVWVSITTI-VAHPDQGTVEFRAGFISEALPESDFAEVPVC 148
G + G+ G+ ++ FVW+ + I VA P G + F G+ + L S F E P C
Sbjct: 106 GALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFEEPPDC 160
>Os01g0595400 Protein of unknown function DUF538 family protein
Length = 160
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 35 ANDLLPEYGLPRGLIPETIASYTFDNDTGDFEIRLTSTCYIWF--GSHLAYFEDAIRGRI 92
A D L G P GL+P + YT D+ +GDF + L S+C I GS+LA F D + GR+
Sbjct: 41 AYDELRHRGFPLGLLPANVRGYTLDSGSGDFAVDLASSCRIVLPAGSYLASFSDRLTGRL 100
Query: 93 AYGTITGLSGIQAQKFFVWVSITTIVAHPDQGTVEFRAGFISEALPESDFAEVPVC 148
I+GLSGI+ + FF W SIT I A D+ + F G +S P F C
Sbjct: 101 DDRRISGLSGIRVRAFFRWWSITGIRADGDE--LVFEVGSVSAKFPARHFNASLEC 154
>Os01g0913100 Protein of unknown function DUF538 family protein
Length = 171
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 36 NDLLPEYGLPRGLIPETIASYTFDNDTGDFEIRLTSTCYIWFGSHLAYFEDAIRGRIAYG 95
+++L +GLPRGL+P IA + D +G FE L +C F L Y + G I+YG
Sbjct: 34 HEVLRAHGLPRGLLPAGIADFRHDEGSGRFEAALGESCTAQFEVGLRY-NATVAGVISYG 92
Query: 96 TITGLSGIQAQKFFVWVSITTI-VAHPDQGTVEFRAGFISEALPESDFAEVPVC 148
I LSG+ AQ F+W + I V P G + F G + + P + F P C
Sbjct: 93 RIASLSGVSAQDLFLWFPVRGIRVDVPSSGVIYFDVGVVFKHFPLAVFEAPPPC 146
>Os03g0693400 Protein of unknown function DUF538 family protein
Length = 177
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 36 NDLLPEYGLPRGLIPETIASYTFDNDTGDFEIRLTSTCYIWFGSHLAYFEDAIRGRIAYG 95
+++LP YGLP GL P ++ +++ + G + L CY + +L YFE + G + YG
Sbjct: 39 SEILPRYGLPPGLFPASVTAFSLAAN-GSLAVDLGGPCYAHY-EYLTYFEPRVTGVLRYG 96
Query: 96 TITGLSGIQAQKFFVWVSITTIVAH--PDQGTVEFRAGFISEALPESDFAEVPVC 148
++TGLSG++ ++F VW + + P V G+I+ LP +F C
Sbjct: 97 SLTGLSGVKVRRFLVWFDVVRVKVDLPPPPRYVYLDIGWITRKLPADEFESPHEC 151
>Os11g0241832
Length = 184
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 37 DLLPEYGLPRGLIPETIASYTFDNDTGDFEIRLTSTCYIWFGSHLAYFEDAIRGRIAYGT 96
++L +YG P G++P YT D G F++ L C + + + I G + G+
Sbjct: 74 EMLGKYGFPPGILPAGAQGYTLDAGDGSFQVTLPGDCVVDVQGYKLRYRSNIYGNVRAGS 133
Query: 97 ITGLSGIQAQKFFVWVSITTIVAHPDQGTVEFRAGFISEALPESDFAEVPVC 148
I GL G+ + VWV I + A D G V F A IS++ P F P C
Sbjct: 134 IDGLDGVSVKIAIVWVGIHDVEA--DGGDVTFHASAISKSSPADGFQTSPSC 183
>Os05g0362300 Protein of unknown function DUF538 family protein
Length = 173
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 35 ANDLLPEYGLPRGLIPETIASYTFDNDTGDFEIRL--TSTC-YIWFGSHLAYFEDAIRGR 91
A + L + P G++P+ + SYT D+ TGDF L TSTC + GS+ ++ + GR
Sbjct: 30 AYEALATFDFPPGILPKGVVSYTLDDATGDFTATLNTTSTCAFSIQGSYSLRYQRRLSGR 89
Query: 92 IAYGTITGLSGIQAQKFFVWVSITTIVAHPDQGTVEFRAGFISEALPESDFAEVPVC 148
IA +T L G+ + F+WV+I + H D+ + F G S +F E P C
Sbjct: 90 IAADRLTNLQGVSVKILFLWVNIVEVTRHGDE--LGFSVGIASADFGIDNFLESPQC 144
>Os05g0421100 Protein of unknown function DUF538 family protein
Length = 190
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 35 ANDLLPEYGLPRGLIPETIASYTFDNDTGDFEIRL-TSTCYIWF-GSHLAYFEDAIRGRI 92
A ++L +G PRG++PE + YT G+F + L T C G + ++ I GR+
Sbjct: 60 AYEMLERFGFPRGILPEGVTGYTLRPSDGEFAVYLGTGECEFEVDGGYRLTYQGRITGRV 119
Query: 93 AYGTITGLSGIQAQKFFV-WVSITTIVAHPDQGTVEFRAGFISEALPESDFAEVPVC 148
A G+ITGL G+ + F + W +VA D + F G +S+A P F E P C
Sbjct: 120 AGGSITGLRGVTVRVFMMNWGIDRVVVADADH--LVFYVGPLSQAFPVDGFEESPQC 174
>Os05g0221200 Similar to 2o545-prov protein
Length = 195
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 36 NDLLPEYGLPRGLIPETIASYTFDNDTGDFEIRLTSTCYIWFGSHLAYFEDAIRGRIAYG 95
+++L YGLP G+ P +I ++T + G + L CY + +L YFE + G + YG
Sbjct: 62 SEILLRYGLPPGVFPTSITAFTLAAN-GSLAVDLQGPCYSHY-EYLTYFEARVVGLLRYG 119
Query: 96 TITGLSGIQAQKFFVWVSITTIVAH--PDQGTVEFRAGFISEALPESDFAEVPVC 148
++T LSG++ ++F VW + + P V G+I+ LP +F C
Sbjct: 120 SLTDLSGVKVRRFLVWFDVIRVKVDLPPPPHYVYLDIGWITRKLPADEFESPHKC 174
>Os05g0362500 Virulence factor, pectin lyase fold family protein
Length = 182
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 12/124 (9%)
Query: 35 ANDLLPEYGLPRGLIPETIASYTFDNDTGDFEIRLTS---------TC-YIWFGSHLAYF 84
A ++L Y P G++P+ + SYT + TGDF L + TC + GS+ +
Sbjct: 29 AYEVLESYDFPVGILPKGVTSYTLEATTGDFTATLDTGDDDDSSSSTCEFAIEGSYSLRY 88
Query: 85 EDAIRGRIAYGTITGLSGIQAQKFFVWVSITTIVAHPDQGTVEFRAGFISEALPESDFAE 144
+ AI GRIA G +T L G+ + F W++I + D+ +EF G S +F E
Sbjct: 89 QRAITGRIATGHLTDLRGVAVKVLFFWLNIVEVTRRGDR--LEFSVGIASADFTVDNFLE 146
Query: 145 VPVC 148
P C
Sbjct: 147 SPQC 150
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,457,253
Number of extensions: 161311
Number of successful extensions: 289
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 284
Number of HSP's successfully gapped: 10
Length of query: 174
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 80
Effective length of database: 12,127,685
Effective search space: 970214800
Effective search space used: 970214800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 152 (63.2 bits)