Os05g0421100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF538 family protein.
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Os05g0421100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF538 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.58 | 0.652 | 7.77 | 0.622 | 1.73 | 2.11 | -1.23 | -0.289 | -0.362 | 11.4 | 22.37 | 2115 | -- | -- |
| 192.17 | 0.646 | 7.78 | 0.57 | 1.73 | 2.16 | -1.25 | -- | -0.376 | 11.4 | 22.3 | 2112 | -- | -- |
| 198.53 | 0.656 | 7.77 | 0.625 | 1.75 | 2.15 | -- | -0.345 | -0.362 | 11.3 | 22.28 | 2108 | -- | -- |
| 198.94 | 0.657 | 7.79 | 0.546 | 1.73 | 2.16 | -- | -- | -0.385 | 11.3 | 22.3 | 2106 | -- | -- |
| 373.75 | 0.9 | 7.7 | 1.32 | -- | 2.46 | -- | -1.75 | 0.0158 | -- | 23.8 | 2315 | -- | -- |
| 359.82 | 0.889 | 7.95 | -0.309 | 1.89 | -- | -1.27 | -- | -1.14 | 11.3 | -- | -- | -- | -- |
| 366.72 | 0.897 | 7.95 | -0.362 | 1.9 | -- | -- | -- | -1.15 | 11.3 | -- | -- | -- | -- |
| 351.25 | 0.873 | 7.84 | 0.51 | -- | 2.44 | -- | -- | -0.414 | -- | 21.9 | 877 | -- | -- |
| 204.66 | 0.666 | 7.81 | -- | 1.75 | 1.99 | -- | -- | -0.482 | 11.3 | 22.34 | 2078 | -- | -- |
| 592.62 | 1.14 | 8 | -0.409 | -- | -- | -- | -- | -1.17 | -- | -- | -- | -- | -- |
| 370.17 | 0.9 | 7.94 | -- | 1.9 | -- | -- | -- | -1.11 | 11.3 | -- | -- | -- | -- |
| 352.3 | 0.874 | 7.84 | -- | -- | 2.23 | -- | -- | -0.464 | -- | 22.3 | 869 | -- | -- |
| 597.04 | 1.14 | 7.99 | -- | -- | -- | -- | -- | -1.12 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 202.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 19 | 203.30 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 20 | 203.34 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 105 | 205.22 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 123 | 205.44 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 167 | 205.94 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 169 | 205.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 271 | 206.75 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 283 | 206.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 315 | 206.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 345 | 207.03 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 424 | 207.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 10 |
| 545 | 207.89 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 676 | 208.37 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 961 | 209.50 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |