BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0421100 Os05g0421100|Os05g0421100
(190 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02816.1 | chr1:621637-622137 FORWARD LENGTH=167 100 4e-22
AT4G02360.1 | chr4:1041179-1041643 FORWARD LENGTH=155 97 7e-21
AT4G02370.1 | chr4:1042458-1042961 FORWARD LENGTH=168 93 7e-20
AT1G02813.1 | chr1:620773-621222 FORWARD LENGTH=150 83 1e-16
AT5G19590.1 | chr5:6611614-6612069 REVERSE LENGTH=152 79 2e-15
AT5G19860.1 | chr5:6714533-6715837 REVERSE LENGTH=182 79 2e-15
AT1G55265.1 | chr1:20617326-20617853 FORWARD LENGTH=176 60 1e-09
AT3G07470.1 | chr3:2387291-2388343 REVERSE LENGTH=170 55 2e-08
AT5G54530.1 | chr5:22152781-22154201 FORWARD LENGTH=162 52 2e-07
AT3G07460.2 | chr3:2384544-2385617 REVERSE LENGTH=272 50 1e-06
>AT1G02816.1 | chr1:621637-622137 FORWARD LENGTH=167
Length = 166
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 55 DEEPSAYEMLERFGFPRGILPEGVTGYTLRPSDGEFAVYLGTGECEFEVDGGYRLTYQGR 114
D+ P+AY +L+ + FP GILP+GV Y L S G+F Y C F + G Y+L Y+
Sbjct: 27 DDIPTAYTLLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKS-CSFALQGSYQLDYKST 85
Query: 115 ITGRVAGGSITGLRGVTVRVFMMNWGIDRVVVADADHLVFYVGPLSQAFPVDGFEESPQC 174
I+G ++ IT L GV V+V + W V+ + D L F VG S F +D F ESPQC
Sbjct: 86 ISGYISENKITKLTGVKVKVLFL-WLNIVEVIRNGDELEFSVGITSANFEIDEFYESPQC 144
Query: 175 RC 176
C
Sbjct: 145 GC 146
>AT4G02360.1 | chr4:1041179-1041643 FORWARD LENGTH=155
Length = 154
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Query: 56 EEPSAYEMLERFGFPRGILPEGVTGYTLRPSDGEFAVYLGTGECEFEVDGGYRLTYQGRI 115
++P+AY+ ++ + P GILP+GV Y L P G F VY CEF + Y+L Y+ I
Sbjct: 25 QKPTAYDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFN-DTCEFTIQ-SYQLKYKSTI 82
Query: 116 TGRVAGGSITGLRGVTVRVFMMNWGIDRVVVADADHLVFYVGPLSQAFPVDGFEESPQCR 175
+G ++ G + L+GV+V+V I V + AD L F VG S +FP FEESPQC
Sbjct: 83 SGVISPGHVKNLKGVSVKVLFFWVNIAEVSLDGAD-LDFSVGIASASFPAANFEESPQCG 141
Query: 176 C 176
C
Sbjct: 142 C 142
>AT4G02370.1 | chr4:1042458-1042961 FORWARD LENGTH=168
Length = 167
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 50 LTDCGDEEPSAYEMLERFGFPRGILPEGVTGYTLRPSDGEFAVYLGTGECEFEVDGGYRL 109
+T + P+AY +L+ + FP GILP+GV Y L + G+F Y C F + G Y+L
Sbjct: 22 VTAAESDTPTAYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYFN-DSCSFNLVGSYQL 80
Query: 110 TYQGRITGRVAGGSITGLRGVTVRVFMMNWGIDRVVVADADHLVFYVGPLSQAFPVDGFE 169
Y+ I+G ++ + L GV V+V + W V+ + D + F VG S F + F
Sbjct: 81 NYKSTISGYISENKLKKLTGVKVKVLFL-WLNIVEVIRNGDEMEFSVGITSANFAIQEFL 139
Query: 170 ESPQCRC 176
ESPQC C
Sbjct: 140 ESPQCGC 146
>AT1G02813.1 | chr1:620773-621222 FORWARD LENGTH=150
Length = 149
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 54 GDEEPSAYEMLERFGFPRGILPEGVTGYTLRPSDGEFAVYLGTGECEFEVDGGYRLTYQG 113
G ++ S Y++LE + PRGILPEGV Y L G F V T C+F +D Y++ Y+
Sbjct: 19 GQKKRSVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNT-TCQFSID-SYKVKYKP 76
Query: 114 RITGRVAGGSITGLRGVTVRVFMMNWGIDRVVVADADHLVFYVGPLSQAFPVDGFEESPQ 173
I+G + G + L GV+V+V I V D D + F+VG S+ F F +SP+
Sbjct: 77 VISGIITRGRVIRLIGVSVKVLFFWINISE-VSRDGDDVEFFVGAASEEFSSKYFVDSPK 135
Query: 174 CRC 176
C C
Sbjct: 136 CGC 138
>AT5G19590.1 | chr5:6611614-6612069 REVERSE LENGTH=152
Length = 151
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 60 AYEMLERFGFPRGILPEGVTGYTLRPSDGEFAVYLGTGECEFEVD-GGYRLTYQGRITGR 118
A+ L GFP G+LP V Y L + G+F+++L G C+ + Y TY ++TGR
Sbjct: 31 AHAELTNHGFPIGLLPLSVKDYFLNQTSGDFSLFLN-GACKITLPPDNYIATYSNKVTGR 89
Query: 119 VAGGSITGLRGVTVRVFMMNWGIDRVVVADADHLVFYVGPLSQAFPVDGFEESPQC 174
++ G I L+G+ VR F +W I + + D+LVF V ++ +P F+ES C
Sbjct: 90 ISQGKIAELQGIRVRAFFKSWSITG-IRSSGDNLVFEVAGITAKYPSKNFDESLDC 144
>AT5G19860.1 | chr5:6714533-6715837 REVERSE LENGTH=182
Length = 181
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 55 DEEPSAYEMLERFGFPRGILPEGVTGYTLRPSDGEFAVYLGTGECEFEVDGGYRLTYQGR 114
D + YE+L ++G P G+LP+ VT +TL DG F V+L CE E D Y + Y
Sbjct: 31 DSISTVYELLPKYGLPSGLLPDTVTDFTLS-DDGRFVVHL-PNSCEIEFD--YLVHYDKT 86
Query: 115 ITGRVAGGSITGLRGVTVRVFMMNWGIDRVVV--ADADHLVFYVGPLSQAFPVDGFEESP 172
I+GR+ GSIT L+G+ V+ F + +D + V +D + F VG +++ +D F+
Sbjct: 87 ISGRIGYGSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIYFKVGFINKKLDIDQFKTIH 146
Query: 173 QCR 175
C
Sbjct: 147 SCH 149
>AT1G55265.1 | chr1:20617326-20617853 FORWARD LENGTH=176
Length = 175
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 61 YEMLERFGFPRGILPEGVTGYTLRPSDGEFAVYLGTGECEFEVDGGYRLTYQGR-ITGRV 119
+++L R+GFP+G+LP V YT+ DG+F V L C + +L + G+ I G++
Sbjct: 55 HDLLPRYGFPKGLLPNNVKSYTIS-DDGDFTVDL-ISSCYVKFSD--QLVFYGKNIAGKL 110
Query: 120 AGGSITGLRGVTVRVFMMNWGIDRVVVADADH--LVFYVGPLSQAFPVDGFEESPQC 174
+ GS+ +RG+ + + W + +D +VF VG +S+ P FE P C
Sbjct: 111 SYGSVKDVRGIQAKEAFL-WLPITAMESDPSSATVVFSVGFVSKTLPASMFENVPSC 166
>AT3G07470.1 | chr3:2387291-2388343 REVERSE LENGTH=170
Length = 169
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 48 LGLTDCGDEEPSAYEMLERFGFPRGILPEGVTGYTLRPSDGEFAVYLGTG-ECEFEVDGG 106
+ ++ E + YE+L G P GI P+GV +T G F+VYL E ++E +
Sbjct: 19 ISISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETE-- 76
Query: 107 YRLTYQGRITGRVAGGSITGLRGVTVRVFMMNWGID--RVVVADADHLVFYVGPLSQAFP 164
+ Y ITG + I+ L G++ + + + + RV V + + F VG + + +
Sbjct: 77 --IHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYS 134
Query: 165 VDGFEESPQC 174
+ FE C
Sbjct: 135 LSLFETPRDC 144
>AT5G54530.1 | chr5:22152781-22154201 FORWARD LENGTH=162
Length = 161
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 8/121 (6%)
Query: 58 PSAYEMLERFGFPRGILPEGVTGYTLRPSDGEFAVYLGTG-ECEFEVDGGYRLTYQGRIT 116
P+ +++L G P G+LP+ V Y L +DG V+L +FE + + ++ +
Sbjct: 27 PTVHDVLRSEGLPAGLLPQEVDSYILH-NDGRLEVFLAAPCYAKFETN----VHFEAVVR 81
Query: 117 GRVAGGSITGLRGVTVRVFMMNWGIDRVVVADADH--LVFYVGPLSQAFPVDGFEESPQC 174
G ++ GS+ G+ G++ + + + +VV + + +VF +G + + FE+ P+C
Sbjct: 82 GNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKC 141
Query: 175 R 175
+
Sbjct: 142 K 142
>AT3G07460.2 | chr3:2384544-2385617 REVERSE LENGTH=272
Length = 271
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 56 EEPSAYEMLERFGFPRGILPEGVTGYTLRPSDGEFAVYLGTG-ECEFEVDGGYRLTYQGR 114
E S E+L G P G+ P+GV G+T+ G F+VYL + ++E + L Y
Sbjct: 26 ENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETE----LHYDEI 81
Query: 115 ITGRVAGGSITGLRGVTVRVFMMNWGID--RVVVADADHLVFYVGPLSQAFPVDGFEESP 172
++G + I L G++ + + + RV V + + F VG L + + + FE
Sbjct: 82 VSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPR 141
Query: 173 QC 174
C
Sbjct: 142 DC 143
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.144 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,655,947
Number of extensions: 155052
Number of successful extensions: 312
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 303
Number of HSP's successfully gapped: 11
Length of query: 190
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 97
Effective length of database: 8,556,881
Effective search space: 830017457
Effective search space used: 830017457
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)