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Os03g0692700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Pherophorin-S precursor.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0165) R2 : 0.0171
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0975 (0.0347) R2dN8 : 0.022 R2N8 : 0.0171
σ : 0.31
deviance : 44.1
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.63 0.251 12.4 -0.105 0.483 0.539 -0.0387 1.36 0.133 12.4 24.24 7 -- --
30.44 0.259 12.4 0.102 0.535 0.555 -0.429 -- 0.18 12.9 71.58 12 -- --
28.54 0.251 12.4 -0.105 0.484 0.572 -- 1.43 0.131 12.4 23.8 6 -- --
31.18 0.262 12.4 0.0898 0.54 0.58 -- -- 0.18 12.8 51.19 9 -- --
37.99 0.287 12.4 -0.074 -- 0.583 -- 0.939 0.157 -- 31.68 925 -- --
33.44 0.271 12.4 -0.00268 0.391 -- -0.464 -- 0.102 12.4 -- -- -- --
34.36 0.274 12.4 -0.021 0.393 -- -- -- 0.0997 12.2 -- -- -- --
38.78 0.29 12.4 0.124 -- 0.573 -- -- 0.187 -- 48.53 918 -- --
31.37 0.262 12.4 -- 0.528 0.537 -- -- 0.165 12.8 51.19 9 -- --
44.07 0.31 12.4 -0.0339 -- -- -- -- 0.0937 -- -- -- -- --
34.37 0.274 12.4 -- 0.393 -- -- -- 0.102 12.2 -- -- -- --
39.15 0.291 12.4 -- -- 0.524 -- -- 0.166 -- 52.59 904 -- --
44.1 0.31 12.4 -- -- -- -- -- 0.0975 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.28 temperature 25 720 < th dose dependent rect. 15 8
2 28.30 temperature 25 720 < th dose dependent rect. 14 10
6 28.32 temperature 25 720 < th dose dependent rect. 12 13
8 28.33 temperature 10 270 > th dose dependent sin 13 NA
13 28.36 temperature 25 720 < th dose dependent sin 18 NA
17 28.37 temperature 25 270 < th dose dependent rect. 13 18
20 28.37 temperature 15 10 > th dose dependent rect. 7 23
25 28.40 temperature 30 270 < th dose dependent rect. 17 14
26 28.41 temperature 25 4320 < th dose dependent rect. 21 1
47 28.48 temperature 25 270 < th dose dependent sin 13 NA
79 28.54 temperature 25 10 < th dose dependent rect. 15 20
112 28.60 temperature 10 4320 > th dose dependent rect. 21 1
117 28.61 temperature 25 4320 < th dose independent rect. 19 8
122 28.62 temperature 25 4320 < th dose independent rect. 20 6
128 28.62 temperature 25 10 < th dose dependent rect. 12 23
129 28.63 temperature 25 720 < th dose dependent rect. 19 2
156 28.66 temperature 20 4320 > th dose independent rect. 20 4
206 28.72 temperature 20 4320 > th dose independent rect. 21 2
212 28.72 temperature 10 4320 > th dose dependent rect. 20 4
248 28.74 temperature 25 90 < th dose dependent rect. 19 23
273 28.76 temperature 25 10 < th dose dependent rect. 7 23
276 28.76 temperature 25 10 < th dose dependent rect. 21 23
277 28.77 temperature 25 4320 < th dose independent rect. 20 2
279 28.77 temperature 25 10 < th dose dependent no NA NA
280 28.77 temperature 25 90 < th dose dependent no NA NA
289 28.77 temperature 25 10 < th dose dependent rect. 1 23
290 28.77 temperature 25 10 < th dose dependent rect. 17 23
291 28.77 temperature 25 10 < th dose dependent rect. 19 23
302 28.78 temperature 15 90 > th dose dependent rect. 9 20
305 28.78 temperature 25 10 < th dose dependent rect. 3 23
306 28.78 temperature 25 10 < th dose dependent rect. 9 23
324 28.80 temperature 25 10 < th dose dependent rect. 5 23
328 28.80 temperature 25 90 < th dose dependent rect. 17 23
377 28.83 temperature 20 10 > th dose dependent rect. 10 20
383 28.83 temperature 25 10 < th dose dependent rect. 23 23
405 28.85 temperature 10 4320 > th dose dependent rect. 23 1
406 28.85 temperature 20 4320 > th dose dependent rect. 23 1
422 28.85 temperature 15 90 > th dose dependent rect. 9 23
445 28.87 temperature 10 10 > th dose dependent sin 11 NA
488 28.88 temperature 15 10 > th dose dependent rect. 9 23
495 28.89 temperature 10 720 > th dose dependent sin 17 NA
559 28.91 temperature 25 90 < th dose dependent rect. 5 23
597 28.94 temperature 30 10 < th dose dependent sin 11 NA
622 28.94 temperature 15 10 > th dose dependent rect. 21 23
653 28.96 temperature 10 10 > th dose dependent no NA NA
670 28.97 temperature 20 4320 > th dose independent rect. 14 10
685 28.98 temperature 20 4320 > th dose independent rect. 16 8
697 28.98 temperature 10 720 > th dose dependent rect. 11 16
700 28.98 temperature 20 720 > th dose dependent rect. 13 20
707 28.98 temperature 15 90 > th dose dependent rect. 21 23
716 28.99 humidity 80 10 > th dose dependent rect. 24 6
732 29.00 temperature 20 4320 > th dose dependent rect. 1 1
759 29.01 temperature 25 720 > th dose independent rect. 14 19
892 29.06 temperature 20 4320 < th dose independent rect. 13 11
896 29.06 temperature 10 90 > th dose dependent no NA NA
920 29.07 temperature 20 4320 < th dose independent rect. 15 9
996 29.09 temperature 20 1440 > th dose dependent rect. 4 1