BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0622500 Os03g0622500|AK073006
(125 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0622500 Hypothetical protein 264 2e-71
Os02g0231600 Similar to Transposase (Fragment) 131 1e-31
Os12g0299600 Transposase, IS4 domain containing protein 117 2e-27
Os06g0595700 Transposase, IS4 domain containing protein 117 2e-27
Os01g0894100 Similar to Transposase (Fragment) 116 3e-27
Os05g0217900 Conserved hypothetical protein 115 6e-27
Os12g0500800 Similar to Transposase (Fragment) 115 9e-27
Os09g0419300 110 3e-25
Os05g0118301 109 4e-25
Os06g0537900 108 1e-24
Os08g0106900 Transposase, IS4 domain containing protein 107 2e-24
Os04g0401400 Sigma factor, regions 3 and 4 domain containin... 106 3e-24
Os05g0269800 Transposase, IS4 domain containing protein 106 4e-24
Os10g0461700 105 6e-24
Os03g0157450 Similar to Transposase (Fragment) 103 4e-23
Os06g0210700 101 1e-22
Os08g0459400 Transposase, IS4 domain containing protein 100 3e-22
Os11g0252900 Conserved hypothetical protein 98 1e-21
Os05g0208600 96 6e-21
Os05g0348300 92 1e-19
Os12g0463900 91 1e-19
Os05g0596300 91 2e-19
Os12g0598800 91 3e-19
Os06g0588700 91 3e-19
Os07g0652800 Conserved hypothetical protein 89 1e-18
Os08g0496700 88 1e-18
Os07g0682200 86 7e-18
Os04g0562300 86 8e-18
Os01g0693600 Conserved hypothetical protein 85 1e-17
Os11g0599400 Hypothetical protein 69 1e-12
Os03g0608700 Similar to Transposase (Fragment) 66 7e-12
Os04g0125900 65 1e-11
>Os03g0622500 Hypothetical protein
Length = 125
Score = 264 bits (674), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 LVLYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAP 60
LVLYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAP
Sbjct: 1 LVLYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAP 60
Query: 61 SLHPHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDL 120
SLHPHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDL
Sbjct: 61 SLHPHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDL 120
Query: 121 KFVHI 125
KFVHI
Sbjct: 121 KFVHI 125
>Os02g0231600 Similar to Transposase (Fragment)
Length = 398
Score = 131 bits (329), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Query: 5 VSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPSLHP 64
VSVEE I +F+Y +++NA+ + + D F+HS +TIHR+ KA +AIT+LT +++ PS
Sbjct: 88 VSVEEQIGMFIYMLSRNASFQKMSDRFEHSRETIHRHIKACFDAITSLTDEFVKHPSTET 147
Query: 65 H-PILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLKFV 123
H I PQ+ P+F+NCIGAIDG H+P+ + E YRN + ++SQN M+ACDFDL FV
Sbjct: 148 HWKISSDPQYGPYFKNCIGAIDGVHVPITISDYEAAPYRNIEDSLSQNVMLACDFDLNFV 207
Query: 124 HI 125
H+
Sbjct: 208 HV 209
>Os12g0299600 Transposase, IS4 domain containing protein
Length = 754
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 85/123 (69%), Gaps = 2/123 (1%)
Query: 5 VSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAP-SLH 63
+ +EE + IF++ +A NA+ + LQ F+HS T+HR+ K++ + I LT +++ P +
Sbjct: 89 LRIEEKLGIFMFMLAHNASFQDLQYEFKHSGSTLHRHIKSIFKIIPALTYRFLKLPHANQ 148
Query: 64 PHPILR-KPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLKF 122
H +R P+F+P+F+NCIGAIDGTHIP+ + ++ YRNRK T+SQN MVACDFDL F
Sbjct: 149 THWKIRTNPRFFPYFKNCIGAIDGTHIPITIDGEKAAPYRNRKGTLSQNVMVACDFDLNF 208
Query: 123 VHI 125
I
Sbjct: 209 TFI 211
>Os06g0595700 Transposase, IS4 domain containing protein
Length = 817
Score = 117 bits (293), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 82/122 (67%), Gaps = 3/122 (2%)
Query: 5 VSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAV-QEAITNLTSVYIRAPSLH 63
+ VEE +A FLY ++ NA+ E LQ+ F HS D+ HR+ K + +L+ +++ P+ +
Sbjct: 177 IKVEEKLAFFLYMLSHNASFEDLQEKFGHSGDSFHRHVKHFFNSVVPSLSKRFLKPPNPN 236
Query: 64 P--HPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLK 121
I + P+FYP+F+NC+GAIDGTHIP+ + D+ +RNRK T+SQN M+ACDFDLK
Sbjct: 237 EVHWKIEKDPRFYPYFKNCLGAIDGTHIPISISSDKAAPFRNRKNTLSQNVMIACDFDLK 296
Query: 122 FV 123
Sbjct: 297 IT 298
>Os01g0894100 Similar to Transposase (Fragment)
Length = 251
Score = 116 bits (291), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 85/123 (69%), Gaps = 2/123 (1%)
Query: 5 VSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAP-SLH 63
+ +EE + IF++ +A NA+ + LQ F+HS T+HR+ K++ + I LT +++ P +
Sbjct: 89 LRIEEKLGIFMFMLAHNASFQDLQYEFKHSGSTLHRHIKSIFKIIPALTYRFLKLPHADQ 148
Query: 64 PHPILR-KPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLKF 122
H +R P+F+P+F+NCIGAIDGTHIP+ + ++ YRNRK T+SQN +VACDFDL F
Sbjct: 149 THWKIRTNPRFFPYFKNCIGAIDGTHIPITIDGEKAAPYRNRKGTLSQNVIVACDFDLNF 208
Query: 123 VHI 125
I
Sbjct: 209 TFI 211
>Os05g0217900 Conserved hypothetical protein
Length = 558
Score = 115 bits (289), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 85/123 (69%), Gaps = 2/123 (1%)
Query: 5 VSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAP-SLH 63
+ +EE + IF++ +A NA+ + LQ F+HS T+HR+ K++ + I LT +++ P +
Sbjct: 89 LRIEEKLGIFMFMLAHNASFQDLQYEFKHSGSTLHRHIKSIFKIIPALTYRFLKLPHADQ 148
Query: 64 PHPILR-KPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLKF 122
H +R P+F+P+F+NCIGAIDGTHIP+ + ++ YRNRK T+SQN +VACDFDL F
Sbjct: 149 THWKIRTNPRFFPYFKNCIGAIDGTHIPITIDGEKAAPYRNRKGTLSQNVIVACDFDLNF 208
Query: 123 VHI 125
I
Sbjct: 209 TFI 211
>Os12g0500800 Similar to Transposase (Fragment)
Length = 222
Score = 115 bits (287), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Query: 5 VSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPSLHP 64
V VEE +A+F+Y ++ NA+ + +Q F+HS TIH + +A + + LT +I+ P +
Sbjct: 33 VRVEEKLAMFMYMLSHNASYQDMQYEFKHSGATIHLHIRAFFDIVPTLTHRFIKPPLANQ 92
Query: 65 --HPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLKF 122
I P+FYP+F+NC+GAIDGTH+P+ + + YRNRK T+SQN M+ACDFDL F
Sbjct: 93 THSKITSNPRFYPYFKNCLGAIDGTHVPITINPEMAAPYRNRKSTLSQNVMLACDFDLNF 152
Query: 123 VHI 125
I
Sbjct: 153 TFI 155
>Os09g0419300
Length = 627
Score = 110 bits (274), Expect = 3e-25, Method: Composition-based stats.
Identities = 52/124 (41%), Positives = 77/124 (62%), Gaps = 1/124 (0%)
Query: 3 LYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPSL 62
+++ VEE +A+FL+T+ N N + F S +T+ RYF V A+ L IR PS+
Sbjct: 76 IHMPVEEQVAMFLHTIGHNDRNRVVATNFYRSSETVSRYFNLVLHAVGELRKELIRPPSI 135
Query: 63 H-PHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLK 121
P IL P++ P+F++CIGAIDGTH+ + + D + S+R RK +QN M A DFDLK
Sbjct: 136 TTPSKILGNPRWDPYFKDCIGAIDGTHVRVSVTKDMEPSFRGRKDHATQNVMAAIDFDLK 195
Query: 122 FVHI 125
F ++
Sbjct: 196 FTYV 199
>Os05g0118301
Length = 369
Score = 109 bits (273), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 82/126 (65%), Gaps = 2/126 (1%)
Query: 2 VLYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTS--VYIRA 59
L+V+VEE IA+F++ V N ++ F S +T+ RYF AV +++ +++ +YIR+
Sbjct: 63 TLHVTVEEQIAMFMHIVGHKWCNRSVGFEFFRSGETVSRYFNAVLDSLVSISKELIYIRS 122
Query: 60 PSLHPHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFD 119
HP +F+P+F+ CIGA+DGTH+P +P Q+ +R RK++ +QN + A DFD
Sbjct: 123 TETHPKITSSPGRFHPYFEGCIGALDGTHVPASVPAHMQDRFRGRKKSPTQNVLAAVDFD 182
Query: 120 LKFVHI 125
L+F+++
Sbjct: 183 LRFIYV 188
>Os06g0537900
Length = 310
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 80/126 (63%), Gaps = 2/126 (1%)
Query: 2 VLYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTS--VYIRA 59
L+V++EE IA+F++ V +N ++ F S +T+ RYF AV +++ +++ +YIR+
Sbjct: 50 TLHVTIEEQIAMFMHIVGHKWSNRSVGFEFYRSGETVSRYFNAVLDSLVSISKELIYIRS 109
Query: 60 PSLHPHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFD 119
HP +F+P+F+ CIGA+DGTH+P +P Q+ +R RK +QN + A DFD
Sbjct: 110 TETHPKITSSPGRFHPYFEGCIGALDGTHVPATVPAHMQDRFRGRKTIPTQNVLAAVDFD 169
Query: 120 LKFVHI 125
L+F +I
Sbjct: 170 LRFTYI 175
>Os08g0106900 Transposase, IS4 domain containing protein
Length = 629
Score = 107 bits (268), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/124 (42%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Query: 3 LYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPSL 62
+++ VEE +A+FL TV N N ++ F S +T+ RYF V AI L IR PSL
Sbjct: 74 IHMRVEEQVAMFLNTVGHNLRNRLVRTNFDRSGETVSRYFNKVLHAIGELRDELIRPPSL 133
Query: 63 H-PHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLK 121
P+ I P++ P+F++CIGAIDGTHI + + + S+R RK +QN M A DFDL+
Sbjct: 134 DTPNKIAGNPRWDPYFKDCIGAIDGTHIRASVRKNMESSFRGRKSHATQNVMAAVDFDLR 193
Query: 122 FVHI 125
F ++
Sbjct: 194 FTYV 197
>Os04g0401400 Sigma factor, regions 3 and 4 domain containing protein
Length = 261
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 2 VLYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPS 61
+++ +EE +A+FL+TV N N ++ + S +T+ RYF V AI L IR PS
Sbjct: 50 TIHMCIEEQVAMFLHTVGHNLRNRLVRTNYDRSGETVSRYFNKVLHAIGELRDELIRPPS 109
Query: 62 LH-PHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDL 120
L P I P++ P+F++CIGAIDGTHI + + + S+R RK +QN M A DFDL
Sbjct: 110 LDTPTKIAGNPRWDPYFKDCIGAIDGTHIRASIRKNVESSFRGRKSHATQNVMAAVDFDL 169
Query: 121 KFVHI 125
+F ++
Sbjct: 170 RFTYV 174
>Os05g0269800 Transposase, IS4 domain containing protein
Length = 529
Score = 106 bits (265), Expect = 4e-24, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Query: 3 LYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPSL 62
+++ +EE +A+FL+TV N N ++ + S +T+ RYF V AI L IR PSL
Sbjct: 19 IHMCIEEQVAMFLHTVGHNLRNRLVRTNYSRSGETVSRYFNKVLHAIGELRDELIRPPSL 78
Query: 63 H-PHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLK 121
P I P++ P+F++CIGAIDGTHI + + + S+R RK +QN M A DFDL+
Sbjct: 79 DTPTKIAGNPRWDPYFKDCIGAIDGTHIRASVRKNVESSFRGRKSHATQNVMAAVDFDLR 138
Query: 122 FVHI 125
F ++
Sbjct: 139 FTYV 142
>Os10g0461700
Length = 290
Score = 105 bits (263), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 2 VLYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPS 61
+++ +EE +A+FL+TV N N ++ + S +T+ RYF V AI L IR PS
Sbjct: 18 TIHMCIEEQVAMFLHTVGHNLRNRLVRTNYDRSGETVSRYFNKVLHAIGELRDELIRPPS 77
Query: 62 LH-PHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDL 120
L P I P++ P+F++CIGAIDGTHI + + + S+R +K +QN M A DFDL
Sbjct: 78 LDTPTKIAGNPRWDPYFKDCIGAIDGTHIRASVRKNMESSFRGKKSHATQNVMAAVDFDL 137
Query: 121 KFVHI 125
+F ++
Sbjct: 138 RFTYV 142
>Os03g0157450 Similar to Transposase (Fragment)
Length = 611
Score = 103 bits (256), Expect = 4e-23, Method: Composition-based stats.
Identities = 48/125 (38%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Query: 3 LYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTS--VYIRAP 60
+VSVEE +A+FL V ++ + + F S +T+ RYF+ V A+ + +YIR+
Sbjct: 98 FHVSVEEQVAMFLKKVGQHHSVSCVGFSFWRSGETVSRYFRIVLRAMCEIARELIYIRST 157
Query: 61 SLHPHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDL 120
+ H +K +FYP+F++CIGA+DGTHI +P + + +R RK +QN + A DFDL
Sbjct: 158 NTHSKITSKKNKFYPYFKDCIGALDGTHIRASVPAKKVDRFRGRKPYPTQNVLAAVDFDL 217
Query: 121 KFVHI 125
+F++I
Sbjct: 218 RFIYI 222
>Os06g0210700
Length = 680
Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 78/126 (61%), Gaps = 2/126 (1%)
Query: 2 VLYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTS--VYIRA 59
+VSVEE +A+FL V ++ + + F S +T+ RYF+ V A+ + +YIR+
Sbjct: 97 TFHVSVEEQVAMFLKKVGQHHSVSCVGFSFWRSGETVSRYFRIVLRAMCEIARELIYIRS 156
Query: 60 PSLHPHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFD 119
+ H +K +FYP+F++CIGA+DGTHI +P + + +R RK +QN + A DFD
Sbjct: 157 TNTHSKITSKKNKFYPYFKDCIGALDGTHIRASVPAKKVDRFRGRKPYPTQNVLAAVDFD 216
Query: 120 LKFVHI 125
L+F++I
Sbjct: 217 LRFIYI 222
>Os08g0459400 Transposase, IS4 domain containing protein
Length = 705
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 78/126 (61%), Gaps = 2/126 (1%)
Query: 2 VLYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPS 61
++VSVEE +A+FL+TV N N + + S +T+ RYF V +A+ L I+ S
Sbjct: 127 TIHVSVEEQLAMFLHTVGHNLRNRVIGFYVIRSSETVSRYFNEVLKALCCLAKDMIQIRS 186
Query: 62 LHPHP-ILRKP-QFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFD 119
+ H I+ P +FYP+F++CIGA+DGTHIP +P + +R RK +QN + A DFD
Sbjct: 187 IETHSKIVSNPGRFYPYFEDCIGALDGTHIPAFVPENIVNRFRGRKSYPTQNVLAAVDFD 246
Query: 120 LKFVHI 125
L+F ++
Sbjct: 247 LRFTYV 252
>Os11g0252900 Conserved hypothetical protein
Length = 170
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Query: 3 LYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPSL 62
+++ +EE +A FL+TV N N + + S +T+ RYF V AI L IR PSL
Sbjct: 19 IHMCIEEQVATFLHTVGYNLRNRLVHTNYDRSGETVSRYFNKVLNAIGELRDELIRPPSL 78
Query: 63 H-PHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLK 121
P I P++ P+F++CI AIDGTHI + + + S+R RK +Q MVA DFDL+
Sbjct: 79 DTPTKIAGNPRWDPYFKDCIEAIDGTHIRASVRKNVESSFRGRKSHATQILMVAVDFDLR 138
Query: 122 FVHI 125
F +
Sbjct: 139 FTFV 142
>Os05g0208600
Length = 736
Score = 95.9 bits (237), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Query: 2 VLYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTS--VYIRA 59
+VSVEE +A+FL V ++ + ++ F S +T+ RYF V A+ L +Y+R+
Sbjct: 124 TFHVSVEEQVAMFLKKVGQHHSVPSVGFSFWRSGETVSRYFHIVLRAMCELARELIYVRS 183
Query: 60 PSLHPHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFD 119
H +FYP+F+ CIGA+DGTHI +P + + +R RK +QN + A DFD
Sbjct: 184 ADTHTKITSNPNKFYPYFEGCIGALDGTHIRASVPAKKVDRFRGRKSYPTQNVLAAVDFD 243
Query: 120 LKFVHI 125
L+F +I
Sbjct: 244 LRFTYI 249
>Os05g0348300
Length = 1220
Score = 91.7 bits (226), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 18 VAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPSLH-PHPILRKPQFYPF 76
V N N ++ F S +T+ RYF V AI L IR PSL P I P++ P+
Sbjct: 171 VGHNLRNRLVRTNFDRSGETVSRYFNKVLHAIGELRDELIRPPSLDTPTKIAGNPRWDPY 230
Query: 77 FQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLKFVHI 125
F++CIGAIDGTHI + + + S+R RK +QN M A DFDL+F ++
Sbjct: 231 FKDCIGAIDGTHIRASVRKNVESSFRGRKSHATQNVMAAVDFDLRFTYV 279
>Os12g0463900
Length = 581
Score = 91.3 bits (225), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 18 VAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPSLH-PHPILRKPQFYPF 76
V N N ++ F S +T+ RYF V AI L IR PSL P I P++ P+
Sbjct: 18 VGHNLRNRLVRTNFDRSGETVSRYFNKVLHAIGELRDELIRPPSLDTPTKIAGNPRWDPY 77
Query: 77 FQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLKFVHI 125
F++CIGAIDGTHI + + + S+R RK +QN M A DFDL+F ++
Sbjct: 78 FKDCIGAIDGTHIRASVRKNVESSFRGRKSHATQNVMAAVDFDLRFTYV 126
>Os05g0596300
Length = 631
Score = 91.3 bits (225), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Query: 3 LYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAP-- 60
L++S E +A+FL+T N +N Q+ F+HS +TI R F V ++ + YIR
Sbjct: 434 LHMSTHEMLAMFLFTCGGNESNRRAQNRFKHSGETISRKFDEVLNSLMAMAKDYIRPKDP 493
Query: 61 ---SLHPHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACD 117
S+H I + +P F+ CIGA+DGTHI + L DEQ Y + +QN + CD
Sbjct: 494 NFRSVHKR-IRDDRRAFPHFKGCIGALDGTHIRVSLSPDEQVRYIGKTGIPTQNVLAVCD 552
Query: 118 FDLKFVHI 125
FD++F ++
Sbjct: 553 FDMRFTYV 560
>Os12g0598800
Length = 524
Score = 90.5 bits (223), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 18 VAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPSLH-PHPILRKPQFYPF 76
V N N ++ F S +T+ RYF V AI L IR PSL P I P++ P+
Sbjct: 18 VGHNLRNRLVRTNFDRSGETVSRYFNKVLHAIGELRDELIRPPSLDTPTKIAGNPRWDPY 77
Query: 77 FQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLKFVHI 125
F++CIGAIDGTHI + + + S+R RK +QN M A DFDL+F ++
Sbjct: 78 FKDCIGAIDGTHIRASVRKNVESSFRGRKSHATQNVMAAVDFDLRFTYV 126
>Os06g0588700
Length = 754
Score = 90.5 bits (223), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 6/128 (4%)
Query: 3 LYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAP-- 60
L++S E +A+FL+T N +N Q+ F+HS +TI R F V ++ + YIR
Sbjct: 440 LHMSTHEMLAMFLFTCGGNESNRRAQNRFKHSGETISRKFDEVLNSLMAMAKDYIRPKDP 499
Query: 61 ---SLHPHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACD 117
S+H I + +P F++CIGA+DGTHI + L DEQ Y + +QN + CD
Sbjct: 500 NFRSVHKR-IRDDRRTFPHFKDCIGALDGTHIRVSLSPDEQVRYIGKTGIPTQNVLAVCD 558
Query: 118 FDLKFVHI 125
FD++F ++
Sbjct: 559 FDMRFTYV 566
>Os07g0652800 Conserved hypothetical protein
Length = 483
Score = 88.6 bits (218), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 34 SPDTIHRYFKAVQEAITNLTSVYIRAPSLH-PHPILRKPQFYPFFQNCIGAIDGTHIPMK 92
S +T+ RYF V A+ L IR PS+ P IL P++ P+F++CIGAIDGTH+ +
Sbjct: 26 SGETVSRYFNLVLHAVGELRKELIRPPSITTPSKILGNPRWDPYFKDCIGAIDGTHVRVS 85
Query: 93 LPLDEQESYRNRKQTISQNCMVACDFDLKFVHI 125
+ D + S+R RK +QN M A DFDLKF ++
Sbjct: 86 VTKDMEPSFRGRKDHATQNVMEAIDFDLKFTYV 118
>Os08g0496700
Length = 815
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Query: 4 YVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPSLH 63
+ +VEE IA+FL TV + N + F S +T+ YF V AI +L + +R +
Sbjct: 367 HCTVEEQIAMFLTTVGHHKKNGDIGFHFTRSGETVSWYFNKVLYAIGHLGTEMLRHRTHD 426
Query: 64 -PHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLKF 122
P IL +F P+F++CIGAIDGTH+P +P + +R RK +QN + DFDL F
Sbjct: 427 TPSKILGNQRFDPYFKDCIGAIDGTHVPCNVPSRISDRFRGRKPFPTQNVLAVVDFDLMF 486
Query: 123 VHI 125
+I
Sbjct: 487 TYI 489
>Os07g0682200
Length = 354
Score = 85.9 bits (211), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 2 VLYVSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRAPS 61
+++S+EE +A+F+ TV N N ++ F S +T+ RYF V A+ L IR PS
Sbjct: 73 TIHMSIEEQVAMFINTVGHNLRNRLVRTNFDRSGETVSRYFNKVFHAVGELRDELIRPPS 132
Query: 62 LH-PHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACD 117
L P I P++ P+F++CIGAIDG HI + + + +R RK +QN A D
Sbjct: 133 LDTPSKITGNPRWDPYFKDCIGAIDGAHIRASVEKNMEPYFRGRKSHATQNEGTAHD 189
>Os04g0562300
Length = 426
Score = 85.5 bits (210), Expect = 8e-18, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 34 SPDTIHRYFKAVQEAITNLTSVYIRAPSLH-PHPILRKPQFYPFFQNCIGAIDGTHIPMK 92
S +T+ RYF V AI L IR PSL P I P++ P+F++CIGAIDGTHI
Sbjct: 11 SRETVSRYFNKVLHAIGELRDELIRPPSLDTPTKIAGNPRWDPYFKDCIGAIDGTHIRAS 70
Query: 93 LPLDEQESYRNRKQTISQNCMVACDFDLKFVHI 125
+ + + S+R RK +QN M A DFDL+F ++
Sbjct: 71 VRKNVESSFRGRKSHATQNVMAAVDFDLRFTYV 103
>Os01g0693600 Conserved hypothetical protein
Length = 807
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 5 VSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYIRA--PSL 62
+S E +AIFL+ V + D S +TI R F V + L IR P
Sbjct: 612 MSSVEALAIFLWIVGAPQSIRQADDRLVRSLETISRTFNKVLRCLLRLAPNIIRPRDPEF 671
Query: 63 HP-HPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLK 121
HP L P F+P+F +CIGAIDGTH+ + +P ++ Y NR SQN + CDFD++
Sbjct: 672 SELHPNLENPDFWPYFNDCIGAIDGTHVKLVVPKTKRIQYLNRYNETSQNVLAVCDFDMR 731
Query: 122 FVHI 125
F +
Sbjct: 732 FTFV 735
>Os11g0599400 Hypothetical protein
Length = 270
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 5 VSVEEHIAIFLYTVAKNATNETLQDWFQHSPDTIHRYFKAVQEAITNLTSVYI--RAPSL 62
VS E +A+FL+ V + ++ F S T+H F V + + L I R P+
Sbjct: 96 VSSIESLAMFLWIVGGPQSFSQVESHFTRSLWTVHTKFHEVLKCLRKLAKDNITPRDPTF 155
Query: 63 H-PHPILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLK 121
H LR+ +F+P+F++ IGAIDG+HI + + LDE S+ SQN + +FD++
Sbjct: 156 SMEHGRLREDRFWPYFKDAIGAIDGSHISVVVLLDETISHTCHHGYTSQNVLAIYNFDMR 215
Query: 122 FV 123
F+
Sbjct: 216 FI 217
>Os03g0608700 Similar to Transposase (Fragment)
Length = 249
Score = 65.9 bits (159), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 57 IRAPSLHPHP-ILRKPQFYPFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVA 115
I+ PSL P I ++ P+ ++CIGAIDGTH+ +P + + S+R RK +QN M A
Sbjct: 4 IKPPSLDIAPKIAGNHRWDPYIKDCIGAIDGTHVRASVPKNMESSFRGRKNHATQNVMAA 63
Query: 116 CDFDLKFVHI 125
DFDL+F ++
Sbjct: 64 VDFDLRFTYV 73
>Os04g0125900
Length = 205
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 75 PFFQNCIGAIDGTHIPMKLPLDEQESYRNRKQTISQNCMVACDFDLKFVHI 125
P+F++CIGAIDGTH+ + + D + S+R RK +QN M A DFDLKF ++
Sbjct: 4 PYFKDCIGAIDGTHVRVSVTKDMELSFRGRKDHATQNVMAAIDFDLKFTYV 54
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.138 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,141,811
Number of extensions: 165646
Number of successful extensions: 515
Number of sequences better than 1.0e-10: 32
Number of HSP's gapped: 492
Number of HSP's successfully gapped: 32
Length of query: 125
Length of database: 17,035,801
Length adjustment: 88
Effective length of query: 37
Effective length of database: 12,440,969
Effective search space: 460315853
Effective search space used: 460315853
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 149 (62.0 bits)