BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0166200 Os03g0166200|J075022A11
(135 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0166200 Similar to Prolyl 4-hydroxylase alpha-1 subuni... 281 1e-76
Os10g0413500 Prolyl 4-hydroxylase, alpha subunit domain con... 189 5e-49
Os10g0415128 Prolyl 4-hydroxylase, alpha subunit domain con... 188 9e-49
Os03g0803500 Similar to Prolyl 4-hydroxylase alpha-1 subuni... 167 2e-42
Os07g0194500 Prolyl 4-hydroxylase, alpha subunit domain con... 149 5e-37
Os05g0489100 Similar to Prolyl 4-hydroxylase alpha subunit-... 140 3e-34
Os03g0166100 114 1e-26
Os01g0174500 Prolyl 4-hydroxylase, alpha subunit domain con... 111 2e-25
Os10g0497800 Similar to Prolyl 4-hydroxylase, alpha subunit... 77 3e-15
Os03g0761900 Similar to Prolyl 4-hydroxylase 75 1e-14
Os02g0827100 Hypothetical protein 64 3e-11
Os04g0346000 Prolyl 4-hydroxylase, alpha subunit domain con... 64 3e-11
>Os03g0166200 Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein
Length = 135
Score = 281 bits (719), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 1 FCCKISLQFIFSPQARLSQPKDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLH 60
FCCKISLQFIFSPQARLSQPKDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLH
Sbjct: 1 FCCKISLQFIFSPQARLSQPKDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLH 60
Query: 61 GSCPVIQGEKWSATKWIHVRSYDENGRRSSDKCEDQHALCSSWAAAGECAKNPGYMVGTS 120
GSCPVIQGEKWSATKWIHVRSYDENGRRSSDKCEDQHALCSSWAAAGECAKNPGYMVGTS
Sbjct: 61 GSCPVIQGEKWSATKWIHVRSYDENGRRSSDKCEDQHALCSSWAAAGECAKNPGYMVGTS 120
Query: 121 ESPGFCRKSCNVCTS 135
ESPGFCRKSCNVCTS
Sbjct: 121 ESPGFCRKSCNVCTS 135
>Os10g0413500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 308
Score = 189 bits (480), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 104/122 (85%), Gaps = 2/122 (1%)
Query: 14 QARLSQPKDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSA 73
+ +L QPKD+TWSDCA+ G+AVKP KG A+LFFSL+P+AT D SLHGSCPVI+G+KWSA
Sbjct: 185 EGKLLQPKDDTWSDCAKNGYAVKPVKGDALLFFSLHPDATTDSDSLHGSCPVIEGQKWSA 244
Query: 74 TKWIHVRSYDENGRR--SSDKCEDQHALCSSWAAAGECAKNPGYMVGTSESPGFCRKSCN 131
TKWIHVRS+D + ++ S+D CED++ LC WAA GECAKNP YMVGT+E+PGFCRKSCN
Sbjct: 245 TKWIHVRSFDISVKQGASTDGCEDENVLCPQWAAVGECAKNPNYMVGTNEAPGFCRKSCN 304
Query: 132 VC 133
VC
Sbjct: 305 VC 306
>Os10g0415128 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 241
Score = 188 bits (478), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 104/122 (85%), Gaps = 2/122 (1%)
Query: 14 QARLSQPKDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSA 73
+ +L QPKD+TWSDCA+ G+AVKP KG A+LFFSL+P+AT D SLHGSCPVI+G+KWSA
Sbjct: 105 EGKLLQPKDDTWSDCAKNGYAVKPVKGDALLFFSLHPDATTDSDSLHGSCPVIEGQKWSA 164
Query: 74 TKWIHVRSYDENGRR--SSDKCEDQHALCSSWAAAGECAKNPGYMVGTSESPGFCRKSCN 131
TKWIHVRS+D + ++ S+D CED++ LC WAA GECAKNP YMVGT+E+PGFCRKSCN
Sbjct: 165 TKWIHVRSFDISVKQGASTDGCEDENVLCPQWAAVGECAKNPNYMVGTNEAPGFCRKSCN 224
Query: 132 VC 133
VC
Sbjct: 225 VC 226
>Os03g0803500 Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein
Length = 299
Score = 167 bits (423), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/122 (66%), Positives = 91/122 (74%), Gaps = 1/122 (0%)
Query: 15 ARLSQPKDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSAT 74
R Q KDETWSDCA G AVKP KG A+LFFSL+ NAT DP SLHGSCPVI+GEKWSAT
Sbjct: 178 GRHLQLKDETWSDCARSGLAVKPKKGDALLFFSLHVNATTDPASLHGSCPVIEGEKWSAT 237
Query: 75 KWIHVRSYDENGRRSSD-KCEDQHALCSSWAAAGECAKNPGYMVGTSESPGFCRKSCNVC 133
KWIHVRS+D S D C D++ C+ WAA GEC +NP YMVGT +S GFCRKSC VC
Sbjct: 238 KWIHVRSFDNPPDVSLDLPCSDENERCTRWAAVGECYRNPKYMVGTKDSLGFCRKSCGVC 297
Query: 134 TS 135
+
Sbjct: 298 DA 299
>Os07g0194500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 319
Score = 149 bits (377), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 86/119 (72%), Gaps = 1/119 (0%)
Query: 18 SQPKDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSATKWI 77
+QPKD+T+S+CA++G AVKP KG VLFFSL+ + DP SLHGSCPVI+GEKWSA KWI
Sbjct: 201 NQPKDDTFSECAQKGLAVKPVKGDTVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWI 260
Query: 78 HVRSYDENG-RRSSDKCEDQHALCSSWAAAGECAKNPGYMVGTSESPGFCRKSCNVCTS 135
+RSY+ + ++ C D A C+ WA AGEC KNP YMVG PG CRKSC VC S
Sbjct: 261 RIRSYEHPPVSKVTEGCSDNSARCAKWAEAGECEKNPVYMVGAEGLPGNCRKSCGVCDS 319
>Os05g0489100 Similar to Prolyl 4-hydroxylase alpha subunit-like protein
Length = 319
Score = 140 bits (353), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 21 KDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSATKWIHVR 80
+D T S+CA++G AVKP KG A+LFF+L P+A+ D SLH CPVI+GEKWSATKWI V
Sbjct: 208 EDSTLSECAKKGVAVKPRKGDALLFFNLSPDASKDSLSLHAGCPVIKGEKWSATKWIRVA 267
Query: 81 SYDENGRRSSDKCEDQHALCSSWAAAGECAKNPGYMVGTSESPGFCRKSCNVC 133
S+D+ + C D + C WAA GEC KNP YM+GT+ PG+CRKSCN+C
Sbjct: 268 SFDK-VYHTQGNCTDDNESCEKWAALGECIKNPEYMIGTAALPGYCRKSCNIC 319
>Os03g0166100
Length = 277
Score = 114 bits (286), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/58 (89%), Positives = 54/58 (93%)
Query: 13 PQARLSQPKDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEK 70
PQARLSQPKDETWSDCAEQGFAVKP KGSAVLFFSL+PNAT D SLHGSCPVI+GEK
Sbjct: 196 PQARLSQPKDETWSDCAEQGFAVKPAKGSAVLFFSLHPNATLDTDSLHGSCPVIEGEK 253
>Os01g0174500 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 303
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 14 QARLSQPKDETWSDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSA 73
+ + +Q K+ S C+ G+AV+P KG+A+L F+L P+ D S + CPV++GEKW A
Sbjct: 184 EMKDAQAKEGAPSQCS--GYAVRPAKGNAILLFNLRPDGETDKDSQYEECPVLEGEKWLA 241
Query: 74 TKWIHVRSYD--ENGRRSSDKCEDQHALCSSWAAAGECAKNPGYMVGTSESPGFCRKSCN 131
K I++R +D ++ S D+C D+ C SWAA+GEC +NP +M+G+S+ G CRKSC
Sbjct: 242 IKHINLRKFDYPKSSLASEDECTDEDDRCVSWAASGECDRNPVFMIGSSDYYGSCRKSCR 301
Query: 132 VC 133
VC
Sbjct: 302 VC 303
>Os10g0497800 Similar to Prolyl 4-hydroxylase, alpha subunit-like protein
Length = 321
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 26 SDCAEQGFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSATKWIHVRSY 82
S+CA++G AVKP G A+LF+S+ P+ + D SLHG CPVI+G KWS+TKW+ V Y
Sbjct: 263 SECAKKGLAVKPKMGDALLFWSMRPDGSLDATSLHGGCPVIKGNKWSSTKWMRVHEY 319
>Os03g0761900 Similar to Prolyl 4-hydroxylase
Length = 310
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 32 GFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSATKWIHVRS 81
G VKP KG +LF+SL N T DP SLHGSCPVI+GEKW ATKWI +S
Sbjct: 258 GLKVKPRKGDGLLFYSLMVNGTIDPTSLHGSCPVIKGEKWVATKWIRDKS 307
>Os02g0827100 Hypothetical protein
Length = 40
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 45 FFSLYPNATFDPGSLHGSCPVIQGEKWSATKWIHVRSY 82
F+S+ P+AT DP SLHG CPVI+G KWS+TKW+HVR Y
Sbjct: 1 FWSMKPDATLDPLSLHGGCPVIKGNKWSSTKWMHVREY 38
>Os04g0346000 Prolyl 4-hydroxylase, alpha subunit domain containing protein
Length = 267
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 31 QGFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPVIQGEKWSATKWIHVRSY 82
+G VKP KG AVLF+S+ + D S+HG CPV++GEKWSATKW+ + +
Sbjct: 215 KGLCVKPNKGDAVLFWSMGLDGETDSNSIHGGCPVLEGEKWSATKWMRQKEF 266
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.131 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,739,941
Number of extensions: 237641
Number of successful extensions: 446
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 441
Number of HSP's successfully gapped: 12
Length of query: 135
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 45
Effective length of database: 12,336,541
Effective search space: 555144345
Effective search space used: 555144345
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 150 (62.4 bits)