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Os02g0827100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0188) R2 : 0.66
β1 : -1.46 (0.069) R2dD : 0.349 R2D : 0.284
β2 : 1.04 (0.0492) R2dC : 0.334 R2C : 0.302
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.304 (0.0402) R2dN8 : 0.057 R2N8 : -0.0104
σ : 0.354
deviance : 57.2
__
_____
C
peak time of C : 5.72
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.12 0.323 10.9 -1.45 0.611 2.05 4.65 4.44 -0.287 17.3 0.8494 722 -- --
48.93 0.326 10.8 -1.37 0.0205 1.32 1.29 -- -0.252 15.6 1.081 722 -- --
52.08 0.336 10.8 -1.29 0.000792 1.34 -- -1.11 -0.221 1.51 1.901 728 -- --
53.21 0.34 10.8 -1.34 0.139 1.34 -- -- -0.239 1.65 1.064 786 -- --
51.85 0.335 10.8 -1.32 -- 1.31 -- -1.06 -0.242 -- 1.2 728 -- --
54.77 0.347 10.8 -1.46 1.04 -- -1.02 -- -0.309 5.55 -- -- -- --
57.2 0.354 10.8 -1.46 1.04 -- -- -- -0.304 5.72 -- -- -- --
53.6 0.341 10.8 -1.35 -- 1.33 -- -- -0.254 -- 1.02 743 -- --
100.04 0.466 10.8 -- 0.156 1.46 -- -- -0.111 1.28 0.009931 804 -- --
113.08 0.497 10.8 -1.43 -- -- -- -- -0.279 -- -- -- -- --
113.73 0.499 10.8 -- 1.01 -- -- -- -0.141 5.79 -- -- -- --
100.57 0.467 10.8 -- -- 1.45 -- -- -0.108 -- 0.001259 767 -- --
167.16 0.603 10.8 -- -- -- -- -- -0.12 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 43.57 humidity 60 720 > th dose independent rect. 16 14
2 43.64 humidity 60 720 > th dose independent rect. 17 12
5 44.29 wind 9 14400 < th dose independent sin 8 NA
6 44.45 wind 9 14400 > th dose independent sin 8 NA
7 44.55 wind 9 14400 > th dose independent rect. 18 19
10 44.71 radiation 30 30 < th dose dependent rect. 23 20
12 44.73 wind 9 14400 > th dose independent rect. 20 17
13 44.75 wind 7 14400 > th dose dependent rect. 20 18
18 44.84 wind 9 14400 > th dose dependent sin 8 NA
21 44.92 wind 9 14400 < th dose independent rect. 18 20
23 44.96 humidity 60 720 > th dose independent rect. 16 7
29 45.04 temperature 30 720 < th dose independent rect. 17 12
30 45.04 humidity 50 720 > th dose independent rect. 8 15
32 45.07 wind 9 14400 > th dose independent rect. 17 21
38 45.16 humidity 50 720 > th dose independent rect. 11 9
45 45.24 humidity 60 720 > th dose independent rect. 17 10
48 45.30 wind 7 14400 > th dose independent sin 6 NA
52 45.35 wind 9 14400 < th dose independent rect. 20 18
63 45.40 temperature 30 720 < th dose independent rect. 17 4
68 45.46 radiation 10 10 < th dose independent rect. 23 20
83 45.55 humidity 80 720 < th dose dependent rect. 15 4
88 45.59 wind 9 43200 > th dose dependent rect. 13 1
93 45.61 wind 1 43200 < th dose dependent rect. 4 1
107 45.71 temperature 30 720 < th dose independent rect. 18 9
122 45.77 wind 9 43200 > th dose independent rect. 13 1
137 45.80 wind 3 14400 > th dose dependent rect. 24 15
145 45.84 wind 9 14400 < th dose independent rect. 13 23
151 45.87 humidity 50 720 > th dose independent rect. 11 17
155 45.89 wind 9 14400 > th dose dependent rect. 13 23
157 45.90 humidity 60 720 > th dose independent sin 13 NA
158 45.90 wind 7 14400 > th dose independent rect. 23 16
160 45.90 humidity 50 720 > th dose independent rect. 15 22
161 45.90 wind 9 14400 < th dose independent rect. 9 23
162 45.90 wind 9 14400 > th dose dependent no NA NA
163 45.90 humidity 70 720 < th dose dependent sin 12 NA
164 45.90 wind 9 14400 > th dose dependent rect. 3 21
167 45.90 wind 9 14400 > th dose dependent rect. 10 22
173 45.90 wind 9 14400 > th dose dependent rect. 23 23
175 45.91 wind 9 14400 < th dose independent rect. 22 23
178 45.92 wind 9 14400 < th dose independent no NA NA
182 45.92 humidity 50 720 > th dose independent rect. 8 23
185 45.92 wind 9 14400 > th dose dependent rect. 3 19
190 45.93 wind 7 14400 > th dose independent rect. 2 13
194 45.93 wind 9 14400 < th dose independent rect. 2 23
214 45.95 radiation 40 43200 < th dose independent rect. 10 1
218 45.95 wind 9 14400 < th dose independent rect. 7 23
238 45.96 wind 9 14400 < th dose independent rect. 20 23
262 46.00 wind 9 43200 < th dose independent rect. 13 1
292 46.04 wind 9 14400 > th dose independent rect. 14 23
306 46.04 humidity 70 720 < th dose dependent rect. 15 18
314 46.05 wind 7 14400 > th dose dependent rect. 1 14
362 46.13 radiation 40 43200 > th dose independent rect. 10 1
432 46.21 wind 9 14400 > th dose independent no NA NA
433 46.21 wind 9 14400 > th dose independent rect. 3 21
438 46.21 wind 9 14400 > th dose independent rect. 9 23
446 46.22 humidity 50 720 > th dose independent rect. 1 19
463 46.23 wind 9 14400 > th dose independent rect. 20 23
464 46.23 wind 9 14400 > th dose independent rect. 22 23
473 46.24 humidity 50 720 > th dose independent rect. 9 20
474 46.24 wind 1 43200 < th dose dependent rect. 23 4
509 46.26 wind 9 14400 > th dose independent rect. 7 23
546 46.30 humidity 60 720 < th dose independent sin 12 NA
584 46.33 humidity 70 720 < th dose independent rect. 15 4
653 46.37 wind 9 14400 > th dose dependent rect. 10 14
690 46.39 wind 9 14400 > th dose dependent rect. 10 12
758 46.44 wind 9 14400 > th dose dependent sin 18 NA
759 46.44 humidity 50 720 > th dose dependent rect. 17 4
780 46.46 humidity 50 720 > th dose independent rect. 24 23
785 46.47 radiation 30 43200 < th dose independent rect. 17 3
797 46.48 radiation 40 43200 < th dose independent rect. 15 21
817 46.50 humidity 60 720 < th dose independent rect. 15 18
948 46.59 radiation 30 43200 > th dose dependent rect. 10 1
953 46.60 radiation 40 43200 < th dose independent rect. 7 5