Os03g0166200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein.
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Os03g0166200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Prolyl 4-hydroxylase alpha-1 subunit-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.75 | 0.529 | 4.69 | 3.15 | 0.737 | -2.04 | 1.64 | -4.17 | 0.242 | 23.9 | 30.33 | 10 | -- | -- |
| 143.66 | 0.563 | 4.78 | 2.44 | 0.699 | -1.96 | 0.466 | -- | 0.0717 | 23.4 | 30.33 | 10 | -- | -- |
| 135.02 | 0.541 | 4.72 | 2.85 | 0.698 | -1.96 | -- | -2.68 | 0.19 | 23.7 | 30.4 | 3 | -- | -- |
| 144.11 | 0.559 | 4.77 | 2.41 | 0.689 | -2.03 | -- | -- | 0.0791 | 23.6 | 31.34 | 10 | -- | -- |
| 159.42 | 0.588 | 4.68 | 2.99 | -- | -1.42 | -- | -2.65 | 0.305 | -- | 31.22 | 4 | -- | -- |
| 193.9 | 0.653 | 4.69 | 2.89 | 0.461 | -- | 0.934 | -- | 0.435 | 19.2 | -- | -- | -- | -- |
| 196.22 | 0.656 | 4.69 | 2.88 | 0.463 | -- | -- | -- | 0.437 | 19.1 | -- | -- | -- | -- |
| 152.15 | 0.574 | 4.74 | 2.43 | -- | -1.9 | -- | -- | 0.153 | -- | 42.62 | 553 | -- | -- |
| 284.28 | 0.785 | 4.85 | -- | 0.886 | -3.45 | -- | -- | -0.289 | 1.36 | 43.04 | 92 | -- | -- |
| 207.53 | 0.673 | 4.68 | 2.87 | -- | -- | -- | -- | 0.429 | -- | -- | -- | -- | -- |
| 414.22 | 0.952 | 4.76 | -- | 0.436 | -- | -- | -- | 0.117 | 19.6 | -- | -- | -- | -- |
| 185.92 | 0.635 | 4.92 | -- | -- | -2.49 | -- | -- | -0.622 | -- | 28.25 | 47520 | -- | -- |
| 424.39 | 0.962 | 4.75 | -- | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 2 | 126.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 4 | 126.82 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 5 | 127.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 8 | 127.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 9 | 127.61 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 14 | 128.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 15 | 128.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 16 | 128.72 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 20 | 129.23 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 21 | 129.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 22 | 129.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 23 | 129.33 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 27 | 129.55 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 28 | 129.67 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 30 | 129.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 55 | 131.29 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 60 | 131.51 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 65 | 131.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 74 | 132.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 87 | 132.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 108 | 133.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 113 | 133.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 121 | 134.20 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 132 | 134.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 156 | 135.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 22 |
| 162 | 135.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 165 | 135.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 170 | 135.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 215 | 136.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 16 |
| 221 | 136.36 | temperature | 20 | 270 | > th | dose dependent | sin | 8 | NA |
| 261 | 136.73 | temperature | 10 | 90 | > th | dose dependent | sin | 7 | NA |
| 311 | 137.14 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 378 | 137.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 408 | 137.84 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 455 | 138.10 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 456 | 138.12 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 474 | 138.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 476 | 138.20 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 552 | 138.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 824 | 139.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 832 | 139.58 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 925 | 139.91 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 983 | 140.11 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 17 |