BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0160400 Os03g0160400|AK068372
(959 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0160400 Similar to ACL098Cp 1998 0.0
Os03g0586900 Putative DNA helicase family protein 185 2e-46
Os07g0495900 Similar to Regulator of nonsense transcripts 1... 175 2e-43
Os04g0588200 Conserved hypothetical protein 133 6e-31
Os09g0130800 DEAD/DEAH box helicase, N-terminal domain cont... 129 1e-29
Os06g0310200 Conserved hypothetical protein 126 9e-29
Os04g0424200 Conserved hypothetical protein 125 1e-28
AK110123 125 1e-28
Os03g0440200 Conserved hypothetical protein 124 3e-28
Os04g0599600 121 3e-27
Os04g0582000 Conserved hypothetical protein 120 5e-27
Os02g0704300 Conserved hypothetical protein 107 3e-23
Os10g0537600 Conserved hypothetical protein 101 4e-21
Os11g0649000 77 8e-14
Os10g0118900 Conserved hypothetical protein 76 1e-13
Os11g0648500 70 1e-11
>Os03g0160400 Similar to ACL098Cp
Length = 959
Score = 1998 bits (5176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 959/959 (100%), Positives = 959/959 (100%)
Query: 1 MGTYVRNYSDDEFSVAGEKPDVEFMDYQNDGSIQDYSLEDAPVVVTVPFPFIDGKPKSVL 60
MGTYVRNYSDDEFSVAGEKPDVEFMDYQNDGSIQDYSLEDAPVVVTVPFPFIDGKPKSVL
Sbjct: 1 MGTYVRNYSDDEFSVAGEKPDVEFMDYQNDGSIQDYSLEDAPVVVTVPFPFIDGKPKSVL 60
Query: 61 VGETSADTISIENTSSEPVNLWSVRIFSSNPEDSYVLSMMKPPLNDTDEEAKRNFLGLTS 120
VGETSADTISIENTSSEPVNLWSVRIFSSNPEDSYVLSMMKPPLNDTDEEAKRNFLGLTS
Sbjct: 61 VGETSADTISIENTSSEPVNLWSVRIFSSNPEDSYVLSMMKPPLNDTDEEAKRNFLGLTS 120
Query: 121 VEDRTLQPGQTLTIWLSCTPKDIGLHTSIVHVDIGDEKIERVAFLLADDNVSQALFSDKP 180
VEDRTLQPGQTLTIWLSCTPKDIGLHTSIVHVDIGDEKIERVAFLLADDNVSQALFSDKP
Sbjct: 121 VEDRTLQPGQTLTIWLSCTPKDIGLHTSIVHVDIGDEKIERVAFLLADDNVSQALFSDKP 180
Query: 181 YSRKHTQKKKFECSSFVPGCRPTRQHSQGFKFKLPQFAIPADIRELIQSKQRPDVLSEEL 240
YSRKHTQKKKFECSSFVPGCRPTRQHSQGFKFKLPQFAIPADIRELIQSKQRPDVLSEEL
Sbjct: 181 YSRKHTQKKKFECSSFVPGCRPTRQHSQGFKFKLPQFAIPADIRELIQSKQRPDVLSEEL 240
Query: 241 NMTNYAKFFSTLLVMEEINLEEEMRSYDMERILMRRRGLEFLSLEVPGLAEKRPSLVHGD 300
NMTNYAKFFSTLLVMEEINLEEEMRSYDMERILMRRRGLEFLSLEVPGLAEKRPSLVHGD
Sbjct: 241 NMTNYAKFFSTLLVMEEINLEEEMRSYDMERILMRRRGLEFLSLEVPGLAEKRPSLVHGD 300
Query: 301 FIFVRHAGSDARPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQYDVSFTYNRLNMRRLYK 360
FIFVRHAGSDARPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQYDVSFTYNRLNMRRLYK
Sbjct: 301 FIFVRHAGSDARPYQGFIHKVEADEIFLKFDNQFHLAHRDRNQYDVSFTYNRLNMRRLYK 360
Query: 361 AIHEAELLGPDILFPCRSSSGSVKKGPFKPLNPHINTEQADAVATILGCRGVAPYVIYGP 420
AIHEAELLGPDILFPCRSSSGSVKKGPFKPLNPHINTEQADAVATILGCRGVAPYVIYGP
Sbjct: 361 AIHEAELLGPDILFPCRSSSGSVKKGPFKPLNPHINTEQADAVATILGCRGVAPYVIYGP 420
Query: 421 PGTGKTMTLVESILQLYTAKRRANVLICAASNSAADHVLAKLLQASYLIRPSDIFRLNAA 480
PGTGKTMTLVESILQLYTAKRRANVLICAASNSAADHVLAKLLQASYLIRPSDIFRLNAA
Sbjct: 421 PGTGKTMTLVESILQLYTAKRRANVLICAASNSAADHVLAKLLQASYLIRPSDIFRLNAA 480
Query: 481 SRQYEDVDPDFIRFCFFQDMVFKCPPLQALLRYKIVISTYMSSSMLQSEGIRRGHFTHIF 540
SRQYEDVDPDFIRFCFFQDMVFKCPPLQALLRYKIVISTYMSSSMLQSEGIRRGHFTHIF
Sbjct: 481 SRQYEDVDPDFIRFCFFQDMVFKCPPLQALLRYKIVISTYMSSSMLQSEGIRRGHFTHIF 540
Query: 541 LDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFE 600
LDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFE
Sbjct: 541 LDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFE 600
Query: 601 YEQYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELIACKEDEVSSIYDSIDLPNKSF 660
YEQYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELIACKEDEVSSIYDSIDLPNKSF
Sbjct: 601 YEQYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELIACKEDEVSSIYDSIDLPNKSF 660
Query: 661 PVLFVGIQGCDEREGNNPSWFNRIEASKVVNIIRNLTRGGDVREADIGVITPYRQQVVKI 720
PVLFVGIQGCDEREGNNPSWFNRIEASKVVNIIRNLTRGGDVREADIGVITPYRQQVVKI
Sbjct: 661 PVLFVGIQGCDEREGNNPSWFNRIEASKVVNIIRNLTRGGDVREADIGVITPYRQQVVKI 720
Query: 721 KKALETFEMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNVA 780
KKALETFEMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNVA
Sbjct: 721 KKALETFEMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNVA 780
Query: 781 ITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNGSYQGCPLPPPEETQVSGFRDSQDEPA 840
ITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNGSYQGCPLPPPEETQVSGFRDSQDEPA
Sbjct: 781 ITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNGSYQGCPLPPPEETQVSGFRDSQDEPA 840
Query: 841 RWGYNQQQESSANYSYKQDPHDSGSEHVNGLPSTENEVEWSEKTLNEEHQPCSSAAEADS 900
RWGYNQQQESSANYSYKQDPHDSGSEHVNGLPSTENEVEWSEKTLNEEHQPCSSAAEADS
Sbjct: 841 RWGYNQQQESSANYSYKQDPHDSGSEHVNGLPSTENEVEWSEKTLNEEHQPCSSAAEADS 900
Query: 901 PEFMLKQKAEEEEHVEQDGVQPEQCPAKDNKLQDAYAAKYSFPPEWCDVSNIPATGWDD 959
PEFMLKQKAEEEEHVEQDGVQPEQCPAKDNKLQDAYAAKYSFPPEWCDVSNIPATGWDD
Sbjct: 901 PEFMLKQKAEEEEHVEQDGVQPEQCPAKDNKLQDAYAAKYSFPPEWCDVSNIPATGWDD 959
>Os03g0586900 Putative DNA helicase family protein
Length = 651
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 169/566 (29%), Positives = 264/566 (46%), Gaps = 87/566 (15%)
Query: 307 AGSDARPYQGFIHKVEADEIFLKFDN--QFHLAHRDR-NQYDVSFTYNRLN--MRRLYKA 361
AGS A QG +++++ I + FD+ + L R + TY R+ + +L K
Sbjct: 109 AGSAALG-QGVVYRLKDSSITVAFDDIPEDGLNSPLRLEKLANEVTYRRMKDALVQLSKG 167
Query: 362 IHEAELLGPD-----ILFPCRSSSGSVKKGPFKPLNPHINTEQADAVATILGCRGVAPYV 416
I GP +LF S F P N +++ Q DA++ L R V ++
Sbjct: 168 IQT----GPSANLIPVLFGENPPMSSKDVAKFSPFNKNLDESQKDAISKALRSRDV--FL 221
Query: 417 IYGPPGTGKTMTLVESILQLYTAKRRANVLICAASNSAADHVLAKLLQ-ASYLIRPSDIF 475
++GPPGTGKT T++E ILQ KR + +L CAASN A D+++ +L + + L+R
Sbjct: 222 LHGPPGTGKTTTIIEIILQ--EVKRGSKILACAASNIAVDNIVERLSRYRTKLVRLGHPA 279
Query: 476 RL------NAASRQYEDVDPDFIRFCFFQDM-VFKCPPLQA------------------- 509
RL +A Q D + ++M V L+A
Sbjct: 280 RLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKLLKAKDKNTKRDIRKELRTLAKE 339
Query: 510 ------------LLRYKIVISTYMSSSMLQSEGIRRGHFTHIFLDEAGQASEPEAMVPLS 557
+ +V+ST +S + +GI F + +DEA QA E + L
Sbjct: 340 ERKRQQLAVADVIKNADVVLSTLTGASSKKLDGI---TFDLVIIDEAAQALEMACWIALL 396
Query: 558 GLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFEYEQYSTGDPNYVTKLVR 617
+ VLAGD +QL P + +AEK G+GK+ +RL Y GD + L
Sbjct: 397 ----KGPRCVLAGDHLQLPPTIQSAEAEKKGMGKTLFERLTEAY-----GD-QITSMLTI 446
Query: 618 NYRCHPAILELPSELFYGGELIACKEDEVSSIYDSIDLPNKSFP---VLFVGIQGCD--E 672
YR H I+ S+ Y ++ A +YD ++ S ++ + GCD E
Sbjct: 447 QYRMHELIMNWSSKELYNNKIKAHSSVADHMLYDIEEVKRSSSTEPTIILIDTTGCDMEE 506
Query: 673 REGNNPSWFNRIEASKVVNIIRNLTRGGDVREADIGVITPYRQQV--VKIKKALETFEMP 730
+ S N EA+ + + L G VR +DIG+ITPY QV +K+ + +T ++
Sbjct: 507 VKDEEESTMNEGEAAVSIAHAKLLVESG-VRASDIGIITPYAAQVTCLKMMRNKDT-KLK 564
Query: 731 DLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNVAITRAKSLLII 790
DL++ +V+ FQG+E+E IIIS VRS K +GFLS+HRR NVA+TRA+ +
Sbjct: 565 DLEISTVDGFQGREKEAIIISMVRSNSKKE-------VGFLSDHRRMNVAVTRARRQCCL 617
Query: 791 IGNPHIITKDRHWDRLLRYCADNGSY 816
+ + ++ D+ RL+ Y +NG Y
Sbjct: 618 VCDVETVSNDKFLKRLVEYFEENGEY 643
>Os07g0495900 Similar to Regulator of nonsense transcripts 1 homolog
Length = 1013
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 259/570 (45%), Gaps = 89/570 (15%)
Query: 296 LVHGDFIFVRHAGSDARP-YQGFIHKVE---ADEIFLKFDNQFHLAHRDRNQYDVSFTYN 351
LV GD + +R++G + P +Q H ++ +E+ L+ + + + V F +
Sbjct: 135 LVPGDELRLRYSGDSSHPAWQSVGHVIKLTAQEEVALELRASQGVPVDLNHGFSVDFVWK 194
Query: 352 RLNMRRLYKAIHE-------------AELLGPDILFPCRSSSGSVKKGPFKPLNPHINTE 398
+ R+ A+ LLG ++ ++ + G P P +N
Sbjct: 195 STSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFG--APGLPELNAS 252
Query: 399 QADAVATILGCRGVAPYVIYGPPGTGKTMTLVESILQLYTAKRRANVLICAASNSAADHV 458
Q AV ++L + ++ +I GPPGTGKT+T + + + + VL+CA SN A D +
Sbjct: 253 QVLAVKSVL-QKPIS--LIQGPPGTGKTVTSAAIVYHM-AKQGQGQVLVCAPSNVAVDQL 308
Query: 459 LAKLLQASYLIRPSDIFRLNAASRQYEDVDPDFIRFCF---FQDMVFKCPPLQALLRYKI 515
K+ + RL A SR+ + + + D K L L + K
Sbjct: 309 AEKISSTGL-----KVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSE-LHKLQQLKD 362
Query: 516 VISTYMSSSMLQSEGIRRG---------------------------HFTHIFLDEAGQAS 548
SS + + ++R F + +DE+ QA+
Sbjct: 363 EQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLANFRFRQVLIDESTQAT 422
Query: 549 EPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFEYEQYSTGD 608
EPE ++PL + G VV L GD QLGPV+ CK+A + GL +S +RL+ G
Sbjct: 423 EPECLIPL--VLGVKQVV-LVGDHCQLGPVIMCKKAARAGLAQSLFERLVI------LGV 473
Query: 609 PNYVTKLVRNYRCHPAILELPSELFYGGEL---IACKEDEVSSIYDSIDLPNKSFPVLFV 665
+ +L YR HP + + PS FY G L + E + I +PN+ P+ F
Sbjct: 474 KPF--RLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNR--PMFFY 529
Query: 666 GIQGCDEREGNNPSWFNRIEASKVVNIIRNLTRGGDVREADIGVITPYRQQVVKI----- 720
G +E + S+ NR EA+ V I+ R G V + IGVITPY Q I
Sbjct: 530 VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSG-VVPSQIGVITPYEGQRAYIVNYMS 588
Query: 721 -KKALETFEMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNV 779
+L +++V SV+ FQG+E++ II+S VRS NE +GFL++ RR NV
Sbjct: 589 RNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRS----NEHQ---GIGFLNDPRRLNV 641
Query: 780 AITRAKSLLIIIGNPHIITKDRHWDRLLRY 809
A+TRA+ ++I+GNP +++K W+ LL +
Sbjct: 642 ALTRARYGIVILGNPKVLSKQPLWNSLLTH 671
>Os04g0588200 Conserved hypothetical protein
Length = 1287
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 230/500 (46%), Gaps = 66/500 (13%)
Query: 323 ADEIFLKFDNQFHLAHRDRNQYDVSFTYNRLNMRRLY----KAIHEAELLGPDILFPCRS 378
++ + + D Q + D+++ SF RLN+ +L+ + H +L+ D+ P
Sbjct: 790 SNSLLEQGDLQCEVWRIDKDESVSSFATMRLNLVQLFAENPQNSHLRKLI-VDLEAPRFD 848
Query: 379 SSGSVKKGP---FKPLNPHINTEQADAVATILGCRGVAPYVIYGPPGTGKTMTLVESILQ 435
S G + + P + P++N +Q ++ IL + A +I G PGTGKT T+V ++
Sbjct: 849 SGGLLSQDPALSYIQSLPNLNNDQQRSLHKILAAKDYA--LILGMPGTGKTYTMVHAVKS 906
Query: 436 LYTAKRRANVLICAASNSAADHVLAKLLQASYLIRPSDIFRLNAASRQYEDVDPDFIRFC 495
L R ++L+ + +NSA D++L KL D R+ ++E V PD C
Sbjct: 907 LLM--RGESILLTSYTNSAIDNLLMKLKAEGV-----DFLRIG----RHEAVHPDVKGHC 955
Query: 496 FFQDMVFKCPPLQALLRYKIVISTYMSSSMLQSEGIRRGHFTHIFLDEAGQASEPEAMVP 555
+ ++A R + V ++ + + F +DEAGQ + P ++ P
Sbjct: 956 LSTTDIQSVDAVKA--RMEQVQVVGVTCLGIYHPLLAHKKFDTCIMDEAGQITLPVSLGP 1013
Query: 556 LSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFEYEQYSTGDPNYVTKL 615
L T VL GD QL P+V +A ++G+G S RL S P ++ L
Sbjct: 1014 LM----LATKFVLVGDHYQLPPLVQSSEARENGMGVSLFWRL-------SEAHPQAISAL 1062
Query: 616 VRNYRCHPAILELPSELFYGGELIACKEDEVSSIYDSI-----------DLPNKSFPVLF 664
YR I+EL + L YG L +C E+++ + ++ N V+F
Sbjct: 1063 RCQYRMSSGIMELSNSLIYGNRL-SCGSLEIANAKLKLSGRGPVRLKLKEILNPDRAVVF 1121
Query: 665 V------GIQGCDEREGNNPSWFNRIEASKVVNIIRNLTRGGDVREADIGVITPYRQQVV 718
+ + R NNP+ EA V I L + G V + +G+ITPY Q
Sbjct: 1122 ANTDEVPAFEAKEHRTVNNPT-----EALIVSWITNELLKRG-VAQDGVGIITPYNAQAN 1175
Query: 719 KIKKALETFEMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLSNHRRFN 778
I++ ++ ++V +++++QG+++E II+S VRS N + L + R N
Sbjct: 1176 LIQQHVDA----SVEVHTIDKYQGRDKECIIVSFVRS----NGNTRASGSSLLGDWHRIN 1227
Query: 779 VAITRAKSLLIIIGNPHIIT 798
V +TRAK LI++G+ ++
Sbjct: 1228 VVLTRAKKKLIMVGSAATLS 1247
>Os09g0130800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 981
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 205/466 (43%), Gaps = 78/466 (16%)
Query: 404 ATILGCRGVAP-YVIYGPPGTGKTMTLVESILQLYTAKRRANVLICAASNSAADHVLAKL 462
A LG P +I GPPGTGKT L S L ++ VL+ A SN+A D+++ KL
Sbjct: 512 AITLGLNNKRPVLIIQGPPGTGKTGLL--SYLIACAVRKGERVLVTAPSNAAVDNMVEKL 569
Query: 463 ----LQASYLIRPSDIF--------------RLNAASRQYEDVDPDF---IRFCFFQDMV 501
L + P+ I RL + ++E D ++ C D +
Sbjct: 570 SDTGLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLKHCIQDDTL 629
Query: 502 FKCPPLQALLRY----------KIVISTYMSSSMLQSEGI--------RRGHFTHIFLDE 543
++ LL+ +I+ ++ ++ S I R G F + +DE
Sbjct: 630 --AAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFDLVIIDE 687
Query: 544 AGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFEYEQ 603
AGQA EP +P+ L G+ +LAGD QL PVV ++A + GL S L+R + +
Sbjct: 688 AGQAIEPSCWIPI--LQGKR--CILAGDQRQLAPVVLSREAMQGGLAMSLLERASSLHNE 743
Query: 604 YSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELIACKEDEVSSIYD------------ 651
T TKL YR H +I S Y G L + + D
Sbjct: 744 LLT------TKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRC 797
Query: 652 SIDLPNKSFPVLFVGIQGCDER--EGNNPSWFNRIEASKVVNIIRNLTRGGDVREADIGV 709
+ L + P + I C+E S++N EA V + NL + G V I V
Sbjct: 798 AFLLLDTRMPYGSLNID-CEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCG-VSPTAIAV 855
Query: 710 ITPYRQQVVKIKKALETF-EMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNL 768
+PY QV ++ LE + E ++V +++ FQG+E + ++IS VRS + +
Sbjct: 856 QSPYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGREADAVVISMVRS-------NTLGAV 908
Query: 769 GFLSNHRRFNVAITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNG 814
GFL ++RR NVAITRA+ + ++ + I + RLLR+ +G
Sbjct: 909 GFLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHG 954
>Os06g0310200 Conserved hypothetical protein
Length = 1029
Score = 126 bits (316), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 181/410 (44%), Gaps = 70/410 (17%)
Query: 440 KRRANVLICAASNSAADHVLAKLLQASYLIRPSDIFRLNAASRQYEDVDPDFIRFCFFQD 499
K RA+VL+CA SNSA D ++ ++LQ ++ + +P +R
Sbjct: 407 KYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTY------------NPKIVRIGLKAH 454
Query: 500 MVFKCPPLQALLRYKIVISTYMSSSMLQSEGIRRGHFTHIFLDEAGQASEPEAMVPLSGL 559
K + L++ K +S S+G RRG + D + EA + S L
Sbjct: 455 HSVKAVSMDYLIQQK------LSGVDRSSDGGRRGAGEY---DRIRSSILDEAAIVFSTL 505
Query: 560 C------------GRDTVVV-----LAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFEYE 602
D V++ GDP+QL V A+K G G S +R
Sbjct: 506 SFSGSSIFSRMARAFDVVIIDEAAQAVGDPVQLPATVISSTAQKLGYGTSLFKRF----- 560
Query: 603 QYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELIACKEDEVSSIYDSIDLPNKSF-- 660
+ G P + K+ YR HP I PS+ FY G L ED S P S+
Sbjct: 561 -QAAGFPVQMLKI--QYRMHPEISIFPSKEFYEGVL----EDGEGL---SKKRPWHSYSC 610
Query: 661 --PVLFVGIQGCDEREGNNPSWFNRIEASKVVNIIRNLT-RGGDVREAD-IGVITPYRQQ 716
P F + G + + + SW N E + + + R +++ + + VI+PYR Q
Sbjct: 611 FGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQ 670
Query: 717 VVKIKKALE-TF---EMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLS 772
V +K TF + V +V+ FQG+E+E++I S VR +K +GF+S
Sbjct: 671 VKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRC-------NKEQKIGFVS 723
Query: 773 NHRRFNVAITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNGSYQGCPLP 822
+ RR NVAITRA+S ++++G+ + +D+HW+ L+ + G Y P P
Sbjct: 724 DFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKP 773
>Os04g0424200 Conserved hypothetical protein
Length = 836
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 181/410 (44%), Gaps = 70/410 (17%)
Query: 440 KRRANVLICAASNSAADHVLAKLLQASYLIRPSDIFRLNAASRQYEDVDPDFIRFCFFQD 499
K RA+VL+CA SNSA D ++ ++LQ ++ + +P +R
Sbjct: 377 KYRAHVLVCAPSNSALDEIVLRVLQIGIRDENNNTY------------NPKIVRIGLKAH 424
Query: 500 MVFKCPPLQALLRYKIVISTYMSSSMLQSEGIRRGHFTHIFLDEAGQASEPEAMVPLSGL 559
K + L++ K +S S+G RRG + D + EA + S L
Sbjct: 425 HSVKAVSMDYLIQQK------LSGVDRSSDGGRRGAGEY---DRIRSSILDEAAIVFSTL 475
Query: 560 C------------GRDTVVV-----LAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFEYE 602
D V++ GDP+QL V A+K G G S +R
Sbjct: 476 SFSGSSIFSRMARAFDVVIIDEAAQAVGDPVQLPATVISSTAQKLGYGTSLFKRF----- 530
Query: 603 QYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELIACKEDEVSSIYDSIDLPNKSF-- 660
+ G P + K+ YR HP I PS+ FY G L ED S P S+
Sbjct: 531 -QAAGFPVQMLKI--QYRMHPEISIFPSKEFYEGVL----EDGEGL---SKKRPWHSYSC 580
Query: 661 --PVLFVGIQGCDEREGNNPSWFNRIEASKVVNIIRNLT-RGGDVREAD-IGVITPYRQQ 716
P F + G + + + SW N E + + + R +++ + + VI+PYR Q
Sbjct: 581 FGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQ 640
Query: 717 VVKIKKALE-TF---EMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLS 772
V +K TF + V +V+ FQG+E+E++I S VR +K +GF+S
Sbjct: 641 VKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRC-------NKEQKIGFVS 693
Query: 773 NHRRFNVAITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNGSYQGCPLP 822
+ RR NVAITRA+S ++++G+ + +D+HW+ L+ + G Y P P
Sbjct: 694 DFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKP 743
>AK110123
Length = 1098
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 147/278 (52%), Gaps = 35/278 (12%)
Query: 539 IFLDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLL 598
+F DEA A+EP ++VPL C +++ GD QL PVV +A++ GL KS +RL+
Sbjct: 751 VFFDEASMATEPVSLVPLMKGCRHLSII---GDHKQLPPVVTSAEAKQGGLSKSLFERLI 807
Query: 599 FEYEQYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGEL-IACKEDEVSSI----YDSI 653
+ P+ T L +R HP + E P++ FY G L D++ ++ + +
Sbjct: 808 ESTAADGSKIPS--TMLNVQFRMHPRLAEFPNKTFYSGALENGSGTDKIPAVESGYWPQV 865
Query: 654 DLPNKSFPVLFVGIQGCDEREGNNPSWFNRIEASKVVNIIRN-LTRGGDVREADIGVITP 712
+ +++ + F+ +G + + N+ S N EA V++ + L R D+ DIG++TP
Sbjct: 866 EGKDEAHRLCFIDHKGRESKADNSLSLCNVAEARLAVDVAMDVLRRNPDLTGDDIGIVTP 925
Query: 713 YRQQVVKIKKAL-----------------ETFEMPDLKVGSVEQFQGQEREIIIISTVRS 755
Y Q + ++K L + ++ + V +V+ F+G+E+++I+ STVR+
Sbjct: 926 YAGQQILLEKMLHNDTSAERRRAAGALGARSSQLGCIDVHTVDGFEGREKKVILFSTVRT 985
Query: 756 TVKHNEFDKFFNLGFLSNHRRFNVAITRAKSLLIIIGN 793
+ +GFL++ RR NVA+TRA+S L ++GN
Sbjct: 986 NAQGY-------VGFLADGRRLNVALTRAQSALFVLGN 1016
>Os03g0440200 Conserved hypothetical protein
Length = 824
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 180/410 (43%), Gaps = 70/410 (17%)
Query: 440 KRRANVLICAASNSAADHVLAKLLQASYLIRPSDIFRLNAASRQYEDVDPDFIRFCFFQD 499
K RA+VL+CA SNSA D ++ ++LQ ++ + +P +R
Sbjct: 377 KYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTY------------NPKIVRIGLKAH 424
Query: 500 MVFKCPPLQALLRYKIVISTYMSSSMLQSEGIRRGHFTHIFLDEAGQASEPEAMVPLSGL 559
K + L++ K +S S+G RRG + D + EA + S L
Sbjct: 425 HSVKAVSMDYLIQQK------LSGVDRSSDGGRRGAGEY---DRIRSSILDEAAIVFSTL 475
Query: 560 C------------GRDTVVV-----LAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFEYE 602
D V++ GDP+QL V A+K G G S +R
Sbjct: 476 SFSGSSIFSRMARAFDVVIIDEAAQAVGDPVQLPATVISSTAQKLGYGTSLFKRF----- 530
Query: 603 QYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELIACKEDEVSSIYDSIDLPNKSF-- 660
+ G P + K+ YR HP I PS+ FY G L ED S P S+
Sbjct: 531 -QAAGFPVQMLKI--QYRMHPEISIFPSKEFYEGVL----EDGEGL---SKKRPWHSYSC 580
Query: 661 --PVLFVGIQGCDEREGNNPSWFNRIEASKVVNIIRNLT-RGGDVREAD-IGVITPYRQQ 716
P F + G + + + SW N E + + + R +++ + + VI+PYR Q
Sbjct: 581 FGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQ 640
Query: 717 VVKIKKALE-TF---EMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLS 772
V +K TF + V +V+ FQG E+E++I S VR +K +GF+S
Sbjct: 641 VKLLKDHFRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRC-------NKEQKIGFVS 693
Query: 773 NHRRFNVAITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNGSYQGCPLP 822
+ RR NVAITRA+S ++++G+ + +D+HW+ L+ + G Y P P
Sbjct: 694 DFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKP 743
>Os04g0599600
Length = 923
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 149/271 (54%), Gaps = 35/271 (12%)
Query: 539 IFLDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLL 598
+ +DEA Q E E ++PL + VVL GD QL P+V + ++ G G S +RL+
Sbjct: 556 LIVDEAAQVRECELIIPLRLHWLKH--VVLVGDDCQLRPMVKSQVCKEAGFGISLFERLV 613
Query: 599 -FEYEQYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELIACKEDEVSSIY--DSIDL 655
++E++ L YR P I P+ FYG +++ + +SS+Y D +L
Sbjct: 614 VLDFEKH---------LLNIQYRMDPRISLFPNVQFYGRKILD-GPNVMSSVYNKDYTNL 663
Query: 656 PNKSFPVLFVGIQ-GCDEREGNNPSWFNRIEASKVVNIIRNL----TRGGDVREADIGVI 710
P ++ F+ I G +E+EG SW N +E + V+++I+ + R G + IGVI
Sbjct: 664 PFGTYA--FINISDGREEKEGTGNSWRNLVEVAVVLHLIQTIFKTWKRKGQM--LSIGVI 719
Query: 711 TPYRQQVVKIKKAL----ETFEMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFF 766
+PY QV I+ L +T + ++V SV+ FQG+E +III+STVRS VK
Sbjct: 720 SPYSSQVDSIESRLGKLYDTCDGFHVRVKSVDGFQGEEDDIIILSTVRSNVKG------- 772
Query: 767 NLGFLSNHRRFNVAITRAKSLLIIIGNPHII 797
+GFL++ +R NVA+TRA+ L I+GN + +
Sbjct: 773 IVGFLADEQRTNVALTRARHCLWILGNANTL 803
>Os04g0582000 Conserved hypothetical protein
Length = 813
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 177/358 (49%), Gaps = 40/358 (11%)
Query: 489 PDFIRFCFFQDMVFKCPPLQALLRYKIVISTYMSSSML-------QSEGIRRGHFTHIFL 541
PD+ R D + + L R K ++ T SS +L +SE ++ + +
Sbjct: 442 PDWDRLSLSDDDRKREIRVYLLQRTKCILCTVSSSYVLHNVSMDDRSECLK--PLELLVV 499
Query: 542 DEAGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFEY 601
DEA Q E E ++P+ L G V + GD QL +V K ++ G+S +RL
Sbjct: 500 DEAAQLKECETLIPMQ-LPGIKQAVFI-GDECQLPALVKSKISDNADFGRSVFERL---- 553
Query: 602 EQYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELIACKEDEVSSIYDSIDLPNKSF- 660
S G ++ + YR P I + P FY G+ I+ + VS Y LP K F
Sbjct: 554 --SSLGYNKHLLNI--QYRMRPEISKFPVASFYDGK-ISDGPNVVSKNYKRNILPGKMFG 608
Query: 661 PVLFVGIQGCDER-EGNNPSWFNRIEASKVVNIIRNLTRGGDV--READIGVITPYRQQV 717
P F+ + G E E + S N IE + V+ I+R L + +GV++PY QV
Sbjct: 609 PYSFINVDGGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLTVGVVSPYNAQV 668
Query: 718 VKIKKAL-ETFEMPD---LKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLSN 773
I++ + +T++M D +KV SV+ FQG E ++IIISTVRS ++ ++GFL+N
Sbjct: 669 RAIQEKIGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRS-------NRAGSVGFLTN 721
Query: 774 HRRFNVAITRAKSLLIIIGNPHIITKDRH-WDRLLRYCADNGSYQGCPLPPPEETQVS 830
+R N+A+TRAK L I+GN ++ R W +++ ++ ++GC E +S
Sbjct: 722 LQRTNMALTRAKHCLWIVGNGTTLSNSRSVWQKVV----NDAKHRGCFFEASEYKHLS 775
>Os02g0704300 Conserved hypothetical protein
Length = 331
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 161/344 (46%), Gaps = 38/344 (11%)
Query: 508 QALLRYKIVISTYMSSSMLQSEGIRRGH-FTHIFLDEAGQASEPEAMVPLSGLCGRDTVV 566
+AL ++V+ST ++ IRR F + +DEAGQA EP +P+ L G+ +
Sbjct: 4 EALSEAQVVLSTNTGAA---DPLIRRTCCFDLVIIDEAGQAIEPSCWIPI--LQGKRCI- 57
Query: 567 VLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLLFEYEQYSTGDPNYVTKLVRNYRCHPAIL 626
LAGD QL PV+ ++A GLGKS L+R S + T+L +R + +I
Sbjct: 58 -LAGDHCQLAPVILSRKALDGGLGKSLLER------ASSLHNGLLTTRLTVQHRMNDSIA 110
Query: 627 ELPSELFYGGELIACKEDEVSSIYDSIDLPNKSF---PVLFVGIQ--------GCDER-- 673
S+ Y G L + ++ DS + P+L + + GC E+
Sbjct: 111 SWASKEMYHGLLKSSHSVASQTLADSPVVKATWITRCPLLLLDTRMPYGALDTGCGEQID 170
Query: 674 EGNNPSWFNRIEASKVVNIIRNLTRGGDVREADIGVITPYRQQVVKIKKALETF-EMPDL 732
S++N EA V + NL G V I V +PY QV +++ LE + + +
Sbjct: 171 LSGTGSFYNDGEADIVTQHVLNLVHCG-VSPTAIAVQSPYIAQVQLLRERLEEYPGLSGV 229
Query: 733 KVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNVAITRAKSLLIIIG 792
+V +++ FQG+E + ++IS VRS + +GFL + RR NVAITRA + ++
Sbjct: 230 EVSTIDSFQGREADAVVISMVRS-------NPLGAVGFLGDSRRMNVAITRACRHVTVVC 282
Query: 793 NPHIITKDRHWDRLLRYCADNGSYQGCPLPPPEETQVSGFRDSQ 836
+ I RLLR+ G + + P VSG SQ
Sbjct: 283 DTSTICHSTFLARLLRHIRRYGQVK--HVVPGSLDGVSGLGFSQ 324
>Os10g0537600 Conserved hypothetical protein
Length = 985
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 136/289 (47%), Gaps = 31/289 (10%)
Query: 539 IFLDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPMQLGPVVYCKQAEKDGLGKSYLQRLL 598
+ +DEA Q E EA+VPL L ++L GD QL +V K A+ G+S +RL
Sbjct: 236 LVIDEAAQLKECEALVPL--LLPGIEHILLIGDENQLSSLVKSKIAKDADFGRSLYERLC 293
Query: 599 FEYEQYSTGDPNYVTKLVRNYRCHPAILELPSELFYGGELI----ACKEDEVSSIYDSID 654
+ G ++ ++ YR HP I + P+ FY + +ED + S
Sbjct: 294 ------TMGYRKHLLEV--QYRMHPGINKFPNANFYDNRISDGPSVQQEDYMKSYLPGPI 345
Query: 655 LPNKSFPVLFVGIQGCDEREGNNPSWFNRIEASKVVNIIRNLTR--GGDVREADIGVITP 712
SF + ++ DE S N +E + NI+ L + + +GVI+P
Sbjct: 346 YGAYSFIHIENDMEMLDEL---GQSSKNMVEVAVATNIVERLAKECSEKRQRTSLGVISP 402
Query: 713 YRQQVV----KIKKALETFEMPDLKVGSVEQFQGQEREIIIISTVRSTVKHNEFDKFFNL 768
Y QV+ ++ K + E + V S++ FQG E +II+ISTVRS +K +
Sbjct: 403 YTAQVIALQERLGKQFKNHEFLSVTVKSIDGFQGGEEDIILISTVRS-------NKNGKV 455
Query: 769 GFLSNHRRFNVAITRAKSLLIIIGN-PHIITKDRHWDRLLRYCADNGSY 816
GFLS+ R NVA+TRAK L I+GN ++ + W L+ G +
Sbjct: 456 GFLSDAGRINVALTRAKYCLWILGNGATLLASNSIWAELVHDSKRRGCF 504
>Os11g0649000
Length = 1148
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 141/306 (46%), Gaps = 41/306 (13%)
Query: 514 KIVISTYMSSSMLQSEGIRRGHFTHIFLDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPM 573
+I+I T + SS L+ ++ + +D+A Q E + ++PLS R +V+ GD +
Sbjct: 650 RIIICTPVCSSQLRE--LKLDTIDILLVDDAAQIKEIDMLIPLS-FSPRH--IVMFGDHL 704
Query: 574 QLGPVVYCKQAEKDGLGKSYLQRLLFEYEQYSTGDPNYVTKLVRNYRCHPAILELPSELF 633
L P+V + ++ G S QRL+ + +L + Y P+I + SE F
Sbjct: 705 HLQPMVKSEVCKEAGYASSLFQRLMHSSSENK--------RLTKQYMMDPSISQFVSENF 756
Query: 634 YGGELIACKEDEVSSIYDSIDLPNKSFPV---LFVGIQGCDEREGNNPSWFNRIEASKVV 690
Y G L +D+ + D + K FPV F I G DE G + +E+S ++
Sbjct: 757 YEGRL----KDDSTVKSDDYNKLLKEFPVPAYGFFDISGVDELTGKGKGF---VESSVIM 809
Query: 691 NIIRNLTRG--GDVREADIGVITPYRQQVVKIKKAL----ETFEMPDLKVGSVEQFQGQE 744
+++ L +G + + ++G+I Y ++ ++ L E + +++V S+ +
Sbjct: 810 FLLQFLCKGRTNAIGKINVGIICLYNNRMDALRNLLGIKYENHDRINIEVNSLGNLHEKW 869
Query: 745 REIIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNVAITRAKSLLIIIG-NPHIITKDRHW 803
+++I+S+V L + NVA +R++ L IIG ++I + W
Sbjct: 870 YDVVILSSVSDEKAE-----------LLEGSKMNVAFSRSRYCLWIIGEGKNLIASEDLW 918
Query: 804 DRLLRY 809
+L+ Y
Sbjct: 919 KKLIGY 924
>Os10g0118900 Conserved hypothetical protein
Length = 195
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 76/130 (58%), Gaps = 15/130 (11%)
Query: 685 EASKVVNIIRNLT---RGGDVREADIGVITPYRQQVVKIKKALE----TFEMPDLKVGSV 737
EA V+ + NL R ++A +G+ITPY+ Q+ +++ E T + D+ + +V
Sbjct: 5 EAQFVLRLYENLQKFLRANGGKKASVGIITPYKLQLKCLQREFEEVMSTEDGKDIYINTV 64
Query: 738 EQFQGQEREIIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNVAITRAKSLLIIIGNPHII 797
+ FQGQER++II+S VR++ H +GF+++ RR NVA+TRA+ L ++GN +
Sbjct: 65 DAFQGQERDVIIMSCVRAS-NHG-------VGFVADIRRMNVALTRARRALWVVGNAGAL 116
Query: 798 TKDRHWDRLL 807
+ W L+
Sbjct: 117 MQSEDWALLI 126
>Os11g0648500
Length = 1197
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 45/291 (15%)
Query: 515 IVISTYMSSSMLQSEGIRRGHFTHIFLDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPMQ 574
I+IST + LQS ++ + +D+A Q E + +VPLS + R VVL GD
Sbjct: 686 IIISTPGCFARLQS--LKMDQVDVLIVDKAAQIKENDLLVPLS-IPPRH--VVLLGDHQH 740
Query: 575 LGPVVYCKQAEKDGLGKSYLQRLL-FEYEQYSTGDPNYVTKLVRNYRCHPAILELPSELF 633
L P+V + ++ G +S QRLL + ++ KL++ Y HP I + PSE F
Sbjct: 741 LQPIVKTEGCKEAGCTRSLFQRLLHLSFTRH---------KLIKQYMMHPLIRQFPSEHF 791
Query: 634 YGGELIACKEDEVSSIYDSIDLPNKSFPV-LFVGIQGCDEREGNNPSWFNRIEASKVVNI 692
Y +++ + S++ N FP F + + E + +EA+ V+ +
Sbjct: 792 YKDKIVDGQ---------SVESINLQFPAYTFFDVV---DMEDFSCMGKKSMEAAVVLFL 839
Query: 693 IRNLTRG--GDVREADIGVITPYRQQV----VKIKKALETFEMPDLKVGSVEQFQGQERE 746
++ L G ++G++ QV ++ + + + +L+V S+E +
Sbjct: 840 LQKLCEGLTNAAGRLNVGIVCFCSNQVNAIITQLGRKYQNHDRVNLEVNSLENMHEDWYD 899
Query: 747 IIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNVAITRAKSLLIIIGNPHII 797
+II+S++ F + L R NVA+T+++ L IIG I+
Sbjct: 900 VIILSSL-----------FDDKSELPTDNRINVALTKSRHCLWIIGQADIL 939
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 34,006,646
Number of extensions: 1489032
Number of successful extensions: 3691
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 3637
Number of HSP's successfully gapped: 17
Length of query: 959
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 849
Effective length of database: 11,292,261
Effective search space: 9587129589
Effective search space used: 9587129589
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)