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Os10g0118900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0161) R2 : 0.00684
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0601 (0.0339) R2dN8 : 0.00883 R2N8 : 0.00684
σ : 0.303
deviance : 42.23
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.46 0.218 11.5 0.957 0.257 0.841 -0.179 -1.27 0.361 17.8 28.14 200 -- --
23.2 0.224 11.6 0.751 0.258 0.9 0.211 -- 0.318 17.4 27.48 186 -- --
21.51 0.216 11.5 0.942 0.255 0.849 -- -1.18 0.357 17.6 28.06 187 -- --
23.29 0.225 11.6 0.74 0.246 0.886 -- -- 0.307 17.6 27.28 186 -- --
23.21 0.224 11.5 0.816 -- 0.775 -- -0.808 0.292 -- 24.5 131 -- --
34.12 0.274 11.6 0.497 0.122 -- -0.266 -- 0.115 22.8 -- -- -- --
34.4 0.275 11.6 0.509 0.126 -- -- -- 0.116 22.2 -- -- -- --
24.17 0.229 11.6 0.723 -- 0.876 -- -- 0.268 -- 24.3 131 -- --
35.93 0.279 11.6 -- 0.14 0.583 -- -- 0.159 19.8 25.11 185 -- --
35.36 0.278 11.6 0.51 -- -- -- -- 0.117 -- -- -- -- --
41.22 0.3 11.6 -- 0.129 -- -- -- 0.0598 22.5 -- -- -- --
36.16 0.28 11.6 -- -- 0.596 -- -- 0.142 -- 24.2 40 -- --
42.23 0.303 11.6 -- -- -- -- -- 0.0601 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.49 temperature 30 270 < th dose dependent rect. 10 22
4 20.61 temperature 10 270 > th dose dependent rect. 6 23
8 20.87 temperature 15 90 > th dose dependent rect. 8 21
9 20.93 temperature 30 30 < th dose dependent rect. 5 23
26 21.46 temperature 30 270 < th dose dependent rect. 1 23
42 21.79 temperature 30 30 < th dose dependent rect. 5 21
52 21.90 temperature 30 90 < th dose dependent rect. 19 23
55 21.96 temperature 30 270 < th dose dependent no NA NA
74 22.13 temperature 15 270 > th dose dependent rect. 15 23
88 22.20 temperature 30 270 < th dose dependent rect. 16 23
103 22.34 temperature 10 90 > th dose dependent no NA NA
128 22.42 temperature 30 90 < th dose dependent rect. 21 23
150 22.49 temperature 30 10 < th dose dependent rect. 13 23
204 22.65 temperature 25 30 < th dose dependent rect. 23 23
205 22.66 temperature 30 720 < th dose dependent rect. 5 19
214 22.68 temperature 25 30 < th dose dependent rect. 7 23
246 22.76 temperature 10 1440 > th dose dependent rect. 21 2
251 22.77 temperature 30 1440 < th dose dependent rect. 21 2
255 22.77 temperature 10 720 > th dose dependent rect. 16 20
294 22.84 temperature 20 1440 > th dose dependent rect. 17 8
296 22.84 temperature 20 1440 > th dose dependent rect. 16 11
343 22.90 temperature 20 90 > th dose independent rect. 8 21
369 22.93 temperature 20 1440 > th dose dependent sin 13 NA
541 23.07 temperature 30 1440 < th dose dependent sin 13 NA
566 23.08 temperature 30 1440 < th dose dependent rect. 16 20
609 23.11 temperature 15 270 > th dose dependent sin 10 NA
617 23.11 humidity 90 14400 > th dose dependent rect. 19 8
631 23.12 humidity 90 14400 > th dose dependent rect. 21 5
684 23.15 temperature 30 270 < th dose dependent sin 10 NA
710 23.16 humidity 90 14400 > th dose dependent rect. 17 11
712 23.16 humidity 90 14400 > th dose dependent rect. 16 13
853 23.23 humidity 90 14400 > th dose dependent sin 13 NA
891 23.24 temperature 30 1440 < th dose dependent rect. 8 21