BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0115400 Os03g0115400|AK103356
(746 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0115400 WD40-like domain containing protein 1248 0.0
Os04g0568400 Quinoprotein amine dehydrogenase, beta chain-l... 495 e-140
Os04g0417800 WD40-like domain containing protein 308 9e-84
Os04g0678300 WD40-like domain containing protein 293 3e-79
Os11g0187000 WD40-like domain containing protein 271 1e-72
Os02g0539900 WD40-like domain containing protein 243 3e-64
Os02g0638900 WD40-like domain containing protein 217 3e-56
Os12g0178633 Quinonprotein alcohol dehydrogenase-like domai... 201 2e-51
Os04g0529400 WD40-like domain containing protein 137 2e-32
Os03g0725400 Similar to WD-repeat protein 5 (BMP2-induced 3... 73 6e-13
Os07g0572000 WD40-like domain containing protein 67 6e-11
>Os03g0115400 WD40-like domain containing protein
Length = 746
Score = 1248 bits (3230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/746 (83%), Positives = 621/746 (83%)
Query: 1 MSVMARPRXXXXXXXXXXXSREVMXXXXXXXXXXXGRYDGPMLEVWATDPCSVHERRQRF 60
MSVMARPR SREVM GRYDGPMLEVWATDPCSVHERRQRF
Sbjct: 1 MSVMARPRFEEDDEDEFFDSREVMSPASVSSPASSGRYDGPMLEVWATDPCSVHERRQRF 60
Query: 61 IKXXXXXXXXXXXXXXXXRPDEEPCSRSSAAEEILPCSPTVELVSAVPSFACRXXXXXXX 120
IK RPDEEPCSRSSAAEEILPCSPTVELVSAVPSFACR
Sbjct: 61 IKSLGLSDSSPSAGGGGDRPDEEPCSRSSAAEEILPCSPTVELVSAVPSFACRGEEPGAS 120
Query: 121 XXXXXXXVLDCVFKNLDDGTVFVVDEMGKDGSFRSLRDRRSNRTVTAAEFERTYGSSPFI 180
VLDCVFKNLDDGTVFVVDEMGKDGSFRSLRDRRSNRTVTAAEFERTYGSSPFI
Sbjct: 121 GGGGGAEVLDCVFKNLDDGTVFVVDEMGKDGSFRSLRDRRSNRTVTAAEFERTYGSSPFI 180
Query: 181 CELMRRVDDSDESSAVEKALVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
CELMRRVDDSDESSAVEKALV
Sbjct: 181 CELMRRVDDSDESSAVEKALVRGRRRRRRFGWLRRLGIRGCVVDVEEDDETNSTSSSSCR 240
Query: 241 XXXGKVDRVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLATXXXXXXXXX 300
GKVDRVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLAT
Sbjct: 241 SCSGKVDRVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLATGGEDGVVRV 300
Query: 301 XXXXXXXXPNELDFAEDDPSCVFFTVNENSELAPVNSSEGSKSKHYKNSKVSTDPACVVI 360
PNELDFAEDDPSCVFFTVNENSELAPVNSSEGSKSKHYKNSKVSTDPACVVI
Sbjct: 301 WRVVEGERPNELDFAEDDPSCVFFTVNENSELAPVNSSEGSKSKHYKNSKVSTDPACVVI 360
Query: 361 PHRTFALSQEPVHEFYGHDDAILDLSWSKNRDLLSSSMDKTVRLWQVGCNSCLKVFSHTN 420
PHRTFALSQEPVHEFYGHDDAILDLSWSKNRDLLSSSMDKTVRLWQVGCNSCLKVFSHTN
Sbjct: 361 PHRTFALSQEPVHEFYGHDDAILDLSWSKNRDLLSSSMDKTVRLWQVGCNSCLKVFSHTN 420
Query: 421 YVTCVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPDGKAAVVGT 480
YVTCVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPDGKAAVVGT
Sbjct: 421 YVTCVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPDGKAAVVGT 480
Query: 481 ITGNCRHYDASENHLELESQVALNGRKKSPLKRIIGFQYCPSDPKKLMVTSGDSQVRILD 540
ITGNCRHYDASENHLELESQVALNGRKKSPLKRIIGFQYCPSDPKKLMVTSGDSQVRILD
Sbjct: 481 ITGNCRHYDASENHLELESQVALNGRKKSPLKRIIGFQYCPSDPKKLMVTSGDSQVRILD 540
Query: 541 GLHVISNYKGLRSSSQVAASFTPXXXXXXXXXXXXXXYMWNYANQIAPVTNHVKTVWSNE 600
GLHVISNYKGLRSSSQVAASFTP YMWNYANQIAPVTNHVKTVWSNE
Sbjct: 541 GLHVISNYKGLRSSSQVAASFTPDGDHIISASDDSSIYMWNYANQIAPVTNHVKTVWSNE 600
Query: 601 HFSCHDVAIAIPWNASQTRNSISLACSITSSQQEVLDEFHNEHDSSSCSHTEDSPDGDSL 660
HFSCHDVAIAIPWNASQTRNSISLACSITSSQQEVLDEFHNEHDSSSCSHTEDSPDGDSL
Sbjct: 601 HFSCHDVAIAIPWNASQTRNSISLACSITSSQQEVLDEFHNEHDSSSCSHTEDSPDGDSL 660
Query: 661 YQLPSGNFTLSSAFFAESAPRGSATWPEEQLPSNSTTQSTLRKSQYKFLKASCQNAATHA 720
YQLPSGNFTLSSAFFAESAPRGSATWPEEQLPSNSTTQSTLRKSQYKFLKASCQNAATHA
Sbjct: 661 YQLPSGNFTLSSAFFAESAPRGSATWPEEQLPSNSTTQSTLRKSQYKFLKASCQNAATHA 720
Query: 721 WGQVIVAAGWDGYIRSFQNYGLPVQV 746
WGQVIVAAGWDGYIRSFQNYGLPVQV
Sbjct: 721 WGQVIVAAGWDGYIRSFQNYGLPVQV 746
>Os04g0568400 Quinoprotein amine dehydrogenase, beta chain-like domain containing
protein
Length = 698
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/504 (49%), Positives = 328/504 (65%), Gaps = 11/504 (2%)
Query: 244 GKVDRVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLATXXXXXXXXXXXX 303
G+ +R+KV Y+KRSKELSAVY+GQ IKAH+GAI+TMKFS DGQ LAT
Sbjct: 201 GRYERIKVHSYRKRSKELSAVYQGQVIKAHDGAILTMKFSPDGQLLATGGEDGVVRVWAV 260
Query: 304 XXXXXPNELDFAEDDPSCVFFTVNENSELAPVNSSEGSKSKHYKNSKVSTDPACVVIPHR 363
+ DDPSCV+ LAPVN+ KSK N +D AC+V+P
Sbjct: 261 MQS---EDCKIPLDDPSCVYLKARRKYGLAPVNAESEKKSKI--NGLKKSDSACIVVPTM 315
Query: 364 TFALSQEPVHEFYGHDDAILDLSWSKNRDLLSSSMDKTVRLWQVGCNSCLKVFSHTNYVT 423
F +S+EPVHEF GH +LDLSWS ++ LLS+S DKTVR+W++G +C++V+ H+N+VT
Sbjct: 316 VFQISEEPVHEFRGHSGDVLDLSWSSDKHLLSASTDKTVRMWEIGYANCIRVYPHSNFVT 375
Query: 424 CVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPDGKAAVVGTITG 483
CVQF+ +N FISG IDG +R+WD+ R VVDW D ++I+TAVCYRP GK VVGTITG
Sbjct: 376 CVQFNLADENLFISGSIDGKIRVWDITRSSVVDWVDIRDIVTAVCYRPGGKGVVVGTITG 435
Query: 484 NCRHYDASENHLELESQVALNGRKKSPLKRIIGFQYCPSDPKKLMVTSGDSQVRILDGLH 543
NCR Y+ S+N L+LE+Q+ALNG+KKS LKRI GFQ+CPS+P KLMVTS DS++RILDG +
Sbjct: 436 NCRFYEISDNLLKLETQIALNGKKKSSLKRITGFQFCPSNPSKLMVTSADSKIRILDGTN 495
Query: 544 VISNYKGLRSSS-QVAASFTPXXXXXXXXXXXXXXYMWNYANQIAPVTNHVKTVWSNEHF 602
VI NY GLRS S Q++A+FTP Y+W++ NQ KT ++EHF
Sbjct: 496 VIQNYSGLRSGSCQLSATFTPEGQHIISASEDSNVYVWSHENQYECACKQAKTTQTSEHF 555
Query: 603 SCHDVAIAIPWNASQTRNSISLACSITSSQQEVLDEFHN--EHDSSSCSHTEDSPDGDSL 660
++ AIAIPWN ++ R+ + L+ I Q + +++SS C S
Sbjct: 556 RSNNAAIAIPWNGTKPRSPVPLSSQILPPQGDTFWSMSKAIKYNSSLCGKDSSIKKIVST 615
Query: 661 YQLPSGNFTLSSAFFAESAPRGSATWPEEQLPSNSTTQSTLRKSQYKFLKASCQNAATHA 720
P G F L+ FF ES+ + SATWPEE LPS +T L +SQ+K L+ +C +++
Sbjct: 616 PAAP-GIFNLNQEFFIESSCKSSATWPEEMLPS-TTASVNLDESQFKLLR-NCFQGTSNS 672
Query: 721 WGQVIVAAGWDGYIRSFQNYGLPV 744
WGQVIV AGWDG IR FQN+GLPV
Sbjct: 673 WGQVIVTAGWDGRIRYFQNFGLPV 696
>Os04g0417800 WD40-like domain containing protein
Length = 680
Score = 308 bits (789), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 225/713 (31%), Positives = 329/713 (46%), Gaps = 88/713 (12%)
Query: 44 EVWATDPCSVHERRQRFIKXXXXXXXXXXXXXXXXRPDEEPCSR---SSAAEEILPCSPT 100
++W +P SV ERRQRF+K DE +R S EI P
Sbjct: 46 DIWGNEPMSVEERRQRFLKGMGF--------------DEFLATRVDFSQPQGEITTVGPF 91
Query: 101 VELVSAVPSFACRXXXXXXXXXXXXXXVLDCVFKNLDDGTVFVVDEMGKDGSFRSLRDRR 160
+L + + C ++D G + V G L+D
Sbjct: 92 ADLGLEESTTSDISSVNSSVPENESVSDASCCIGDIDSGERYTVQNDGYGELTSMLKDVA 151
Query: 161 SNRTVTAAEFERTYGSSPFICELMRRVDDSDESSAVEKALVXXXXXXXXXXXXXXXXXXX 220
S++ V+ EF+ G S + +L+R+V SS EK V
Sbjct: 152 SHKVVSLLEFDGVPGLSQSVQKLLRKVY---SSSMEEKKNVFNKKKGVKSLWKSFMKNRS 208
Query: 221 XXXXXXXXXXXXXXXXXXXXXXXGKVDRVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTM 280
G R KV+H KK++ E SAV+ GQ+I+AH+G I M
Sbjct: 209 FGGICKHDVNVKNCTI-------GIPSRTKVQHRKKKTMEFSAVHLGQEIQAHKGLIKVM 261
Query: 281 KFSSDGQYLATXXXXXXXXXXXXXXXXXPNELDFAEDDPSCVFFTVNENSELAPVNSSEG 340
KFS G YLAT ++L D+P N + ++ + + G
Sbjct: 262 KFSPSGWYLATGGEDCIVRIWQIMEVEASSKL-HGGDNPQ------NYDDKITIIKTELG 314
Query: 341 SKSKHYKNSKVSTDPACVVIPHRTFALSQEPVHEFYGHDDAILDLSWSKNRDLLSSSMDK 400
H A V+P + F +S+ P+HEF GH D ILD++WS++ LL+SS DK
Sbjct: 315 RGKNH----------ALAVVPKKGFRISETPLHEFQGHTDDILDMAWSESDYLLTSSKDK 364
Query: 401 TVRLWQVGCNSCLKVFSHTNYVTCVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADT 460
VRLW+VGC+ CL +F H +YVTCVQF+P + YFISG IDG VR+WD +VVDW DT
Sbjct: 365 MVRLWKVGCDGCLGLFKHKDYVTCVQFNPIDERYFISGSIDGKVRVWDALDKRVVDWTDT 424
Query: 461 KEIITAVCYRPDGKAAVVGTITGNCRHYDASENHLELESQVALNGRKKSPLKRIIGFQYC 520
++IITA+ Y+PDGK +VGT +G CR YD S +++L+ ++ + G KKS + R+ Q
Sbjct: 425 RKIITALSYQPDGKGFIVGTTSGECRFYDQSGENIQLDKELFMQG-KKSAVHRVNSLQSR 483
Query: 521 PSDPKKLMVTSGDSQVRILDGLHVISNYKG---LRSSSQVAASFTPXXXXXXXXXXXXXX 577
SD ++ +TS S++R+ DG+ +I ++G L++ S + S T
Sbjct: 484 SSDSSRITITSTGSKIRVADGVDIIQKFEGPWNLKALS--SPSLTSDGRYLISAGLDSNV 541
Query: 578 YMWNYANQIAPVTNH---VKTVWSNEHFSCHDVAIAIPW-NASQTRNSISLACSITSSQQ 633
Y+WN+ I V +H K+V S E F DV A+PW Q R + + S+T ++
Sbjct: 542 YIWNF--DIPSVADHKGEAKSVRSCEKFFSKDVTTAVPWPGLHQERQQVKNSSSLT--EE 597
Query: 634 EVLDEFHNEHDSSSCSHTEDSPDGDSLYQLPSGNFTLSSAFFAESAPRGSATWPEEQLPS 693
V + H SP ++ FA+ +G+ TWPEE+LP
Sbjct: 598 SVSSPILHRHGE------RRSP---------------AARCFADGM-KGTPTWPEEKLPP 635
Query: 694 NSTTQSTLRKSQYKFLKASCQNAATHAWGQVIVAAGWDGYIRSFQNYGLPVQV 746
+ + C + + AW VIV A DG IRSF NYGLPV++
Sbjct: 636 AKAADAPRL--------SDCLSTISPAWNTVIVTASRDGVIRSFHNYGLPVRL 680
>Os04g0678300 WD40-like domain containing protein
Length = 819
Score = 293 bits (751), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 273/520 (52%), Gaps = 29/520 (5%)
Query: 248 RVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLATXXXXXXXXXXXXXXXX 307
RV+VR Y K KEL+ ++ Q++ AH G+I + FS DG+YLA+
Sbjct: 308 RVRVRQYGKACKELTGLFMTQELAAHSGSIWCINFSLDGRYLASAGEDRVIHVWEVSEGE 367
Query: 308 XPNELDFA-----EDDPSCVFFTV---NENSELAPVNSS-------EGSKSKHYKNSKVS 352
EL E+ C F N + ELA ++ S E + ++S+ S
Sbjct: 368 RKGELLGEGTVARENGGGCSPFLAAVGNGSPELATLSLSCADGGFVEKKRRPRMQSSRKS 427
Query: 353 TDPACVVIPHRTFALSQEPVHEFYGHDDAILDLSWSKNRDLLSSSMDKTVRLWQVGCNSC 412
+V+P F +PV GH +LDLSWSK++ LLSSSMDKTV+LW + ++C
Sbjct: 428 VGSDHLVVPECVFGFRDKPVCSLLGHAADVLDLSWSKSQYLLSSSMDKTVKLWDITTSTC 487
Query: 413 LKVFSHTNYVTCVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPD 472
LK FSHT+YVTC+QF+P DN+FISG +D VRIW+V ++ DW D E++TA CY PD
Sbjct: 488 LKTFSHTDYVTCIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEMVTAACYSPD 547
Query: 473 GKAAVVGTITGNCRHYDASENHLELESQVALNGR-KKSPLKRIIGFQYCPSDPKKLMVTS 531
G+ A+VG+ G+C +D +E L+ +SQ+ L R KKS K+I GFQ+ P ++++TS
Sbjct: 548 GQVALVGSHKGSCHLFDTTEKKLQYKSQIELRIRKKKSGQKKITGFQFAPGSSSEVLITS 607
Query: 532 GDSQVRILDGLHVISNYKGLR-SSSQVAASFTPXXXXXXXXXXXXXXYMWNYANQIAPVT 590
DS++R+++G ++ +KG R +SSQ++AS P Y+W + N P
Sbjct: 608 ADSRIRVVNGDELVHKFKGFRNTSSQISASVAPNGKYVVCASEDSHVYVWRHDNTSHPSR 667
Query: 591 NH--VKTVWSNEHFSCHDVAIAIPWNASQTRNSISLACSITSSQQEVLDEFHNEHDSSSC 648
+ V S EHF CHDV +AI W +++R S S S + + N +
Sbjct: 668 SRSAVDVTNSYEHFHCHDVTVAITWPGAESRGSFGSRSSRNSDSDDAV---MNTGRDAPV 724
Query: 649 SHTEDSPDG--DSLYQLPSGNFTLSSAFFAESAPRGSATWPEEQLPSNSTTQSTLRKSQY 706
++E +G + + P S++ A S +WP+E+ S+ +S+
Sbjct: 725 ENSEHDLNGTVNRCTKRPVCEGVASTS--NPPADGVSTSWPDEK---QSSAKSSPGHCSS 779
Query: 707 KFLKASCQNAATHAWGQVIVAAGWDGYIRSFQNYGLPVQV 746
+ AWG VIV AG G IR FQN+G PVQV
Sbjct: 780 DLCIGALDVQRRSAWGLVIVTAGRGGEIRVFQNFGFPVQV 819
>Os11g0187000 WD40-like domain containing protein
Length = 1391
Score = 271 bits (694), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 264/524 (50%), Gaps = 56/524 (10%)
Query: 246 VDRVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLATXXXXXXXXXXXXXX 305
++R KV + K ++EL+ +Y Q+++AHEG+I ++KFS DG++LA+
Sbjct: 398 LERPKVHSFGKTARELTGMYFRQEVRAHEGSIWSIKFSPDGRFLASGGEDRVVHVWHVVD 457
Query: 306 XXXPNELDFAEDDPSCVFFTVNENSELAPVNSSEGS-----------KSKHYKNSKVSTD 354
P PS + + +S+ P + G +++ +K K
Sbjct: 458 DGAP---------PSSMSPELLSSSQSLPPLAPHGDGGLAAQLSRKLRARRWKTCK-DVL 507
Query: 355 PACVVIPHRTFALSQEPVHEFYGHDDAILDLSWSK-NRDLLSSSMDKTVRLWQVGCNSCL 413
P VV+P FAL+ EP GH D +LDL+WS ++ LLSSSMDKTVRLW +CL
Sbjct: 508 PEHVVVPETAFALADEPACSLEGHLDDVLDLAWSMYSQLLLSSSMDKTVRLWDTEAKACL 567
Query: 414 KVFSHTNYVTCVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPDG 473
K+F H +YVTCVQF+P D YFISG +D VRIW V QVVDW+D +++TA CY PDG
Sbjct: 568 KLFPHNDYVTCVQFNPVDDGYFISGSLDSKVRIWSVAERQVVDWSDLDDMVTAACYTPDG 627
Query: 474 KAAVVGTITGNCRHYDASENHLELESQVALN--GRKKSPLKRIIGFQYCPSDPKKLMVTS 531
+AA+VG+ G+CR Y ++ L E+Q+ +N ++KS K+I GFQ+ P +P +++VT+
Sbjct: 628 QAAIVGSHKGSCRFYKTADCKLNQEAQIDMNISKKRKSHAKKITGFQFAPGNPSEILVTT 687
Query: 532 GDSQVRILDGLHVISNYKGLR-SSSQVAASFTPXXXXXXXXXXXXXXYMWNYANQIAPVT 590
DSQ+R+ +G+ V+ +KG + +SSQ++AS++ Y+W A
Sbjct: 688 ADSQIRVFNGITVLQKFKGFKNTSSQISASYSGDGRYVVCSSEDSNVYVWRRATSPGGAA 747
Query: 591 NHV--------KTVWSNEHFSCHDVAIAIPWNASQTRNSISLACSITSSQQEVLDEFHNE 642
+T + E F C DV+ A+PW L+ + ++ +E
Sbjct: 748 GGGVAVKAKTWRTSRAYECFFCKDVSAAVPW---------PLSPCLPPTRGGGGGGDDDE 798
Query: 643 HDSSSCSHTEDSPDGDSLYQLPSGNFTLSSAFFAESAPRGSATWPEEQLPSNSTTQSTLR 702
SSS D +SA + + GS + P + + L
Sbjct: 799 RASSSVRGAVVGGD--------------ASASRSPARQLGSLPLRPKSGPMTYSGEKQLG 844
Query: 703 KSQYKFLKASCQNAATHAWGQVIVAAGWDGYIRSFQNYGLPVQV 746
+ + +AWG V+V A G IR +QN+G+P+ +
Sbjct: 845 VPREPSSRWHGGAEGGNAWGMVVVTASLAGEIRVYQNFGMPLSL 888
>Os02g0539900 WD40-like domain containing protein
Length = 672
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 229/509 (44%), Gaps = 73/509 (14%)
Query: 244 GKVDRVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLATXXXXXXXXXXXX 303
G + R KV K+ + +AVY Q+I+AHEG I MKFSS G +LA+
Sbjct: 231 GTLYRTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMKFSSSGWHLAS------------ 278
Query: 304 XXXXXPNELDFAEDDPSCVFFTVNENSELAPVNSSEGSKSKHYKNSKVSTDPACVVIPHR 363
+D + + E E +P K V P +IP +
Sbjct: 279 -----------GGEDCVVRVWQITE-VESSPDLYGRDVPEDMNKKKDVKIKP-LAIIPKK 325
Query: 364 TFALSQEPVHEFYGHDDAILDLSWSKNRDLLSSSMDKTVRLWQVGCNSCLKVFSHTNYVT 423
F++++ P+HEF GH +LDL+WSK+ LLSSS D T+R+W+VGC CL VF H +YVT
Sbjct: 326 VFSITETPLHEFQGHTSDVLDLAWSKSDFLLSSSKDTTIRMWKVGCYDCLAVFRHGDYVT 385
Query: 424 CVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPDGKAAVVGTITG 483
CVQF+P + YFISG IDG VR+WDV +VVDW DTK IITA+ +RPDGK VVG++ G
Sbjct: 386 CVQFNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYIITAISHRPDGKGFVVGSVKG 445
Query: 484 NCRHYDASENHLELESQVALN-----GRKKSPLKRIIGFQYCPSDPKKLMVTSGDSQVRI 538
CR YD S L + N R++ +I Q+ P ++++TS D ++R+
Sbjct: 446 RCRFYDQS-GLFPLGRNIERNKLMRIKRRRCAANKITNIQFSQGHPSRMIITSKDHKIRV 504
Query: 539 LDGLHVISNYKG-LRSSSQVAASFTPXXXXXXXXXXXXXXYMWNYANQIAPVTNHVKTVW 597
+G + ++G RS V S TP +WN+
Sbjct: 505 SEGHKITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKIRIWNFDGGGRRRRVVSSR-- 562
Query: 598 SNEHFSCHDVAIAIPWNASQTRNSISLACSITSSQQEVLDEFHNEHDSSSCSHTEDSPDG 657
E F V PW + +D CS
Sbjct: 563 --ELFFSEGVTAVAPWARAMGGGGGGADAPTLC------------YDRERCSF------- 601
Query: 658 DSLYQLPSGNFTLSSAFFAESAPRGSATWPEEQLPSNSTTQSTLRKSQYKFLKASCQNAA 717
+ + +P G + + TWPEE+L +LR + C++
Sbjct: 602 GTWFVVPDGAAAAA-----------ATTWPEERL------LPSLRYVNCAGMD-DCRSQV 643
Query: 718 THAWGQVIVAAGWDGYIRSFQNYGLPVQV 746
AW V+V G IR+F NYGLPV++
Sbjct: 644 PAAWNMVVVTGSRGGAIRAFHNYGLPVRL 672
>Os02g0638900 WD40-like domain containing protein
Length = 479
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/248 (46%), Positives = 154/248 (62%), Gaps = 8/248 (3%)
Query: 247 DRVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLATXXXXXXXXXXXXXXX 306
DRVKVR Y K KELS ++ QDIKAH G+I ++KFS DG +LA+
Sbjct: 216 DRVKVRQYGKSYKELSGLFMNQDIKAHSGSIWSIKFSPDGHFLASAGEDCVIHVWEVLEW 275
Query: 307 XXPNELDFAED---DPSCVFFTVNENSELAPVNSSEGSKSKHYKNSKVSTDPACVVIPHR 363
E E+ DP + V+ SE + +K+ H + S VS+D +++P
Sbjct: 276 KMIEEKGLEENGVFDPESML--VSTASEGSHREKKLRAKAVHNQRS-VSSDR--LMVPEH 330
Query: 364 TFALSQEPVHEFYGHDDAILDLSWSKNRDLLSSSMDKTVRLWQVGCNSCLKVFSHTNYVT 423
FALS++PV F GH + +LDLSWSK++ LLSSSMDKTVRLW V CLK FSH++YVT
Sbjct: 331 VFALSEKPVITFAGHSEDVLDLSWSKSQYLLSSSMDKTVRLWHVSSTYCLKTFSHSDYVT 390
Query: 424 CVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPDGKAAVVGTITG 483
C+QF+P +D YFISG +D VRIW ++ ++VDW D E+ITA CY PDG+ A+VG+ G
Sbjct: 391 CIQFNPVNDKYFISGSLDKKVRIWSIQERKIVDWIDLHEMITAACYTPDGQGALVGSHKG 450
Query: 484 NCRHYDAS 491
C YD S
Sbjct: 451 KCHVYDIS 458
>Os12g0178633 Quinonprotein alcohol dehydrogenase-like domain containing protein
Length = 627
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 188/392 (47%), Gaps = 65/392 (16%)
Query: 246 VDRVKVRHYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLATXXXXXXXXXXXXXX 305
+R+KV K KEL+ +Y Q+I AHEG+I ++KFS+DG++LA+
Sbjct: 173 TERLKVHQSGKSCKELTGLYMCQEIMAHEGSIWSIKFSTDGRWLASAGEDHVVRIWQVVE 232
Query: 306 XXXPNELDFAEDDPSCVFFTV--------NENSELAPVNSSEGSKSKHYKNSKVSTDPAC 357
P L D S +S P S KS K+ + T P
Sbjct: 233 ANSPACL--PNDGHSGPLPPHPPGAAPADGTSSSSTPALSQLSKKSVKGKSGR-DTLPEH 289
Query: 358 VVIPHRTFALSQEPVHEFYGHDDAILDLSWSKNRDLLSSSMDKTVRLWQVGCNSCLKVFS 417
+V+P + FAL+ +P GH D +LDL+WSK LLSSSMDKTVRLW +CLKVF+
Sbjct: 290 LVVPDKVFALADQPACVLEGHQDDVLDLTWSKTDQLLSSSMDKTVRLWDTTTKACLKVFA 349
Query: 418 HTNYVTCVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPDGKAAV 477
H +YVTC+QF+P D +FISG +D VR+W + QVVDW D E++TA Y PDG+ A+
Sbjct: 350 HNDYVTCIQFNPADDRFFISGSLDAKVRLWSIPDRQVVDWTDLNEMVTAASYTPDGQGAI 409
Query: 478 VGTITGNCRHY---DASENHLELESQVALNGRKKSPLKRIIGFQYCPSDPKKLMVTSGDS 534
+G+ G+CR Y ++ H + E+QVA G + R+ GF+
Sbjct: 410 IGSHKGSCRFYKTTGGADRHRDEEAQVA--GEED---HRLPGFK---------------- 448
Query: 535 QVRILDGLHVISNYKGLRSSSQVAASFTPXXXXXXXXXXXXXXYMWNYA----------N 584
+SSQ++A++T Y+W A
Sbjct: 449 -----------------NTSSQISAAYTSDGRYVVCPSEDSHVYLWRAARGAPPAAAAIG 491
Query: 585 QIAPVTNHVK---TVWSNEHFSCHDVAIAIPW 613
I + K T+ S E+F C DV+ A+PW
Sbjct: 492 SIGGIGMKPKTWCTIRSFENFYCKDVSAAVPW 523
>Os04g0529400 WD40-like domain containing protein
Length = 150
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 91/132 (68%), Gaps = 1/132 (0%)
Query: 422 VTCVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADTKEIITAVCYRPDGKAAVVGTI 481
VTC+QF+P D YFISG +D VRIW + ++VDW D E++TA CY PDG+ A+VG+
Sbjct: 3 VTCIQFNPVDDRYFISGSLDEKVRIWSIPGREIVDWNDLHEMVTAACYTPDGQRALVGSH 62
Query: 482 TGNCRHYDASENHLELESQVAL-NGRKKSPLKRIIGFQYCPSDPKKLMVTSGDSQVRILD 540
G+C YD S+N L + Q+ L N ++KS K+I GFQ+ P K+++TS DS++R++D
Sbjct: 63 KGSCHIYDTSDNKLLQKKQIDLQNKKRKSNQKKITGFQFLPGSSSKVLITSADSRIRVVD 122
Query: 541 GLHVISNYKGLR 552
G ++ +KG++
Sbjct: 123 GFELVHKFKGIK 134
>Os03g0725400 Similar to WD-repeat protein 5 (BMP2-induced 3-kb gene protein)
(WD-repeat protein BIG-3)
Length = 324
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 73/137 (53%), Gaps = 15/137 (10%)
Query: 371 PVHEFYGHDDAILDLSWSKNRDLLSS-SMDKTVRLWQVGCNS---------CLKVFS-HT 419
PV E GH + + DL++S + L++S S D+TVR+W +G +K S HT
Sbjct: 54 PVAELAGHGEGVSDLAFSPDGRLIASASDDRTVRIWDLGDGGGGGGGGEPRLMKTLSGHT 113
Query: 420 NYVTCVQFHPTSDNYFISGCIDGLVRIWDVR--RCQVVDWADTKEIITAVCYRPDGKAAV 477
NY C+ F P N SG D VR+W+VR RC V A + E +T+V + DG V
Sbjct: 114 NYAFCLAFSPHG-NMLASGSFDETVRVWEVRSGRCLRVLPAHS-EPVTSVDFNRDGAMIV 171
Query: 478 VGTITGNCRHYDASENH 494
G+ G CR +D++ H
Sbjct: 172 SGSYDGLCRIWDSATGH 188
>Os07g0572000 WD40-like domain containing protein
Length = 338
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 26/149 (17%)
Query: 368 SQEPVHEFYGHDDAILDLSWSKNRDLL-SSSMDKTVRLWQV-----GCNS---------- 411
S + GH D + D+SWS + L S+S D+T+R+W V G N
Sbjct: 56 SLAAIATLRGHADGVSDISWSTDSFYLCSASDDRTLRIWDVRPVLAGLNPGSGGGGGGAQ 115
Query: 412 --------CLKVF-SHTNYVTCVQFHPTSDNYFISGCIDGLVRIWDVRRCQVVDWADT-K 461
C++V HTN+V F+P +++ SG D VRIWDV+ + V D
Sbjct: 116 PADPNADRCIRVLKGHTNFVFSANFNPQTNSTVASGGFDCTVRIWDVKSGRCVRAIDAHS 175
Query: 462 EIITAVCYRPDGKAAVVGTITGNCRHYDA 490
E +T+V + DG V G+ G C+ +DA
Sbjct: 176 EPVTSVHFIRDGSIIVSGSHDGTCKIWDA 204
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.130 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,451,542
Number of extensions: 790112
Number of successful extensions: 2555
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 2543
Number of HSP's successfully gapped: 13
Length of query: 746
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 638
Effective length of database: 11,396,689
Effective search space: 7271087582
Effective search space used: 7271087582
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)