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Os04g0678300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : WD40-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.81 (0.051) R2 : 0.784
β1 : -2.77 (0.341) R2dD : 0.224 R2D : 0.472
β2 : 1.13 (0.0881) R2dC : 0.0829 R2C : 0.098
β3 : -0.64 (0.157) R2dE : 0.0196 R2E : 0.0221
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -7.95 (1.14) R2dD*E : 0.168 R2D*E : 0.479
γ1 : -0.126 (0.111) R2dN8 : 0.00179 R2N8 : -0.00652
σ : 0.662
deviance : 202.31
__
_____
C
peak time of C : 22.1
E
wheather : temperature
threshold : 28.67
memory length : 2480
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
185.48 0.64 6.83 -2.9 1.15 -0.67 2.09 -6.97 -0.172 22.2 28.6 2539 -- --
232.05 0.709 6.92 -3.83 1.47 -0.993 2.71 -- -0.0386 21.4 30.2 5636 -- --
202.31 0.662 6.81 -2.77 1.13 -0.64 -- -7.95 -0.126 22.1 28.67 2480 -- --
221.36 0.693 6.98 -4.8 1.21 -1.56 -- -- -0.222 22.3 32.6 4699 -- --
270.89 0.767 6.84 -3.16 -- -1.2 -- -7.22 -0.264 -- 28.4 2310 -- --
279.98 0.784 7.02 -4.4 1.3 -- 2.53 -- -0.487 22.6 -- -- -- --
306.22 0.819 7.03 -4.5 1.29 -- -- -- -0.493 22.4 -- -- -- --
302.9 0.811 6.93 -4.9 -- -1.62 -- -- -0.191 -- 32.5 5170 -- --
819.43 1.33 6.87 -- 1.19 -0.673 -- -- 0.155 22.1 33.3 2786 -- --
408.79 0.945 6.99 -4.47 -- -- -- -- -0.488 -- -- -- -- --
838.92 1.35 6.92 -- 1.27 -- -- -- 0.00819 22.2 -- -- -- --
905.6 1.4 6.86 -- -- -0.919 -- -- 0.147 -- 32.2 2430 -- --
936.82 1.43 6.88 -- -- -- -- -- 0.00857 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 173.28 radiation 10 14400 < th dose independent rect. 16 14
2 174.54 radiation 10 14400 < th dose independent rect. 17 1
5 175.23 radiation 10 14400 < th dose independent rect. 16 10
7 175.24 radiation 10 14400 < th dose independent rect. 16 6
11 175.25 radiation 10 14400 < th dose independent rect. 16 3
16 176.72 radiation 10 14400 > th dose dependent rect. 17 1
53 178.33 humidity 50 14400 < th dose dependent rect. 16 1
56 178.83 radiation 10 14400 < th dose dependent rect. 16 13
57 178.93 radiation 10 14400 < th dose dependent rect. 16 7
62 178.95 radiation 10 14400 < th dose dependent rect. 16 3
65 178.96 radiation 10 14400 < th dose dependent rect. 16 10
79 179.23 radiation 40 14400 < th dose dependent rect. 16 13
87 179.33 radiation 40 14400 < th dose dependent rect. 16 7
96 179.37 radiation 40 14400 < th dose dependent rect. 16 3
110 179.46 radiation 10 14400 < th dose dependent rect. 16 1
154 179.84 humidity 50 14400 < th dose dependent rect. 16 18
231 181.03 radiation 30 14400 < th dose independent rect. 7 1
233 181.22 radiation 20 14400 > th dose dependent rect. 16 15
250 181.88 radiation 30 14400 < th dose independent rect. 20 12
255 182.04 radiation 30 14400 < th dose independent rect. 1 7
271 182.21 radiation 30 14400 < th dose independent rect. 5 3
294 182.50 radiation 30 4320 > th dose dependent rect. 15 17
334 182.95 radiation 30 14400 < th dose independent rect. 15 17
352 183.19 radiation 20 1440 < th dose dependent rect. 15 15
353 183.23 radiation 10 14400 > th dose independent rect. 16 2
377 183.31 radiation 40 1440 < th dose dependent rect. 15 15
384 183.54 radiation 10 14400 < th dose dependent sin 14 NA
386 183.60 humidity 50 14400 > th dose independent rect. 17 16
393 183.92 radiation 1 1440 > th dose dependent rect. 15 15
394 183.97 radiation 40 1440 < th dose dependent rect. 15 11
397 184.00 radiation 40 1440 < th dose dependent rect. 15 9
416 184.14 radiation 40 1440 < th dose dependent rect. 15 4
422 184.26 radiation 1 1440 > th dose dependent rect. 15 4
434 184.32 radiation 20 1440 < th dose dependent rect. 15 11
436 184.37 radiation 20 1440 < th dose dependent rect. 15 9
449 184.47 radiation 20 1440 < th dose dependent rect. 15 4
452 184.50 humidity 70 14400 < th dose independent rect. 19 12
487 184.73 humidity 70 14400 < th dose independent rect. 19 3
496 184.74 radiation 1 1440 > th dose dependent rect. 16 1
498 184.79 humidity 50 14400 < th dose independent rect. 16 1
499 184.79 radiation 40 1440 < th dose dependent rect. 16 1
584 185.79 radiation 10 14400 < th dose independent sin 13 NA
634 186.14 radiation 30 14400 > th dose independent rect. 7 1
655 186.19 humidity 50 14400 < th dose independent rect. 16 18
690 186.54 radiation 1 14400 > th dose dependent rect. 4 2
751 187.06 wind 5 43200 < th dose independent rect. 7 1
761 187.48 wind 5 43200 > th dose independent rect. 6 2
765 187.57 wind 5 43200 < th dose independent rect. 19 14
768 187.59 humidity 50 14400 > th dose independent rect. 17 13
771 187.61 humidity 50 14400 > th dose independent rect. 17 11
785 187.69 wind 5 43200 > th dose independent rect. 19 15
789 187.72 temperature 25 4320 > th dose dependent rect. 18 1
804 187.80 humidity 50 14400 > th dose independent rect. 17 7
833 188.08 humidity 50 14400 > th dose independent rect. 16 1
905 188.45 radiation 30 14400 > th dose dependent rect. 7 1
962 188.72 wind 5 43200 < th dose independent rect. 6 4
986 188.87 radiation 10 1440 < th dose dependent sin 14 NA
989 188.89 wind 5 43200 > th dose independent rect. 6 4