BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0678300 Os04g0678300|AK102779
(819 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0678300 WD40-like domain containing protein 1224 0.0
Os11g0187000 WD40-like domain containing protein 410 e-114
Os02g0638900 WD40-like domain containing protein 362 e-100
Os12g0178633 Quinonprotein alcohol dehydrogenase-like domai... 309 4e-84
Os04g0568400 Quinoprotein amine dehydrogenase, beta chain-l... 294 2e-79
Os04g0417800 WD40-like domain containing protein 239 6e-63
Os02g0539900 WD40-like domain containing protein 234 2e-61
Os04g0529400 WD40-like domain containing protein 224 2e-58
Os03g0725400 Similar to WD-repeat protein 5 (BMP2-induced 3... 83 7e-16
Os07g0572000 WD40-like domain containing protein 72 2e-12
>Os04g0678300 WD40-like domain containing protein
Length = 819
Score = 1224 bits (3168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/741 (83%), Positives = 618/741 (83%)
Query: 79 LSSSATFSAYEVWISEPTSXXXXXXXXXXXXGLAHDSEPLPHXXXXXXXXXXXXXXXXXX 138
LSSSATFSAYEVWISEPTS GLAHDSEPLPH
Sbjct: 79 LSSSATFSAYEVWISEPTSVEERRRVLLRRLGLAHDSEPLPHPSPRVSSSSPRSPTPSPP 138
Query: 139 XXXXXXXXXXXXXXXXXXXSGHGKPPLARNPSGGAEQCRIRNLDDGTEFEVGEVHDEVVR 198
SGHGKPPLARNPSGGAEQCRIRNLDDGTEFEVGEVHDEVVR
Sbjct: 139 SSSPPRPAPVVAAAEEPRSSGHGKPPLARNPSGGAEQCRIRNLDDGTEFEVGEVHDEVVR 198
Query: 199 EVGTGRQLTFEEFELCIGRSPIVQELMRRXXXXXXXXXXXXXXXXXKPRRKPGGWLRGIR 258
EVGTGRQLTFEEFELCIGRSPIVQELMRR KPRRKPGGWLRGIR
Sbjct: 199 EVGTGRQLTFEEFELCIGRSPIVQELMRRATTAASSSTSDHAAPASKPRRKPGGWLRGIR 258
Query: 259 HLAGSVAYGRSSTXXXXXXXXXXXXXXXARRLSSATDDSLDGNGSRNAGRVRVRQYGKAC 318
HLAGSVAYGRSST ARRLSSATDDSLDGNGSRNAGRVRVRQYGKAC
Sbjct: 259 HLAGSVAYGRSSTDERDKEKEKEKKEREARRLSSATDDSLDGNGSRNAGRVRVRQYGKAC 318
Query: 319 KELTGLFMTQELAAHSGSIWCINFSLDGRYLASAGEDRVIHVWEVSXXXXXXXXXXXXTV 378
KELTGLFMTQELAAHSGSIWCINFSLDGRYLASAGEDRVIHVWEVS TV
Sbjct: 319 KELTGLFMTQELAAHSGSIWCINFSLDGRYLASAGEDRVIHVWEVSEGERKGELLGEGTV 378
Query: 379 ARENGGGCSPFLAAVGNGSPELATLSLSCADGGFVEKKRRPRMQSSRKSVGSDHLVVPEC 438
ARENGGGCSPFLAAVGNGSPELATLSLSCADGGFVEKKRRPRMQSSRKSVGSDHLVVPEC
Sbjct: 379 ARENGGGCSPFLAAVGNGSPELATLSLSCADGGFVEKKRRPRMQSSRKSVGSDHLVVPEC 438
Query: 439 VFGFRDKPVCSLLGHAADVLDXXXXXXXXXXXXXMDKTVKLWDITTSTCLKTFSHTDYVT 498
VFGFRDKPVCSLLGHAADVLD MDKTVKLWDITTSTCLKTFSHTDYVT
Sbjct: 439 VFGFRDKPVCSLLGHAADVLDLSWSKSQYLLSSSMDKTVKLWDITTSTCLKTFSHTDYVT 498
Query: 499 CIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEMVTAACYSPDGQVALVGSHKG 558
CIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEMVTAACYSPDGQVALVGSHKG
Sbjct: 499 CIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEMVTAACYSPDGQVALVGSHKG 558
Query: 559 SCHLFDTTEKKLQYKSQIELRIRKKKSGQKKITGFQFAPGSSSEVLITSADSRIRVVNGD 618
SCHLFDTTEKKLQYKSQIELRIRKKKSGQKKITGFQFAPGSSSEVLITSADSRIRVVNGD
Sbjct: 559 SCHLFDTTEKKLQYKSQIELRIRKKKSGQKKITGFQFAPGSSSEVLITSADSRIRVVNGD 618
Query: 619 ELVHKFKGFRNTSSQISASVAPNGKYVVCASEDSHVYVWRHDNTSHPSRSRSAVDVTNSY 678
ELVHKFKGFRNTSSQISASVAPNGKYVVCASEDSHVYVWRHDNTSHPSRSRSAVDVTNSY
Sbjct: 619 ELVHKFKGFRNTSSQISASVAPNGKYVVCASEDSHVYVWRHDNTSHPSRSRSAVDVTNSY 678
Query: 679 EHFHCHDVTVAITWPGAEXXXXXXXXXXXXXXXXXAVMNTGRDAPVENSEHDLNGTVNRC 738
EHFHCHDVTVAITWPGAE AVMNTGRDAPVENSEHDLNGTVNRC
Sbjct: 679 EHFHCHDVTVAITWPGAESRGSFGSRSSRNSDSDDAVMNTGRDAPVENSEHDLNGTVNRC 738
Query: 739 TKRPVCEGVASTSNPPADGVSTSWPDEKQSSAKSSPGHCSSDLCIGALDVQRRSAWGLVI 798
TKRPVCEGVASTSNPPADGVSTSWPDEKQSSAKSSPGHCSSDLCIGALDVQRRSAWGLVI
Sbjct: 739 TKRPVCEGVASTSNPPADGVSTSWPDEKQSSAKSSPGHCSSDLCIGALDVQRRSAWGLVI 798
Query: 799 VTAGRGGEIRVFQNFGFPVQV 819
VTAGRGGEIRVFQNFGFPVQV
Sbjct: 799 VTAGRGGEIRVFQNFGFPVQV 819
>Os11g0187000 WD40-like domain containing protein
Length = 1391
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 266/681 (39%), Positives = 354/681 (51%), Gaps = 84/681 (12%)
Query: 178 IRNLDDGTEFEVGEVHDE-----VVREVGTGRQLTFEEFELCIGRSPIVQELMRRXXXXX 232
+R LDDG EF V + ++ TG QL+ +EFE IG +P V++LMRR
Sbjct: 253 VRKLDDGKEFVVSGQPAAGGSRGALSDLKTGVQLSLDEFERFIGYTPFVKQLMRRSQSQP 312
Query: 233 XXXXXXXXXXXXKPRRKPGGWLRGIRHLAGSVA-----YGRSSTXXXXXXXXXXXXXXXA 287
KP +K WL+ I+ +A + Y S+ A
Sbjct: 313 VAAGAANGDA--KPGKKKPRWLKNIKLVASAAGLIQEKYKESNCGGGGCGRSSSSSSSSA 370
Query: 288 RRL---------SSATDDSLDGNGSRNAGRVRVRQYGKACKELTGLFMTQELAAHSGSIW 338
+ S++T+ + + S + R +V +GK +ELTG++ QE+ AH GSIW
Sbjct: 371 EQAHQPGVTMSKSASTNAATMASSSSSLERPKVHSFGKTARELTGMYFRQEVRAHEGSIW 430
Query: 339 CINFSLDGRYLASAGEDRVIHVWEVSXXXXXXXXXXXXTVARENGGGCSPFLAAVGNGSP 398
I FS DGR+LAS GEDRV V G P + SP
Sbjct: 431 SIKFSPDGRFLASGGEDRV------------------VHVWHVVDDGAPP-----SSMSP 467
Query: 399 ELATLSLSC------ADGGF---VEKKRRPRMQSSRKSVGSDHLVVPECVFGFRDKPVCS 449
EL + S S DGG + +K R R + K V +H+VVPE F D+P CS
Sbjct: 468 ELLSSSQSLPPLAPHGDGGLAAQLSRKLRARRWKTCKDVLPEHVVVPETAFALADEPACS 527
Query: 450 LLGHAADVLDXX-XXXXXXXXXXXMDKTVKLWDITTSTCLKTFSHTDYVTCIQFNPVDDN 508
L GH DVLD MDKTV+LWD CLK F H DYVTC+QFNPVDD
Sbjct: 528 LEGHLDDVLDLAWSMYSQLLLSSSMDKTVRLWDTEAKACLKLFPHNDYVTCVQFNPVDDG 587
Query: 509 FFISGSLDEKVRIWNVHDRKIEDWNDLHEMVTAACYSPDGQVALVGSHKGSCHLFDTTEK 568
+FISGSLD KVRIW+V +R++ DW+DL +MVTAACY+PDGQ A+VGSHKGSC + T +
Sbjct: 588 YFISGSLDSKVRIWSVAERQVVDWSDLDDMVTAACYTPDGQAAIVGSHKGSCRFYKTADC 647
Query: 569 KLQYKSQIELRI-RKKKSGQKKITGFQFAPGSSSEVLITSADSRIRVVNGDELVHKFKGF 627
KL ++QI++ I +K+KS KKITGFQFAPG+ SE+L+T+ADS+IRV NG ++ KFKGF
Sbjct: 648 KLNQEAQIDMNISKKRKSHAKKITGFQFAPGNPSEILVTTADSQIRVFNGITVLQKFKGF 707
Query: 628 RNTSSQISASVAPNGKYVVCASEDSHVYVWRHDNTSHPSRSRSAVD------VTNSYEHF 681
+NTSSQISAS + +G+YVVC+SEDS+VYVWR + + + +YE F
Sbjct: 708 KNTSSQISASYSGDGRYVVCSSEDSNVYVWRRATSPGGAAGGGVAVKAKTWRTSRAYECF 767
Query: 682 HCHDVTVAITWPGAEXXXXXXXXXXXXXXXXXAVMNTGRDAPVENSEHDLNGTV---NRC 738
C DV+ A+ WP + G E + + G V +
Sbjct: 768 FCKDVSAAVPWPLSPCLPPTR-------------GGGGGGDDDERASSSVRGAVVGGDAS 814
Query: 739 TKRPVCEGVASTSNPPADGVSTSWPDEKQSSAKSSPGHCSSDLCIGALDVQRRSAWGLVI 798
R + S P G T + EKQ P SS GA + +AWG+V+
Sbjct: 815 ASRSPARQLGSLPLRPKSGPMT-YSGEKQLGVPREP---SSRWHGGA---EGGNAWGMVV 867
Query: 799 VTAGRGGEIRVFQNFGFPVQV 819
VTA GEIRV+QNFG P+ +
Sbjct: 868 VTASLAGEIRVYQNFGMPLSL 888
>Os02g0638900 WD40-like domain containing protein
Length = 479
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/407 (49%), Positives = 246/407 (60%), Gaps = 37/407 (9%)
Query: 175 QCRIRNLDDGTEFEVGEVHDEVVREVGTGRQLTFEEFELCIGRSPIVQELMRRXXXXXXX 234
+C IRNLDDG+EF V E + +REVGTGRQLT EEFEL IGRSPIVQELMRR
Sbjct: 74 RCLIRNLDDGSEFLVRE--EFGLREVGTGRQLTMEEFELFIGRSPIVQELMRRQSVVNSN 131
Query: 235 XXXXXXXXXXKP--------------RRKPGGWLRGIRHLAGS-VAYGRSSTXXXXXXXX 279
P ++ WLR +R AGS V Y R
Sbjct: 132 SNSNSQSGASTPIERSSSGSSNGGARYKRRNSWLRSLRSAAGSMVTYTRD---RRSSDEK 188
Query: 280 XXXXXXXARRLSSATDDSLDGNGSRNAGRVRVRQYGKACKELTGLFMTQELAAHSGSIWC 339
R SSATDDS DG + RV+VRQYGK+ KEL+GLFM Q++ AHSGSIW
Sbjct: 189 DTSSDKGGHRSSSATDDSQDGVANHGPDRVKVRQYGKSYKELSGLFMNQDIKAHSGSIWS 248
Query: 340 INFSLDGRYLASAGEDRVIHVWEVSXXXXXXXXXXXXTVARENGGGCSPFLAAVGNGSPE 399
I FS DG +LASAGED VIHVWEV + E G L G PE
Sbjct: 249 IKFSPDGHFLASAGEDCVIHVWEV----------LEWKMIEEKG------LEENGVFDPE 292
Query: 400 LATLSLSCADGGFVEKKRRPRMQSSRKSVGSDHLVVPECVFGFRDKPVCSLLGHAADVLD 459
+ L + ++G EKK R + +++SV SD L+VPE VF +KPV + GH+ DVLD
Sbjct: 293 -SMLVSTASEGSHREKKLRAKAVHNQRSVSSDRLMVPEHVFALSEKPVITFAGHSEDVLD 351
Query: 460 XXXXXXXXXXXXXMDKTVKLWDITTSTCLKTFSHTDYVTCIQFNPVDDNFFISGSLDEKV 519
MDKTV+LW ++++ CLKTFSH+DYVTCIQFNPV+D +FISGSLD+KV
Sbjct: 352 LSWSKSQYLLSSSMDKTVRLWHVSSTYCLKTFSHSDYVTCIQFNPVNDKYFISGSLDKKV 411
Query: 520 RIWNVHDRKIEDWNDLHEMVTAACYSPDGQVALVGSHKGSCHLFDTT 566
RIW++ +RKI DW DLHEM+TAACY+PDGQ ALVGSHKG CH++D +
Sbjct: 412 RIWSIQERKIVDWIDLHEMITAACYTPDGQGALVGSHKGKCHVYDIS 458
>Os12g0178633 Quinonprotein alcohol dehydrogenase-like domain containing protein
Length = 627
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 201/525 (38%), Positives = 266/525 (50%), Gaps = 100/525 (19%)
Query: 202 TGRQLTFEEFELCIGRSPIVQELMRRXXXXXXXXXXXXXXXXXKPR-RKPGG------WL 254
TG QL EE E IG +PIV+ LMRR P+ KP G WL
Sbjct: 71 TGVQLGLEEIEKFIGNTPIVKHLMRRGQSQHHSGQLASPSGGAPPKAEKPAGGKKKGGWL 130
Query: 255 RGIRHLA-GSVAYGRSSTXXXXXXXXXXXXXXXARRLSSATDDSLDGNGSRNAGRVRVRQ 313
+ I+ +A G + G +S + SSA+ R++V Q
Sbjct: 131 KNIKSVAIGFIDSGGNSKSTTSTTTSSAGANATSSSSSSASSTE----------RLKVHQ 180
Query: 314 YGKACKELTGLFMTQELAAHSGSIWCINFSLDGRYLASAGEDRVIHVWEVSXXXXXXXXX 373
GK+CKELTGL+M QE+ AH GSIW I FS DGR+LASAGED V+ +W+V
Sbjct: 181 SGKSCKELTGLYMCQEIMAHEGSIWSIKFSTDGRWLASAGEDHVVRIWQV---------- 230
Query: 374 XXXTVARENGGGCSP------------FLAAVGNGSPELATLSLSCADGGFVEKKRRPRM 421
N C P AA +G+ +T +LS K+ +
Sbjct: 231 -----VEANSPACLPNDGHSGPLPPHPPGAAPADGTSSSSTPALSQL------SKKSVKG 279
Query: 422 QSSRKSVGSDHLVVPECVFGFRDKPVCSLLGHAADVLDXXXXXXXXXXXXXMDKTVKLWD 481
+S R ++ +HLVVP+ VF D+P C L GH DVLD MDKTV+LWD
Sbjct: 280 KSGRDTL-PEHLVVPDKVFALADQPACVLEGHQDDVLDLTWSKTDQLLSSSMDKTVRLWD 338
Query: 482 ITTSTCLKTFSHTDYVTCIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEMVTA 541
TT CLK F+H DYVTCIQFNP DD FFISGSLD KVR+W++ DR++ DW DL+EMVTA
Sbjct: 339 TTTKACLKVFAHNDYVTCIQFNPADDRFFISGSLDAKVRLWSIPDRQVVDWTDLNEMVTA 398
Query: 542 ACYSPDGQVALVGSHKGSCHLFDTTEKKLQYKSQIELRIRKKKSGQKKITGFQFAPGSSS 601
A Y+PDGQ A++GSHKGSC + TT +++ + + ++ G
Sbjct: 399 ASYTPDGQGAIIGSHKGSCRFYKTTGGADRHRDE-----------EAQVAG--------- 438
Query: 602 EVLITSADSRIRVVNGDELVHKFKGFRNTSSQISASVAPNGKYVVCASEDSHVYVWRHDN 661
E H+ GF+NTSSQISA+ +G+YVVC SEDSHVY+WR
Sbjct: 439 -----------------EEDHRLPGFKNTSSQISAAYTSDGRYVVCPSEDSHVYLWRAAR 481
Query: 662 TSHPSR----SRSAVDV-------TNSYEHFHCHDVTVAITWPGA 695
+ P+ S + + S+E+F+C DV+ A+ WP A
Sbjct: 482 GAPPAAAAIGSIGGIGMKPKTWCTIRSFENFYCKDVSAAVPWPLA 526
>Os04g0568400 Quinoprotein amine dehydrogenase, beta chain-like domain containing
protein
Length = 698
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 269/519 (51%), Gaps = 36/519 (6%)
Query: 308 RVRVRQYGKACKELTGLFMTQELAAHSGSIWCINFSLDGRYLASAGEDRVIHVWEVSXXX 367
R++V Y K KEL+ ++ Q + AH G+I + FS DG+ LA+ GED V+ VW V
Sbjct: 205 RIKVHSYRKRSKELSAVYQGQVIKAHDGAILTMKFSPDGQLLATGGEDGVVRVWAVMQSE 264
Query: 368 XXXXXXXXXTV----ARENGGGCSPFLAAVGNGSPELATLSLSCADGGFVEKKRRPRMQS 423
+ AR G LA V E +++ ++
Sbjct: 265 DCKIPLDDPSCVYLKARRKYG-----LAPVN------------------AESEKKSKING 301
Query: 424 SRKSVGSDHLVVPECVFGFRDKPVCSLLGHAADVLDXXXXXXXXXXXXXMDKTVKLWDIT 483
+KS S +VVP VF ++PV GH+ DVLD DKTV++W+I
Sbjct: 302 LKKS-DSACIVVPTMVFQISEEPVHEFRGHSGDVLDLSWSSDKHLLSASTDKTVRMWEIG 360
Query: 484 TSTCLKTFSHTDYVTCIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEMVTAAC 543
+ C++ + H+++VTC+QFN D+N FISGS+D K+R+W++ + DW D+ ++VTA C
Sbjct: 361 YANCIRVYPHSNFVTCVQFNLADENLFISGSIDGKIRVWDITRSSVVDWVDIRDIVTAVC 420
Query: 544 YSPDGQVALVGSHKGSCHLFDTTEKKLQYKSQIELRIRKKKSGQKKITGFQFAPGSSSEV 603
Y P G+ +VG+ G+C ++ ++ L+ ++QI L KKKS K+ITGFQF P + S++
Sbjct: 421 YRPGGKGVVVGTITGNCRFYEISDNLLKLETQIALN-GKKKSSLKRITGFQFCPSNPSKL 479
Query: 604 LITSADSRIRVVNGDELVHKFKGFRNTSSQISASVAPNGKYVVCASEDSHVYVWRHDNTS 663
++TSADS+IR+++G ++ + G R+ S Q+SA+ P G++++ ASEDS+VYVW H+N
Sbjct: 480 MVTSADSKIRILDGTNVIQNYSGLRSGSCQLSATFTPEGQHIISASEDSNVYVWSHENQY 539
Query: 664 HPSRSRSAVDVTNSYEHFHCHDVTVAITWPGAEXXXXXXXXXXXXXXXXXAVMNTGRDAP 723
+ ++ T + EHF ++ +AI W G + + +
Sbjct: 540 ECACKQA--KTTQTSEHFRSNNAAIAIPWNGTKPRSPVPLSSQILPPQGDTFWSMSKAIK 597
Query: 724 VENSEHDLNGTVNRCTKRPVCEGVASTSN----PPADGVSTSWPDEKQSSAKSSPGHCSS 779
+S + ++ + P G+ + + + S +WP+E S +S S
Sbjct: 598 YNSSLCGKDSSIKKIVSTPAAPGIFNLNQEFFIESSCKSSATWPEEMLPSTTASVNLDES 657
Query: 780 DLCIGALDVQRRS-AWGLVIVTAGRGGEIRVFQNFGFPV 817
+ Q S +WG VIVTAG G IR FQNFG PV
Sbjct: 658 QFKLLRNCFQGTSNSWGQVIVTAGWDGRIRYFQNFGLPV 696
>Os04g0417800 WD40-like domain containing protein
Length = 680
Score = 239 bits (610), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 157/516 (30%), Positives = 241/516 (46%), Gaps = 68/516 (13%)
Query: 308 RVRVRQYGKACKELTGLFMTQELAAHSGSIWCINFSLDGRYLASAGEDRVIHVWEVSXXX 367
R +V+ K E + + + QE+ AH G I + FS G YLA+ GED ++ +W++
Sbjct: 229 RTKVQHRKKKTMEFSAVHLGQEIQAHKGLIKVMKFSPSGWYLATGGEDCIVRIWQI---- 284
Query: 368 XXXXXXXXXTVARENGGGCSPFLAAVGNGSPELATLSLSCADGGFVEKKRRPRMQSSRKS 427
+ + GG +P + +K + + R
Sbjct: 285 ------MEVEASSKLHGGDNP---------------------QNYDDKITIIKTELGR-- 315
Query: 428 VGSDHL--VVPECVFGFRDKPVCSLLGHAADVLDXXXXXXXXXXXXXMDKTVKLWDITTS 485
G +H VVP+ F + P+ GH D+LD DK V+LW +
Sbjct: 316 -GKNHALAVVPKKGFRISETPLHEFQGHTDDILDMAWSESDYLLTSSKDKMVRLWKVGCD 374
Query: 486 TCLKTFSHTDYVTCIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEMVTAACYS 545
CL F H DYVTC+QFNP+D+ +FISGS+D KVR+W+ D+++ DW D +++TA Y
Sbjct: 375 GCLGLFKHKDYVTCVQFNPIDERYFISGSIDGKVRVWDALDKRVVDWTDTRKIITALSYQ 434
Query: 546 PDGQVALVGSHKGSCHLFDTTEKKLQYKSQIELRIRKKKSGQKKITGFQFAPGSSSEVLI 605
PDG+ +VG+ G C +D + + +Q EL ++ KKS ++ Q SS + I
Sbjct: 435 PDGKGFIVGTTSGECRFYDQSGENIQLDK--ELFMQGKKSAVHRVNSLQSRSSDSSRITI 492
Query: 606 TSADSRIRVVNGDELVHKFKGFRNTSSQISASVAPNGKYVVCASEDSHVYVWRHDNTSHP 665
TS S+IRV +G +++ KF+G N + S S+ +G+Y++ A DS+VY+W D S
Sbjct: 493 TSTGSKIRVADGVDIIQKFEGPWNLKALSSPSLTSDGRYLISAGLDSNVYIWNFDIPSVA 552
Query: 666 SRSRSAVDVTNSYEHFHCHDVTVAITWPGAEXXXXXXXXXXXXXXXXXAVMNTGRDAPVE 725
A V S E F DVT A+ WPG ++ +P+
Sbjct: 553 DHKGEAKSV-RSCEKFFSKDVTTAVPWPGLH-------QERQQVKNSSSLTEESVSSPIL 604
Query: 726 NSEHDLNGTVNRCTKRPVCEGVASTSNPPADGV--STSWPDEKQSSAKSSPGHCSSDLCI 783
+ + RC ADG+ + +WP+EK AK++ SD C+
Sbjct: 605 HRHGERRSPAARCF---------------ADGMKGTPTWPEEKLPPAKAADAPRLSD-CL 648
Query: 784 GALDVQRRSAWGLVIVTAGRGGEIRVFQNFGFPVQV 819
+ AW VIVTA R G IR F N+G PV++
Sbjct: 649 STIS----PAWNTVIVTASRDGVIRSFHNYGLPVRL 680
>Os02g0539900 WD40-like domain containing protein
Length = 672
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 159/529 (30%), Positives = 234/529 (44%), Gaps = 92/529 (17%)
Query: 300 GNGSRNAGRVRVRQYGKACKELTGLFMTQELAAHSGSIWCINFSLDGRYLASAGEDRVIH 359
G S R +V Q K + T ++M QE+ AH G I + FS G +LAS GED V+
Sbjct: 227 GLNSGTLYRTKVHQQNKKWMDFTAVYMCQEIQAHEGLIRVMKFSSSGWHLASGGEDCVVR 286
Query: 360 VWEVSXXXXXXXXXXXXTVARENGGGCSPFLAAVGNGSPELATLSLSCADGGFVEKKRRP 419
VW+++ SP+L + P
Sbjct: 287 VWQITEV----------------------------ESSPDLYGRDV-------------P 305
Query: 420 RMQSSRKSVGSDHL-VVPECVFGFRDKPVCSLLGHAADVLDXXXXXXXXXXXXXMDKTVK 478
+ +K V L ++P+ VF + P+ GH +DVLD D T++
Sbjct: 306 EDMNKKKDVKIKPLAIIPKKVFSITETPLHEFQGHTSDVLDLAWSKSDFLLSSSKDTTIR 365
Query: 479 LWDITTSTCLKTFSHTDYVTCIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEM 538
+W + CL F H DYVTC+QFNPVD+ +FISGS+D KVR+W+V D+++ DW+D +
Sbjct: 366 MWKVGCYDCLAVFRHGDYVTCVQFNPVDERYFISGSIDGKVRVWDVSDKRVVDWDDTKYI 425
Query: 539 VTAACYSPDGQVALVGSHKGSCHLFDTTEKKLQYKSQIE----LRIRKKKSGQKKITGFQ 594
+TA + PDG+ +VGS KG C +D + IE +RI++++ KIT Q
Sbjct: 426 ITAISHRPDGKGFVVGSVKGRCRFYDQS-GLFPLGRNIERNKLMRIKRRRCAANKITNIQ 484
Query: 595 FAPGSSSEVLITSADSRIRVVNGDELVHKFKGFRNTSSQISASVAPNGKYVVCASEDSHV 654
F+ G S ++ITS D +IRV G ++ KF+G + + S+ P+G+Y++ A DS +
Sbjct: 485 FSQGHPSRMIITSKDHKIRVSEGHKITQKFQGQWRSKVLVPPSLTPDGRYLISAGRDSKI 544
Query: 655 YVWRHDNTSHPSRSRSAVDVTNSYEHFHCHDVTVAITWPGAEXXXXXXXXXXXXXXXXXA 714
+W D V +S E F VT W A
Sbjct: 545 RIWNFDGGG------RRRRVVSSRELFFSEGVTAVAPWARA-----------------MG 581
Query: 715 VMNTGRDAPVENSEHDLNGTVNRCTKRPVCEGVASTSNPPADG----VSTSWPDEKQSSA 770
G DAP C R C P DG +T+WP+E+ +
Sbjct: 582 GGGGGADAP------------TLCYDRERCSFGTWFVVP--DGAAAAAATTWPEERLLPS 627
Query: 771 KSSPGHCSSDLCIGALDVQRRSAWGLVIVTAGRGGEIRVFQNFGFPVQV 819
D C Q +AW +V+VT RGG IR F N+G PV++
Sbjct: 628 LRYVNCAGMDDCRS----QVPAAWNMVVVTGSRGGAIRAFHNYGLPVRL 672
>Os04g0529400 WD40-like domain containing protein
Length = 150
Score = 224 bits (571), Expect = 2e-58, Method: Composition-based stats.
Identities = 102/132 (77%), Positives = 118/132 (89%)
Query: 497 VTCIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLHEMVTAACYSPDGQVALVGSH 556
VTCIQFNPVDD +FISGSLDEKVRIW++ R+I DWNDLHEMVTAACY+PDGQ ALVGSH
Sbjct: 3 VTCIQFNPVDDRYFISGSLDEKVRIWSIPGREIVDWNDLHEMVTAACYTPDGQRALVGSH 62
Query: 557 KGSCHLFDTTEKKLQYKSQIELRIRKKKSGQKKITGFQFAPGSSSEVLITSADSRIRVVN 616
KGSCH++DT++ KL K QI+L+ +K+KS QKKITGFQF PGSSS+VLITSADSRIRVV+
Sbjct: 63 KGSCHIYDTSDNKLLQKKQIDLQNKKRKSNQKKITGFQFLPGSSSKVLITSADSRIRVVD 122
Query: 617 GDELVHKFKGFR 628
G ELVHKFKG +
Sbjct: 123 GFELVHKFKGIK 134
>Os03g0725400 Similar to WD-repeat protein 5 (BMP2-induced 3-kb gene protein)
(WD-repeat protein BIG-3)
Length = 324
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 446 PVCSLLGHAADVLDXXXXXXXXXXXXXMD-KTVKLWDITTST---------CLKTFS-HT 494
PV L GH V D D +TV++WD+ +KT S HT
Sbjct: 54 PVAELAGHGEGVSDLAFSPDGRLIASASDDRTVRIWDLGDGGGGGGGGEPRLMKTLSGHT 113
Query: 495 DYVTCIQFNPVDDNFFISGSLDEKVRIWNVHDRKIEDWNDLH-EMVTAACYSPDGQVALV 553
+Y C+ F+P N SGS DE VR+W V + H E VT+ ++ DG + +
Sbjct: 114 NYAFCLAFSP-HGNMLASGSFDETVRVWEVRSGRCLRVLPAHSEPVTSVDFNRDGAMIVS 172
Query: 554 GSHKGSCHLFDTTEKKLQYKSQIELRIRKKKSGQKKITGFQFAPGSSSEVLITSADSRIR 613
GS+ G C ++D+ K+ I+ ++ +F+P + VL + DS++R
Sbjct: 173 GSYDGLCRIWDSATGHC-IKTLID-------DESPPVSFAKFSP-NGKFVLAATLDSKLR 223
Query: 614 VVN--GDELVHKFKGFRNTSSQISASVA-PNGKYVVCASEDSHVYVW 657
+ N + + + G NT I A+ + NGKY+V SED VY+W
Sbjct: 224 LWNFSAGKFLKTYTGHVNTKYCIPAAFSITNGKYIVSGSEDKCVYIW 270
>Os07g0572000 WD40-like domain containing protein
Length = 338
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 37/212 (17%)
Query: 474 DKTVKLWDI-----------------------TTSTCLKTFS-HTDYVTCIQFNPVDDNF 509
D+T+++WD+ C++ HT++V FNP ++
Sbjct: 88 DRTLRIWDVRPVLAGLNPGSGGGGGGAQPADPNADRCIRVLKGHTNFVFSANFNPQTNST 147
Query: 510 FISGSLDEKVRIWNVHDRKIEDWNDLH-EMVTAACYSPDGQVALVGSHKGSCHLFDTTEK 568
SG D VRIW+V + D H E VT+ + DG + + GSH G+C ++D
Sbjct: 148 VASGGFDCTVRIWDVKSGRCVRAIDAHSEPVTSVHFIRDGSIIVSGSHDGTCKIWDAGT- 206
Query: 569 KLQYKSQIELRIRKKKSGQKKITGFQFAPGSSSEVLITSADSRIRVVN--GDELVHKFKG 626
S ++ I +KK ++ F+P + +L+ + D +++ N + + + G
Sbjct: 207 ----GSCLKTVIDEKKPA---VSFSMFSP-NGKFILVAALDDTLKLCNFASGKFLKMYSG 258
Query: 627 FRNTSSQI-SASVAPNGKYVVCASEDSHVYVW 657
N + SA NGKY+V SED+ VY+W
Sbjct: 259 HVNRKYCLQSAFSVTNGKYIVSGSEDNCVYIW 290
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 23,925,010
Number of extensions: 934098
Number of successful extensions: 2978
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 2930
Number of HSP's successfully gapped: 12
Length of query: 819
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 710
Effective length of database: 11,344,475
Effective search space: 8054577250
Effective search space used: 8054577250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)