Os02g0638900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os02g0638900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.19 | 0.226 | 10.6 | 0.0138 | 0.787 | 0.437 | 0.257 | -0.598 | 0.00681 | 5.95 | 29.7 | 91 | -- | -- |
| 23.65 | 0.226 | 10.6 | -0.0646 | 0.773 | 0.476 | 0.207 | -- | 0.000688 | 5.95 | 29.4 | 121 | -- | -- |
| 23.34 | 0.225 | 10.6 | -0.0036 | 0.787 | 0.442 | -- | -0.504 | 0.00224 | 5.95 | 29.71 | 91 | -- | -- |
| 23.66 | 0.227 | 10.6 | -0.0805 | 0.773 | 0.454 | -- | -- | -0.02 | 5.93 | 29.5 | 122 | -- | -- |
| 46.84 | 0.319 | 10.6 | 0.143 | -- | 1.1 | -- | -0.356 | 0.11 | -- | 31.62 | 268 | -- | -- |
| 26.29 | 0.24 | 10.6 | -0.194 | 0.89 | -- | 0.147 | -- | -0.108 | 5.53 | -- | -- | -- | -- |
| 26.34 | 0.24 | 10.6 | -0.194 | 0.89 | -- | -- | -- | -0.109 | 5.51 | -- | -- | -- | -- |
| 46.95 | 0.319 | 10.6 | 0.0844 | -- | 1.09 | -- | -- | 0.098 | -- | 31.3 | 269 | -- | -- |
| 23.81 | 0.227 | 10.6 | -- | 0.766 | 0.481 | -- | -- | -0.01 | 5.99 | 29.5 | 113 | -- | -- |
| 67.56 | 0.384 | 10.6 | -0.165 | -- | -- | -- | -- | -0.087 | -- | -- | -- | -- | -- |
| 27.33 | 0.245 | 10.6 | -- | 0.887 | -- | -- | -- | -0.0871 | 5.52 | -- | -- | -- | -- |
| 47.12 | 0.32 | 10.6 | -- | -- | 1.07 | -- | -- | 0.0833 | -- | 31.4 | 269 | -- | -- |
| 68.28 | 0.386 | 10.6 | -- | -- | -- | -- | -- | -0.0688 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 5 | 20.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 9 | 20.08 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 13 | 20.10 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 24 | 20.28 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 31 | 20.37 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 76 | 20.78 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 85 | 20.88 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 128 | 21.16 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 139 | 21.18 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 156 | 21.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 184 | 21.32 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 200 | 21.37 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 220 | 21.43 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 227 | 21.45 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 229 | 21.46 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 231 | 21.46 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 17 |
| 240 | 21.48 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 257 | 21.53 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 277 | 21.59 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 10 |
| 281 | 21.60 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 285 | 21.61 | wind | 7.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 288 | 21.62 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 298 | 21.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 4 |
| 299 | 21.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 303 | 21.67 | temperature | 10.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 309 | 21.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 325 | 21.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 327 | 21.70 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 328 | 21.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 335 | 21.71 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 352 | 21.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 390 | 21.78 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 392 | 21.78 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 393 | 21.78 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 396 | 21.78 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 397 | 21.78 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 398 | 21.78 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 414 | 21.80 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 425 | 21.82 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 431 | 21.83 | temperature | 15.0 | 10 | > th | dose independent | rect. | 8 | 20 |
| 444 | 21.84 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 446 | 21.84 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 452 | 21.84 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 18 |
| 469 | 21.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 471 | 21.86 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 472 | 21.86 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 475 | 21.86 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 476 | 21.86 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 478 | 21.86 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 486 | 21.86 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 495 | 21.87 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 501 | 21.87 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 502 | 21.87 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 520 | 21.89 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 524 | 21.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 15 |
| 528 | 21.89 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 534 | 21.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 553 | 21.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 9 |
| 558 | 21.91 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 561 | 21.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 568 | 21.93 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 571 | 21.93 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 573 | 21.93 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 574 | 21.93 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 577 | 21.93 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 588 | 21.94 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 591 | 21.94 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 592 | 21.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 593 | 21.94 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 600 | 21.94 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 604 | 21.95 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 607 | 21.95 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 618 | 21.96 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 631 | 21.97 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 637 | 21.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 20 |
| 639 | 21.97 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 651 | 21.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 658 | 21.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 660 | 21.98 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 665 | 21.98 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 668 | 21.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 670 | 21.99 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 680 | 22.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 708 | 22.01 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 726 | 22.02 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 800 | 22.07 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 801 | 22.07 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 803 | 22.07 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 804 | 22.07 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 810 | 22.07 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 813 | 22.07 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 816 | 22.07 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 819 | 22.07 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 851 | 22.09 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 852 | 22.09 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 863 | 22.09 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 867 | 22.09 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 922 | 22.12 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 927 | 22.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 981 | 22.15 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 983 | 22.15 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 20 |