BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0579800 Os02g0579800|AK059931
(162 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0579800 Similar to Fw2.2 340 2e-94
Os04g0461600 Similar to Fw2.2 184 3e-47
Os03g0830500 Similar to PGPS/D12 177 3e-45
Os03g0830200 Protein of unknown function Cys-rich family pr... 176 6e-45
Os02g0580000 Protein of unknown function Cys-rich family pr... 171 2e-43
Os02g0763000 Protein of unknown function Cys-rich family pr... 157 3e-39
Os06g0266300 150 3e-37
Os10g0112100 Protein of unknown function Cys-rich family pr... 143 5e-35
Os03g0830300 Similar to Fw2.2 133 6e-32
Os03g0829900 131 2e-31
Os03g0829800 Similar to Placenta-specific gene 8 protein (C... 108 2e-24
Os02g0286933 Protein of unknown function Cys-rich family pr... 81 3e-16
Os01g0267400 Protein of unknown function Cys-rich family pr... 64 5e-11
>Os02g0579800 Similar to Fw2.2
Length = 162
Score = 340 bits (872), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 162/162 (100%), Positives = 162/162 (100%)
Query: 1 MYSKPEDVGGGVTTAFAMQGKVPLAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIID 60
MYSKPEDVGGGVTTAFAMQGKVPLAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIID
Sbjct: 1 MYSKPEDVGGGVTTAFAMQGKVPLAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIID 60
Query: 61 RGSSSCGTSGALYALVMLLTGCNCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALS 120
RGSSSCGTSGALYALVMLLTGCNCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALS
Sbjct: 61 RGSSSCGTSGALYALVMLLTGCNCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALS 120
Query: 121 QEYRELKKRGFDMNLGWHANMERQGHKPAMTMPPHMFPGMTR 162
QEYRELKKRGFDMNLGWHANMERQGHKPAMTMPPHMFPGMTR
Sbjct: 121 QEYRELKKRGFDMNLGWHANMERQGHKPAMTMPPHMFPGMTR 162
>Os04g0461600 Similar to Fw2.2
Length = 179
Score = 184 bits (466), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 105/140 (75%), Gaps = 1/140 (0%)
Query: 23 PLAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGC 82
P+A+WS+GL +C+DD G CC+T CPC+ FG+IAEI+D+G++SC G LY L+ + TG
Sbjct: 41 PVASWSSGLCDCYDDVGGCCLTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMATGF 100
Query: 83 NCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANME 142
C YSC YR+++ QYGLQEKPC DC VH+ C PCAL QEYRELK RGFDM+LGW NME
Sbjct: 101 ACAYSCCYRSRLHQQYGLQEKPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQGNME 160
Query: 143 RQGHKPAMTMPPHMFPGMTR 162
R G K T PP M PGMTR
Sbjct: 161 RMG-KGVATAPPQMHPGMTR 179
>Os03g0830500 Similar to PGPS/D12
Length = 141
Score = 177 bits (449), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 101/137 (73%), Gaps = 1/137 (0%)
Query: 21 KVPLAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLT 80
K AAWSTGL +CFDDCG CC+TC CPCITFG++AE++DRGS+SCGTSGALYAL+ +T
Sbjct: 3 KPSAAAWSTGLLDCFDDCGLCCMTCWCPCITFGRVAEMVDRGSTSCGTSGALYALLATVT 62
Query: 81 GCNCVYSCFYRAKMRSQYGL-QEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHA 139
GC VYSC YR KMR+QYGL + CADC VHF+C CAL QEYREL RG+D LGW
Sbjct: 63 GCQFVYSCVYRGKMRAQYGLGDDAACADCCVHFWCNKCALCQEYRELVARGYDPKLGWDL 122
Query: 140 NMERQGHKPAMTMPPHM 156
N++R A HM
Sbjct: 123 NVQRGAAAAAAPAVQHM 139
>Os03g0830200 Protein of unknown function Cys-rich family protein
Length = 150
Score = 176 bits (446), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 83/119 (69%), Positives = 94/119 (78%)
Query: 22 VPLAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTG 81
V AAWSTGL +CFDDCG CC+TC CPCITFG++AE++DRGS+SCGT GALY L+ TG
Sbjct: 14 VGSAAWSTGLCDCFDDCGLCCLTCWCPCITFGRVAEMVDRGSTSCGTGGALYGLLCAFTG 73
Query: 82 CNCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHAN 140
C +YSC YR KMR+QYGL E CADC VHF CEPCAL QEYREL RG+D LGWH N
Sbjct: 74 CQWIYSCTYRGKMRTQYGLAEAGCADCCVHFCCEPCALCQEYRELVARGYDPKLGWHLN 132
>Os02g0580000 Protein of unknown function Cys-rich family protein
Length = 136
Score = 171 bits (432), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/119 (74%), Positives = 101/119 (84%)
Query: 18 MQGKVPLAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVM 77
MQ + WST LF+CFDD NC +T LCPCITFGQIAEI+DRGSSSCGTSG+LYALV
Sbjct: 1 MQDQAAPVPWSTDLFDCFDDSSNCFMTWLCPCITFGQIAEIVDRGSSSCGTSGSLYALVF 60
Query: 78 LLTGCNCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLG 136
L+TGC+C+YSC YR+K+RSQYGLQE PC DC VH +CEPCAL QEYRELKKRGFDM+LG
Sbjct: 61 LVTGCSCIYSCIYRSKLRSQYGLQETPCPDCLVHLWCEPCALCQEYRELKKRGFDMSLG 119
>Os02g0763000 Protein of unknown function Cys-rich family protein
Length = 181
Score = 157 bits (398), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Query: 24 LAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCN 83
L WSTGLF+C DD GNC +TC+CPCITFGQ+A+I+D+G+ C SG YAL + +G
Sbjct: 41 LTRWSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYAL-LCASGMG 99
Query: 84 CVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANMER 143
C+YSCFYR+KMR+Q+ L E C D VHF CE CAL QEYRELK RGFD+ +GW AN++R
Sbjct: 100 CLYSCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVDR 159
Query: 144 Q 144
Q
Sbjct: 160 Q 160
>Os06g0266300
Length = 417
Score = 150 bits (380), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 96/139 (69%), Gaps = 9/139 (6%)
Query: 27 WSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCNCVY 86
WS LF+CF D G CC+TC CPCITFG+IAEI+D+GS+SC G LY L+ + GC +Y
Sbjct: 155 WSVKLFDCFGDSGTCCLTCWCPCITFGRIAEIVDKGSTSCCMHGTLYVLLATI-GCQWLY 213
Query: 87 SCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANMER--- 143
+C R+ MR+QY LQ+ PC DC VHFFC+ CAL QEY+EL+KRGF+M+ GW + +
Sbjct: 214 ACTKRSSMRAQYNLQQSPCLDCCVHFFCDSCALCQEYKELEKRGFNMSKGWEGSNKMVGC 273
Query: 144 -QGHKPA----MTMPPHMF 157
QG KP +T+ P F
Sbjct: 274 VQGMKPPRKQRITIQPRCF 292
>Os10g0112100 Protein of unknown function Cys-rich family protein
Length = 186
Score = 143 bits (361), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/139 (52%), Positives = 89/139 (64%), Gaps = 7/139 (5%)
Query: 26 AWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTG--CN 83
AW+T L +C DDC CC+ C CPCI GQIAEI+DRGSSSC + LY LV ++ C
Sbjct: 49 AWTTALCDCADDCNTCCMACWCPCIPVGQIAEIVDRGSSSCALNAVLYCLVFHVSAGMCQ 108
Query: 84 CVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANMER 143
VYSC YRA++R+ Y L E PC+DC V F C+ C+++Q +RELK RG D NLGW N R
Sbjct: 109 WVYSCAYRARLRAAYDLPETPCSDCLVTFCCQTCSIAQMHRELKNRGHDPNLGWEVNSRR 168
Query: 144 QGHKPAMTMPPHM-FPGMT 161
MT P H GMT
Sbjct: 169 T----MMTPPQHQAMEGMT 183
>Os03g0830300 Similar to Fw2.2
Length = 146
Score = 133 bits (335), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 96/132 (72%), Gaps = 11/132 (8%)
Query: 14 TAFAMQGKVPL--AAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGA 71
+A A+ G VP+ AAWSTGL +CFDDCG CC TC CPCITFG++AEI+DRGS+S GT GA
Sbjct: 5 SAGAVTG-VPIGSAAWSTGLCDCFDDCGLCCTTCWCPCITFGRVAEIVDRGSTSFGTGGA 63
Query: 72 LYALVMLLTGCNCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGF 131
LYAL+ GC C YR KMR+Q+GL + C DC VH CE CAL QEYREL RG+
Sbjct: 64 LYALL----GCTCT----YRGKMRAQHGLGDAACGDCCVHCCCESCALCQEYRELVARGY 115
Query: 132 DMNLGWHANMER 143
D LGWH N+ER
Sbjct: 116 DPKLGWHLNVER 127
>Os03g0829900
Length = 136
Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Query: 27 WSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCNCVY 86
WS+GLF CF+DC CC+T +CPCITFG+ AEI+ RG +C +G + L+ C+C+Y
Sbjct: 9 WSSGLFACFNDCEVCCLTTVCPCITFGRSAEIVSRGERTCCAAGVMCVLLGFFAHCHCLY 68
Query: 87 SCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANMERQGH 146
SC YR KMR + L E PC DC VH C CAL QEYR LK G+ +LGW N + H
Sbjct: 69 SCCYRGKMRDSFHLPEDPCCDCCVHALCLQCALCQEYRHLKSLGYKPSLGWLGNNQ---H 125
Query: 147 KPAMTMPP 154
P PP
Sbjct: 126 VPPKHNPP 133
>Os03g0829800 Similar to Placenta-specific gene 8 protein (C15 protein)
Length = 143
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 25 AAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCNC 84
A WS+GL +CFDD G CC+T CPCITFG++AEI+DRGS+SCG SGALY + ++TG
Sbjct: 19 APWSSGLCDCFDDYGLCCMTWWCPCITFGRVAEIVDRGSTSCGHSGALYVFLAVITGFQW 78
Query: 85 VYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANMERQ 144
+Y R R L+ EYREL RG+D LGWH NMER+
Sbjct: 79 MYLHLPRQDARPVRPLRRALRRL---------LHPLLEYRELAARGYDPKLGWHLNMERR 129
Query: 145 GHKPAMTMPPHM 156
A HM
Sbjct: 130 AAAAAAPAVQHM 141
>Os02g0286933 Protein of unknown function Cys-rich family protein
Length = 220
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 27 WSTGLFNCFDD-CGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCNCV 85
W T L +CF D C + C++ P ++ I EI+D+G + +Y L+ G
Sbjct: 91 WQTSLCDCFGDGCESFCLSAWFPWLSISCIGEIVDQGFTEWCCICFIY-LIAAYFGVWWA 149
Query: 86 YSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDM 133
Y+ +YR K+R+QYGL E P DC H FC CAL+QE+REL RG+++
Sbjct: 150 YAGWYRGKLRAQYGLPESPLPDCLTHLFCHWCALAQEHRELAARGYNV 197
>Os01g0267400 Protein of unknown function Cys-rich family protein
Length = 129
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 21/101 (20%)
Query: 47 CPCITFGQIAEIIDRGS--SSCGTSGALYALVMLLTGCNCV----------------YSC 88
CPC FG+ A+ + G+ SC T L+ L LT CV Y+C
Sbjct: 11 CPCFLFGRNAQFLGSGTLAGSCTTHCMLWGL---LTSLCCVFTGGLVLAVPGSAVACYAC 67
Query: 89 FYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKR 129
YR +R++Y L E PC D H FC CA+ QEYRE+++R
Sbjct: 68 GYRQALRAKYNLPEAPCGDLTTHLFCHLCAICQEYREIRER 108
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.139 0.484
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,219,414
Number of extensions: 239265
Number of successful extensions: 662
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 652
Number of HSP's successfully gapped: 13
Length of query: 162
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 69
Effective length of database: 12,179,899
Effective search space: 840413031
Effective search space used: 840413031
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 152 (63.2 bits)