Os02g0763000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function Cys-rich family protein.
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Os02g0763000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function Cys-rich family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.2 | 0.477 | 7.98 | -1.13 | 0.651 | 0.494 | -0.469 | 2.66 | 0.141 | 3.96 | 60.07 | 1472 | -- | -- |
| 113.29 | 0.496 | 7.97 | -0.833 | 0.621 | 0.634 | -0.425 | -- | 0.187 | 4.14 | 48 | 1450 | -- | -- |
| 103.59 | 0.474 | 7.98 | -1.12 | 0.664 | 0.509 | -- | 2.66 | 0.143 | 3.68 | 59.95 | 1429 | -- | -- |
| 112.16 | 0.493 | 7.96 | -0.838 | 0.658 | 0.817 | -- | -- | 0.234 | 3.66 | 28.75 | 2854 | -- | -- |
| 123.7 | 0.518 | 7.95 | -1.12 | -- | 0.769 | -- | 2.21 | 0.217 | -- | 66.53 | 1676 | -- | -- |
| 123.8 | 0.522 | 7.97 | -0.842 | 0.627 | -- | -0.528 | -- | 0.154 | 4.06 | -- | -- | -- | -- |
| 124.45 | 0.522 | 7.97 | -0.836 | 0.622 | -- | -- | -- | 0.157 | 3.75 | -- | -- | -- | -- |
| 128.22 | 0.53 | 7.97 | -0.83 | -- | 0.556 | -- | -- | 0.204 | -- | 64.65 | 1760 | -- | -- |
| 130.62 | 0.532 | 7.94 | -- | 0.677 | 0.837 | -- | -- | 0.319 | 3.53 | 28.82 | 2756 | -- | -- |
| 145.81 | 0.564 | 7.97 | -0.81 | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
| 142.87 | 0.559 | 7.95 | -- | 0.605 | -- | -- | -- | 0.25 | 3.77 | -- | -- | -- | -- |
| 145.13 | 0.561 | 7.95 | -- | -- | 0.892 | -- | -- | 0.294 | -- | 26.33 | 1762 | -- | -- |
| 163.12 | 0.596 | 7.95 | -- | -- | -- | -- | -- | 0.263 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 2 | 94.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 7 | 94.85 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 8 | 94.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 13 | 95.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 14 | 95.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 15 | 95.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 16 | 95.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 8 |
| 23 | 95.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 25 | 95.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 31 | 95.83 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 34 | 95.91 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 36 | 95.93 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 4 |
| 38 | 95.94 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 50 | 96.11 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 53 | 96.20 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 10 | 4 |
| 63 | 96.33 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 73 | 96.38 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 6 | 10 |
| 82 | 96.44 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 94 | 96.53 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 123 | 96.64 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 124 | 96.64 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 135 | 96.69 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 137 | 96.70 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 0 | NA |
| 142 | 96.72 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 158 | 96.76 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 181 | 96.82 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 191 | 96.84 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 203 | 96.88 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 232 | 96.93 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 260 | 96.98 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 288 | 97.04 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 362 | 97.17 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 419 | 97.24 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 458 | 97.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 547 | 97.40 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 571 | 97.43 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 573 | 97.43 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 619 | 97.47 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 626 | 97.48 | temperature | 20.0 | 14400 | < th | dose independent | sin | 16 | NA |
| 667 | 97.52 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 806 | 97.66 | temperature | 20.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 840 | 97.69 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 4 | 21 |
| 868 | 97.73 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 15 | 11 |
| 909 | 97.77 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 914 | 97.77 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 4 | 18 |
| 1000 | 97.84 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |