BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0763000 Os02g0763000|J065201H07
(181 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0763000 Protein of unknown function Cys-rich family pr... 350 4e-97
Os02g0579800 Similar to Fw2.2 157 3e-39
Os04g0461600 Similar to Fw2.2 140 7e-34
Os03g0830200 Protein of unknown function Cys-rich family pr... 132 2e-31
Os02g0580000 Protein of unknown function Cys-rich family pr... 131 2e-31
Os03g0830500 Similar to PGPS/D12 129 8e-31
Os06g0266300 129 1e-30
Os10g0112100 Protein of unknown function Cys-rich family pr... 113 7e-26
Os03g0829900 104 3e-23
Os03g0830300 Similar to Fw2.2 100 1e-21
Os03g0829800 Similar to Placenta-specific gene 8 protein (C... 73 1e-13
Os02g0286933 Protein of unknown function Cys-rich family pr... 68 4e-12
>Os02g0763000 Protein of unknown function Cys-rich family protein
Length = 181
Score = 350 bits (897), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 171/181 (94%), Positives = 171/181 (94%)
Query: 1 MYPSAPPDAYNKYSAGXXXXXXXXXXYQLPTMNTPRTGGGLTRWSTGLFHCMDDPGNCLI 60
MYPSAPPDAYNKYSAG YQLPTMNTPRTGGGLTRWSTGLFHCMDDPGNCLI
Sbjct: 1 MYPSAPPDAYNKYSAGAPPTAPPPATYQLPTMNTPRTGGGLTRWSTGLFHCMDDPGNCLI 60
Query: 61 TCVCPCITFGQVADIVDKGTCPCLASGTAYALLCASGMGCLYSCFYRSKMRAQFDLDEGD 120
TCVCPCITFGQVADIVDKGTCPCLASGTAYALLCASGMGCLYSCFYRSKMRAQFDLDEGD
Sbjct: 61 TCVCPCITFGQVADIVDKGTCPCLASGTAYALLCASGMGCLYSCFYRSKMRAQFDLDEGD 120
Query: 121 CPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVDRQRRGVTGASVMGAPGVPVGMM 180
CPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVDRQRRGVTGASVMGAPGVPVGMM
Sbjct: 121 CPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVDRQRRGVTGASVMGAPGVPVGMM 180
Query: 181 R 181
R
Sbjct: 181 R 181
>Os02g0579800 Similar to Fw2.2
Length = 162
Score = 157 bits (398), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Query: 41 LTRWSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYAL-LCASGMG 99
L WSTGLF+C DD GNC +TC+CPCITFGQ+A+I+D+G+ C SG YAL + +G
Sbjct: 24 LAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGCN 83
Query: 100 CLYSCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVDR 159
C+YSCFYR+KMR+Q+ L E C D VHF CE CAL QEYRELK RGFD+ +GW AN++R
Sbjct: 84 CVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANMER 143
Query: 160 Q 160
Q
Sbjct: 144 Q 144
>Os04g0461600 Similar to Fw2.2
Length = 179
Score = 140 bits (352), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 41 LTRWSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYALLC-ASGMG 99
+ WS+GL C DD G C +T CPC+ FG++A+IVD+G C A GT Y LL A+G
Sbjct: 42 VASWSSGLCDCYDDVGGCCLTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMATGFA 101
Query: 100 CLYSCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVDR 159
C YSC YRS++ Q+ L E C D VH+CC CALCQEYRELK+RGFD+ +GW N++R
Sbjct: 102 CAYSCCYRSRLHQQYGLQEKPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQGNMER 161
Query: 160 QRRGVTGASVMGAPGV 175
+GV A PG+
Sbjct: 162 MGKGVATAPPQMHPGM 177
>Os03g0830200 Protein of unknown function Cys-rich family protein
Length = 150
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 79/118 (66%), Gaps = 1/118 (0%)
Query: 40 GLTRWSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYALLCA-SGM 98
G WSTGL C DD G C +TC CPCITFG+VA++VD+G+ C G Y LLCA +G
Sbjct: 15 GSAAWSTGLCDCFDDCGLCCLTCWCPCITFGRVAEMVDRGSTSCGTGGALYGLLCAFTGC 74
Query: 99 GCLYSCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAAN 156
+YSC YR KMR Q+ L E C D VHFCCE CALCQEYREL RG+D +GW N
Sbjct: 75 QWIYSCTYRGKMRTQYGLAEAGCADCCVHFCCEPCALCQEYRELVARGYDPKLGWHLN 132
>Os02g0580000 Protein of unknown function Cys-rich family protein
Length = 136
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Query: 44 WSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYALL-CASGMGCLY 102
WST LF C DD NC +T +CPCITFGQ+A+IVD+G+ C SG+ YAL+ +G C+Y
Sbjct: 10 WSTDLFDCFDDSSNCFMTWLCPCITFGQIAEIVDRGSSSCGTSGSLYALVFLVTGCSCIY 69
Query: 103 SCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIG 152
SC YRSK+R+Q+ L E CPD LVH CE CALCQEYRELK RGFD+ +G
Sbjct: 70 SCIYRSKLRSQYGLQETPCPDCLVHLWCEPCALCQEYRELKKRGFDMSLG 119
>Os03g0830500 Similar to PGPS/D12
Length = 141
Score = 129 bits (325), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 82/119 (68%), Gaps = 4/119 (3%)
Query: 44 WSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYALLCASGMGC--L 101
WSTGL C DD G C +TC CPCITFG+VA++VD+G+ C SG YALL A+ GC +
Sbjct: 9 WSTGLLDCFDDCGLCCMTCWCPCITFGRVAEMVDRGSTSCGTSGALYALL-ATVTGCQFV 67
Query: 102 YSCFYRSKMRAQFDL-DEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVDR 159
YSC YR KMRAQ+ L D+ C D VHF C CALCQEYREL RG+D +GW NV R
Sbjct: 68 YSCVYRGKMRAQYGLGDDAACADCCVHFWCNKCALCQEYRELVARGYDPKLGWDLNVQR 126
>Os06g0266300
Length = 417
Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 75/114 (65%)
Query: 43 RWSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYALLCASGMGCLY 102
WS LF C D G C +TC CPCITFG++A+IVDKG+ C GT Y LL G LY
Sbjct: 154 EWSVKLFDCFGDSGTCCLTCWCPCITFGRIAEIVDKGSTSCCMHGTLYVLLATIGCQWLY 213
Query: 103 SCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAAN 156
+C RS MRAQ++L + C D VHF C+ CALCQEY+EL+ RGF++ GW +
Sbjct: 214 ACTKRSSMRAQYNLQQSPCLDCCVHFFCDSCALCQEYKELEKRGFNMSKGWEGS 267
>Os10g0112100 Protein of unknown function Cys-rich family protein
Length = 186
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 78/128 (60%), Gaps = 6/128 (4%)
Query: 35 PRTGGGLTRWSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYALL- 93
P GG W+T L C DD C + C CPCI GQ+A+IVD+G+ C + Y L+
Sbjct: 44 PAAGGA---WTTALCDCADDCNTCCMACWCPCIPVGQIAEIVDRGSSSCALNAVLYCLVF 100
Query: 94 -CASGM-GCLYSCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGI 151
++GM +YSC YR+++RA +DL E C D LV FCC+ C++ Q +RELKNRG D +
Sbjct: 101 HVSAGMCQWVYSCAYRARLRAAYDLPETPCSDCLVTFCCQTCSIAQMHRELKNRGHDPNL 160
Query: 152 GWAANVDR 159
GW N R
Sbjct: 161 GWEVNSRR 168
>Os03g0829900
Length = 136
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 44 WSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYALL-CASGMGCLY 102
WS+GLF C +D C +T VCPCITFG+ A+IV +G C A+G LL + CLY
Sbjct: 9 WSSGLFACFNDCEVCCLTTVCPCITFGRSAEIVSRGERTCCAAGVMCVLLGFFAHCHCLY 68
Query: 103 SCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAAN 156
SC YR KMR F L E C D VH C CALCQEYR LK+ G+ +GW N
Sbjct: 69 SCCYRGKMRDSFHLPEDPCCDCCVHALCLQCALCQEYRHLKSLGYKPSLGWLGN 122
>Os03g0830300 Similar to Fw2.2
Length = 146
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 76/120 (63%), Gaps = 7/120 (5%)
Query: 40 GLTRWSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYALLCASGMG 99
G WSTGL C DD G C TC CPCITFG+VA+IVD+G+ G YALL G
Sbjct: 15 GSAAWSTGLCDCFDDCGLCCTTCWCPCITFGRVAEIVDRGSTSFGTGGALYALL-----G 69
Query: 100 CLYSCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVDR 159
C +C YR KMRAQ L + C D VH CCE CALCQEYREL RG+D +GW NV+R
Sbjct: 70 C--TCTYRGKMRAQHGLGDAACGDCCVHCCCESCALCQEYRELVARGYDPKLGWHLNVER 127
>Os03g0829800 Similar to Placenta-specific gene 8 protein (C15 protein)
Length = 143
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 40 GLTRWSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYALLCA-SGM 98
G WS+GL C DD G C +T CPCITFG+VA+IVD+G+ C SG Y L +G
Sbjct: 17 GSAPWSSGLCDCFDDYGLCCMTWWCPCITFGRVAEIVDRGSTSCGHSGALYVFLAVITGF 76
Query: 99 GCLYSCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVD 158
+Y R R L EYREL RG+D +GW N++
Sbjct: 77 QWMYLHLPRQDARPVRPLRRAL---------RRLLHPLLEYRELAARGYDPKLGWHLNME 127
Query: 159 RQ 160
R+
Sbjct: 128 RR 129
>Os02g0286933 Protein of unknown function Cys-rich family protein
Length = 220
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Query: 34 TPRTGGGLTRWSTGLFHCMDDPGNCL-ITCVCPCITFGQVADIVDKGTCPCLASGTAYAL 92
PR W T L C D ++ P ++ + +IVD+G Y +
Sbjct: 81 KPRMVPAHQGWQTSLCDCFGDGCESFCLSAWFPWLSISCIGEIVDQGFTEWCCICFIYLI 140
Query: 93 LCASGMGCLYSCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLG 150
G+ Y+ +YR K+RAQ+ L E PD L H C +CAL QE+REL RG+++G
Sbjct: 141 AAYFGVWWAYAGWYRGKLRAQYGLPESPLPDCLTHLFCHWCALAQEHRELAARGYNVG 198
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.142 0.492
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,268,568
Number of extensions: 307526
Number of successful extensions: 629
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 621
Number of HSP's successfully gapped: 15
Length of query: 181
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 86
Effective length of database: 12,075,471
Effective search space: 1038490506
Effective search space used: 1038490506
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 153 (63.5 bits)