Os03g0830300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fw2.2.
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Os03g0830300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fw2.2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 254.35 | 0.749 | 6.97 | 3.21 | 1.28 | 1.05 | 2.2 | -0.51 | 0.498 | 21.1 | 72.01 | 1422 | -- | -- |
| 254.46 | 0.743 | 6.97 | 3.15 | 1.28 | 1.07 | 2.15 | -- | 0.53 | 21.1 | 73 | 1430 | -- | -- |
| 271.31 | 0.767 | 6.97 | 3.12 | 1.29 | 1.04 | -- | -0.453 | 0.493 | 21 | 72.43 | 1431 | -- | -- |
| 270.9 | 0.767 | 6.97 | 3.05 | 1.27 | 1.06 | -- | -- | 0.481 | 21 | 73.56 | 1457 | -- | -- |
| 362.9 | 0.887 | 6.94 | 3.09 | -- | 1.14 | -- | -0.351 | 0.482 | -- | 74 | 1474 | -- | -- |
| 294.49 | 0.805 | 7.01 | 2.93 | 1.3 | -- | 2.1 | -- | 0.338 | 21 | -- | -- | -- | -- |
| 309.85 | 0.824 | 7.01 | 2.86 | 1.3 | -- | -- | -- | 0.336 | 21 | -- | -- | -- | -- |
| 363.18 | 0.888 | 6.94 | 3.06 | -- | 1.13 | -- | -- | 0.481 | -- | 74 | 1474 | -- | -- |
| 390.52 | 0.92 | 7.11 | -- | 1.28 | 2.3 | -- | -- | -0.0893 | 21.1 | 64.5 | 47520 | -- | -- |
| 406.29 | 0.942 | 6.98 | 2.86 | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
| 525.19 | 1.07 | 7.08 | -- | 1.29 | -- | -- | -- | 0.0181 | 21.2 | -- | -- | -- | -- |
| 485.67 | 1.03 | 7.07 | -- | -- | 2.32 | -- | -- | -0.0975 | -- | 64.19 | 47520 | -- | -- |
| 622.1 | 1.16 | 7.05 | -- | -- | -- | -- | -- | 0.0112 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 233.02 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 17 | 240.61 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 18 | 243.25 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 19 | 243.86 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 20 | 243.98 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 21 | 244.54 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 24 | 245.32 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 27 | 246.05 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 30 | 246.44 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 32 | 246.54 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 34 | 246.57 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 35 | 246.62 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 49 | 246.63 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 50 | 246.63 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 12 | 5 |
| 57 | 246.83 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 59 | 246.94 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 61 | 246.96 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 64 | 247.04 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 65 | 247.05 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 87 | 248.04 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 18 | 10 |
| 145 | 249.71 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 150 | 249.79 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 187 | 250.24 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 188 | 250.25 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 198 | 250.32 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 20 | NA |
| 199 | 250.33 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 200 | 250.33 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 221 | 250.51 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 17 | 16 |
| 281 | 250.95 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 431 | 251.62 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 447 | 251.71 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 15 | 21 |
| 461 | 251.83 | wind | 7.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 513 | 252.04 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 538 | 252.15 | wind | 7.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 566 | 252.27 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 20 |
| 574 | 252.29 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 19 | 13 |
| 602 | 252.33 | humidity | 60.0 | 43200 | < th | dose dependent | no | NA | NA |
| 603 | 252.33 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 624 | 252.52 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 632 | 252.57 | wind | 5.0 | 43200 | > th | dose dependent | sin | 11 | NA |
| 644 | 252.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 645 | 252.67 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 646 | 252.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 647 | 252.68 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 658 | 252.69 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 659 | 252.69 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 662 | 252.69 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 16 | 18 |
| 664 | 252.71 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 667 | 252.71 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 15 | 20 |
| 668 | 252.72 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 674 | 252.73 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 677 | 252.75 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 683 | 252.80 | wind | 9.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 690 | 252.89 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 694 | 252.93 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 697 | 252.98 | wind | 7.0 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 726 | 253.16 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 737 | 253.24 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 744 | 253.26 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 745 | 253.26 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 751 | 253.29 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 757 | 253.35 | humidity | 60.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 759 | 253.35 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 8 |
| 766 | 253.39 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 776 | 253.46 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 789 | 253.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 795 | 253.58 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 801 | 253.63 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 8 |
| 805 | 253.66 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 18 | 14 |
| 806 | 253.67 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 18 | 12 |
| 809 | 253.69 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 830 | 253.82 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 835 | 253.85 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 863 | 254.00 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 875 | 254.05 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 906 | 254.13 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 972 | 254.26 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 5 | 8 |