Os03g0830200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function Cys-rich family protein.
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Os03g0830200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function Cys-rich family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 224.14 | 0.703 | 7.7 | 4 | 1.49 | 1.58 | -0.0294 | -1.14 | 0.85 | 22.2 | 20.8 | 5948 | -- | -- |
| 225.97 | 0.7 | 7.64 | 4.19 | 1.48 | 1.77 | 0.0393 | -- | 0.908 | 22.1 | 20.72 | 5943 | -- | -- |
| 224.14 | 0.697 | 7.7 | 4 | 1.49 | 1.59 | -- | -1.14 | 0.849 | 22.2 | 20.81 | 5981 | -- | -- |
| 225.63 | 0.7 | 7.65 | 4.2 | 1.48 | 1.78 | -- | -- | 0.898 | 22.2 | 20.89 | 5991 | -- | -- |
| 345.33 | 0.865 | 7.64 | 4.13 | -- | 1.78 | -- | -0.88 | 0.858 | -- | 20.9 | 3677 | -- | -- |
| 288.65 | 0.796 | 7.51 | 5.43 | 1.5 | -- | 0.086 | -- | 1.48 | 22.2 | -- | -- | -- | -- |
| 288.68 | 0.796 | 7.51 | 5.43 | 1.5 | -- | -- | -- | 1.48 | 22.2 | -- | -- | -- | -- |
| 346.66 | 0.867 | 7.6 | 4.34 | -- | 1.88 | -- | -- | 0.917 | -- | 20.85 | 3675 | -- | -- |
| 271.35 | 0.767 | 7.89 | -- | 1.45 | 4.47 | -- | -- | -0.19 | 22.1 | 18.5 | 47520 | -- | -- |
| 424.62 | 0.963 | 7.47 | 5.45 | -- | -- | -- | -- | 1.48 | -- | -- | -- | -- | -- |
| 1064.82 | 1.53 | 7.65 | -- | 1.53 | -- | -- | -- | 0.877 | 22.5 | -- | -- | -- | -- |
| 398.03 | 0.929 | 7.85 | -- | -- | 4.51 | -- | -- | -0.2 | -- | 18.46 | 47520 | -- | -- |
| 1207.64 | 1.62 | 7.61 | -- | -- | -- | -- | -- | 0.88 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 216.79 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 2 | 217.19 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 3 | 217.22 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 5 | 217.42 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 7 | 217.58 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 19 | 218.40 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 20 | 218.41 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 20 | 15 |
| 48 | 219.16 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 51 | 219.23 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 11 |
| 65 | 219.47 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 78 | 219.66 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 94 | 219.96 | temperature | 20.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 110 | 220.22 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 111 | 220.22 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 128 | 220.34 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 133 | 220.37 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 135 | 220.38 | humidity | 60.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 144 | 220.45 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 1 | 6 |
| 147 | 220.46 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 164 | 220.69 | temperature | 20.0 | 4320 | < th | dose independent | sin | 10 | NA |
| 183 | 220.96 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 184 | 220.96 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 197 | 221.07 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 198 | 221.11 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 199 | 221.12 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 236 | 221.59 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 246 | 221.67 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 261 | 221.80 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 282 | 222.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 284 | 222.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 297 | 222.22 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 303 | 222.25 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 305 | 222.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 5 |
| 325 | 222.46 | humidity | 60.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 365 | 222.79 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 452 | 223.51 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 4 |
| 454 | 223.52 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 21 | 11 |
| 619 | 224.36 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 673 | 224.58 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 694 | 224.68 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 739 | 224.87 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 871 | 225.28 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 888 | 225.37 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 916 | 225.47 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 14 |
| 963 | 225.68 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 1000 | 225.79 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 2 |