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Os04g0461600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Fw2.2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9 (0.0351) R2 : 0.391
β1 : -1.62 (0.13) R2dD : 0.25 R2D : 0.0958
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.2 (0.179) R2dE : 0.206 R2E : 0.0705
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.667 (0.0758) R2dN8 : 0.13 R2N8 : -0.00973
σ : 0.655
deviance : 197.86
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 1.49
memory length : 1039
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 14.6
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
164.44 0.602 9 -1.72 1.78 -1.99 -3.19 0.604 -0.514 21.2 0.17 121 11.2 --
164.67 0.598 9 -1.69 1.77 -2 -2.69 -- -0.513 21.1 0.17 125 11.3 --
174.2 0.615 9 -1.45 2.11 -2.13 -- -2.16 -0.482 21.5 7.313 155 10.3 --
189.3 0.641 9.01 -1.57 1.75 -1.93 -- -- -0.516 21 0.2046 123 11.4 --
209.19 0.674 8.94 -1.52 -- -1.29 -- 0.686 -0.553 -- 5.65 1040 11.4 --
229.79 0.711 8.94 -1.43 0.771 -- 0.115 -- -0.448 16.8 -- -- -- --
229.79 0.71 8.94 -1.43 0.773 -- -- -- -0.447 16.9 -- -- -- --
197.86 0.655 9 -1.62 -- -2.2 -- -- -0.667 -- 1.49 1039 14.6 --
251.6 0.739 8.95 -- 1.76 -1.75 -- -- -0.321 20.9 5.17 145 10.9 --
261.24 0.755 8.93 -1.46 -- -- -- -- -0.467 -- -- -- -- --
283.71 0.788 8.91 -- 0.799 -- -- -- -0.288 16.9 -- -- -- --
255.24 0.744 8.97 -- -- -1.58 -- -- -0.535 -- 8.962 2415 10.5 --
317.37 0.832 8.9 -- -- -- -- -- -0.305 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 158.53 wind 1.0 90 > th dose dependent rect. 12 7
2 159.41 temperature 10.0 270 > th dose dependent rect. 1 15
3 159.79 atmosphere 995.0 90 > th dose dependent rect. 19 17
5 160.64 atmosphere 995.0 270 > th dose dependent rect. 17 18
6 160.69 wind 7.0 270 < th dose independent rect. 15 21
10 161.26 radiation 1.0 270 > th dose independent rect. 12 4
13 161.47 humidity 80.0 270 < th dose independent rect. 12 4
15 161.58 radiation 1.0 90 > th dose independent rect. 12 17
16 161.66 radiation 1.0 90 > th dose independent rect. 12 7
31 162.39 temperature 25.0 270 > th dose independent rect. 11 6
50 162.99 temperature 25.0 270 > th dose independent rect. 12 4
51 163.03 atmosphere 1000.0 270 > th dose independent rect. 17 18
52 163.03 temperature 15.0 270 > th dose dependent rect. 11 5
53 163.16 wind 3.0 90 > th dose independent rect. 12 7
55 163.20 wind 1.0 270 > th dose dependent rect. 12 3
56 163.20 temperature 10.0 90 > th dose dependent rect. 12 7
61 163.32 wind 1.0 270 > th dose independent rect. 17 18
63 163.33 humidity 80.0 270 < th dose independent rect. 11 6
72 163.72 wind 7.0 270 < th dose independent rect. 16 9
86 164.11 wind 9.0 270 < th dose independent rect. 4 8
87 164.19 precipitation 0.1 270 < th dose independent rect. 12 16
88 164.19 precipitation 0.1 270 < th dose dependent rect. 12 16
89 164.20 atmosphere 995.0 270 > th dose independent rect. 16 20
91 164.37 atmosphere 1010.0 270 < th dose independent rect. 11 5
93 164.45 temperature 10.0 270 > th dose dependent rect. 11 18
94 164.47 precipitation 0.1 270 < th dose independent rect. 4 8
95 164.47 precipitation 0.1 270 < th dose dependent rect. 4 8
96 164.56 temperature 10.0 270 > th dose independent rect. 4 8
97 164.56 atmosphere 995.0 270 > th dose independent rect. 4 8
98 164.56 atmosphere 1015.0 270 < th dose independent rect. 4 8
99 164.56 temperature 10.0 270 > th dose independent rect. 12 16
108 164.78 wind 1.0 270 > th dose independent rect. 12 4
113 165.09 humidity 50.0 270 > th dose independent rect. 12 4
114 165.09 wind 1.0 90 > th dose independent rect. 19 17
116 165.10 wind 9.0 90 < th dose independent rect. 19 17
118 165.16 temperature 10.0 90 > th dose independent rect. 12 7
121 165.16 temperature 10.0 90 > th dose independent rect. 19 17
122 165.16 atmosphere 995.0 90 > th dose independent rect. 19 17
133 165.31 precipitation 0.1 90 < th dose independent rect. 12 7
134 165.31 precipitation 0.1 90 < th dose dependent rect. 12 7
139 165.44 precipitation 0.1 270 < th dose independent rect. 12 4
140 165.44 precipitation 0.1 270 < th dose dependent rect. 12 4
141 165.45 temperature 10.0 270 > th dose independent rect. 12 4
144 165.45 temperature 10.0 270 > th dose independent rect. 16 20
172 166.04 atmosphere 995.0 270 > th dose independent rect. 16 9
176 166.15 precipitation 0.1 270 < th dose independent rect. 1 15
177 166.15 precipitation 0.1 270 < th dose dependent rect. 1 15
179 166.18 precipitation 0.1 270 < th dose independent rect. 11 18
180 166.18 precipitation 0.1 270 < th dose dependent rect. 11 18
196 166.44 temperature 10.0 270 > th dose independent rect. 16 9
197 166.44 radiation 40.0 270 < th dose independent rect. 16 9
198 166.44 temperature 10.0 270 > th dose independent rect. 1 15
199 166.44 atmosphere 1015.0 270 < th dose independent rect. 1 15
203 166.54 wind 9.0 270 < th dose independent rect. 12 4
206 166.55 wind 1.0 270 > th dose independent rect. 4 8
211 166.63 temperature 10.0 270 > th dose independent rect. 5 6
212 166.63 atmosphere 995.0 270 > th dose independent rect. 5 6
213 166.63 atmosphere 1015.0 270 < th dose independent rect. 5 6
214 166.63 precipitation 0.1 270 < th dose independent rect. 5 6
215 166.63 temperature 10.0 270 > th dose independent rect. 11 18
217 166.63 precipitation 0.1 270 < th dose dependent rect. 5 6
228 166.71 wind 9.0 90 < th dose independent rect. 12 7
247 166.94 atmosphere 995.0 270 > th dose independent rect. 12 3
264 167.19 temperature 30.0 270 < th dose independent rect. 5 6
272 167.25 radiation 40.0 270 < th dose dependent rect. 15 10
281 167.31 precipitation 0.1 90 < th dose independent rect. 19 17
284 167.31 precipitation 0.1 90 < th dose dependent rect. 19 17
302 167.57 precipitation 0.1 270 < th dose independent rect. 16 20
303 167.57 precipitation 0.1 270 < th dose dependent rect. 16 20
316 167.69 wind 1.0 270 > th dose independent rect. 16 9
321 167.72 humidity 50.0 270 > th dose independent rect. 5 6
329 167.80 temperature 10.0 270 > th dose independent rect. 17 18
364 168.20 humidity 50.0 270 > th dose independent rect. 4 8
375 168.31 wind 9.0 270 < th dose independent rect. 12 16
407 168.43 radiation 40.0 30 < th dose independent rect. 12 7
439 168.64 wind 9.0 270 < th dose independent rect. 1 15
450 168.90 precipitation 0.1 270 < th dose independent rect. 17 18
453 168.90 precipitation 0.1 270 < th dose dependent rect. 17 18
454 168.91 humidity 50.0 270 > th dose independent rect. 1 15
482 169.18 humidity 50.0 270 > th dose independent rect. 17 18
490 169.25 radiation 1.0 90 < th dose dependent sin 16 NA
498 169.33 atmosphere 1015.0 90 < th dose dependent rect. 13 16
502 169.38 atmosphere 995.0 90 > th dose independent rect. 12 7
518 169.47 precipitation 0.1 270 < th dose independent rect. 16 9
519 169.47 precipitation 0.1 270 < th dose dependent rect. 16 9
569 169.78 temperature 10.0 1440 > th dose independent rect. 13 7
573 169.78 temperature 10.0 1440 > th dose independent rect. 20 17
576 169.78 atmosphere 995.0 1440 > th dose independent rect. 20 17
577 169.78 temperature 10.0 10 > th dose dependent rect. 13 17
592 169.98 radiation 1.0 270 > th dose dependent rect. 12 4
598 170.03 temperature 30.0 90 < th dose independent rect. 19 17
624 170.22 atmosphere 995.0 270 > th dose independent rect. 1 15
626 170.27 atmosphere 1015.0 10 < th dose dependent rect. 13 17
660 170.46 atmosphere 1015.0 270 < th dose independent rect. 12 16
697 170.67 radiation 1.0 90 > th dose independent sin 16 NA
703 170.71 humidity 50.0 30 > th dose independent rect. 12 7
725 170.87 humidity 50.0 270 > th dose independent rect. 12 17
728 170.89 atmosphere 1015.0 270 < th dose independent rect. 11 18
747 171.02 radiation 1.0 90 < th dose dependent rect. 14 13
772 171.11 atmosphere 1015.0 90 < th dose independent rect. 19 17
790 171.22 humidity 50.0 90 > th dose independent rect. 19 17
819 171.32 radiation 1.0 90 < th dose dependent rect. 7 20
824 171.34 radiation 1.0 270 < th dose dependent sin 20 NA
828 171.36 radiation 40.0 14400 < th dose dependent rect. 19 10
846 171.48 radiation 1.0 90 < th dose dependent rect. 10 17
870 171.72 radiation 1.0 90 > th dose independent rect. 6 7
872 171.72 atmosphere 995.0 270 > th dose dependent rect. 16 9
887 171.83 radiation 1.0 90 < th dose independent sin 16 NA
920 172.06 temperature 30.0 270 < th dose independent rect. 17 18
925 172.08 wind 9.0 270 < th dose dependent rect. 5 7
935 172.16 radiation 1.0 270 > th dose independent rect. 18 17
936 172.16 radiation 10.0 4320 < th dose dependent rect. 19 10
952 172.21 atmosphere 995.0 30 > th dose dependent rect. 19 8
959 172.24 temperature 10.0 30 > th dose dependent rect. 3 16
972 172.31 atmosphere 995.0 270 > th dose independent rect. 12 16
984 172.36 atmosphere 1015.0 90 < th dose dependent rect. 12 7
995 172.45 radiation 40.0 30 < th dose independent rect. 12 18