BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0461600 Os04g0461600|AK072586
(179 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0461600 Similar to Fw2.2 372 e-103
Os02g0579800 Similar to Fw2.2 184 4e-47
Os06g0266300 149 1e-36
Os03g0830200 Protein of unknown function Cys-rich family pr... 148 2e-36
Os03g0830500 Similar to PGPS/D12 145 1e-35
Os02g0763000 Protein of unknown function Cys-rich family pr... 140 7e-34
Os02g0580000 Protein of unknown function Cys-rich family pr... 139 8e-34
Os03g0829900 132 2e-31
Os10g0112100 Protein of unknown function Cys-rich family pr... 121 2e-28
Os03g0830300 Similar to Fw2.2 107 4e-24
Os03g0829800 Similar to Placenta-specific gene 8 protein (C... 103 6e-23
Os02g0286933 Protein of unknown function Cys-rich family pr... 83 9e-17
>Os04g0461600 Similar to Fw2.2
Length = 179
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 SPTDERFLHFTERVRAAASHPRESIDDPWPAATRREANNPPVASWSSGLCDCYDDVGGCC 60
SPTDERFLHFTERVRAAASHPRESIDDPWPAATRREANNPPVASWSSGLCDCYDDVGGCC
Sbjct: 1 SPTDERFLHFTERVRAAASHPRESIDDPWPAATRREANNPPVASWSSGLCDCYDDVGGCC 60
Query: 61 LTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMATGFACAYSCCYRSRLHQQYGLQE 120
LTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMATGFACAYSCCYRSRLHQQYGLQE
Sbjct: 61 LTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMATGFACAYSCCYRSRLHQQYGLQE 120
Query: 121 KPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQGNMERMGKGVATAPPQMHPGMTR 179
KPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQGNMERMGKGVATAPPQMHPGMTR
Sbjct: 121 KPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQGNMERMGKGVATAPPQMHPGMTR 179
>Os02g0579800 Similar to Fw2.2
Length = 162
Score = 184 bits (466), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 105/140 (75%), Gaps = 1/140 (0%)
Query: 41 PVASWSSGLCDCYDDVGGCCLTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMATGF 100
P+A+WS+GL +C+DD G CC+T CPC+ FG+IAEI+D+G++SC G LY L+ + TG
Sbjct: 23 PLAAWSTGLFNCFDDCGNCCVTCLCPCITFGQIAEIIDRGSSSCGTSGALYALVMLLTGC 82
Query: 101 ACAYSCCYRSRLHQQYGLQEKPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQGNME 160
C YSC YR+++ QYGLQEKPC DC VH+ C PCAL QEYRELK RGFDM+LGW NME
Sbjct: 83 NCVYSCFYRAKMRSQYGLQEKPCADCPVHFFCEPCALSQEYRELKKRGFDMNLGWHANME 142
Query: 161 RMG-KGVATAPPQMHPGMTR 179
R G K T PP M PGMTR
Sbjct: 143 RQGHKPAMTMPPHMFPGMTR 162
>Os06g0266300
Length = 417
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 91/135 (67%), Gaps = 1/135 (0%)
Query: 38 NNPPVASWSSGLCDCYDDVGGCCLTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMA 97
N WS L DC+ D G CCLT +CPC+ FGRIAEIVD+G+TSCC GTLY+LLA
Sbjct: 148 TNSMSGEWSVKLFDCFGDSGTCCLTCWCPCITFGRIAEIVDKGSTSCCMHGTLYVLLA-T 206
Query: 98 TGFACAYSCCYRSRLHQQYGLQEKPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQG 157
G Y+C RS + QY LQ+ PC DCCVH+ C CALCQEY+EL+ RGF+MS GW+G
Sbjct: 207 IGCQWLYACTKRSSMRAQYNLQQSPCLDCCVHFFCDSCALCQEYKELEKRGFNMSKGWEG 266
Query: 158 NMERMGKGVATAPPQ 172
+ + +G PP+
Sbjct: 267 SNKMVGCVQGMKPPR 281
>Os03g0830200 Protein of unknown function Cys-rich family protein
Length = 150
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 89/129 (68%)
Query: 30 PAATRREANNPPVASWSSGLCDCYDDVGGCCLTFFCPCVAFGRIAEIVDQGATSCCARGT 89
P+A A+WS+GLCDC+DD G CCLT +CPC+ FGR+AE+VD+G+TSC G
Sbjct: 4 PSAAPVTGVPVGSAAWSTGLCDCFDDCGLCCLTCWCPCITFGRVAEMVDRGSTSCGTGGA 63
Query: 90 LYMLLAMATGFACAYSCCYRSRLHQQYGLQEKPCGDCCVHWCCGPCALCQEYRELKSRGF 149
LY LL TG YSC YR ++ QYGL E C DCCVH+CC PCALCQEYREL +RG+
Sbjct: 64 LYGLLCAFTGCQWIYSCTYRGKMRTQYGLAEAGCADCCVHFCCEPCALCQEYRELVARGY 123
Query: 150 DMSLGWQGN 158
D LGW N
Sbjct: 124 DPKLGWHLN 132
>Os03g0830500 Similar to PGPS/D12
Length = 141
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
Query: 39 NPPVASWSSGLCDCYDDVGGCCLTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMAT 98
P A+WS+GL DC+DD G CC+T +CPC+ FGR+AE+VD+G+TSC G LY LLA T
Sbjct: 3 KPSAAAWSTGLLDCFDDCGLCCMTCWCPCITFGRVAEMVDRGSTSCGTSGALYALLATVT 62
Query: 99 GFACAYSCCYRSRLHQQYGL-QEKPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQG 157
G YSC YR ++ QYGL + C DCCVH+ C CALCQEYREL +RG+D LGW
Sbjct: 63 GCQFVYSCVYRGKMRAQYGLGDDAACADCCVHFWCNKCALCQEYRELVARGYDPKLGWDL 122
Query: 158 NMER 161
N++R
Sbjct: 123 NVQR 126
>Os02g0763000 Protein of unknown function Cys-rich family protein
Length = 181
Score = 140 bits (352), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 42 VASWSSGLCDCYDDVGGCCLTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMATGFA 101
+ WS+GL C DD G C +T CPC+ FG++A+IVD+G C A GT Y LL A+G
Sbjct: 41 LTRWSTGLFHCMDDPGNCLITCVCPCITFGQVADIVDKGTCPCLASGTAYALLC-ASGMG 99
Query: 102 CAYSCCYRSRLHQQYGLQEKPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQGNMER 161
C YSC YRS++ Q+ L E C D VH+CC CALCQEYRELK+RGFD+ +GW N++R
Sbjct: 100 CLYSCFYRSKMRAQFDLDEGDCPDFLVHFCCEYCALCQEYRELKNRGFDLGIGWAANVDR 159
Query: 162 MGKGVATAPPQMHPGM 177
+GV A PG+
Sbjct: 160 QRRGVTGASVMGAPGV 175
>Os02g0580000 Protein of unknown function Cys-rich family protein
Length = 136
Score = 139 bits (351), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 84/110 (76%)
Query: 45 WSSGLCDCYDDVGGCCLTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMATGFACAY 104
WS+ L DC+DD C +T+ CPC+ FG+IAEIVD+G++SC G+LY L+ + TG +C Y
Sbjct: 10 WSTDLFDCFDDSSNCFMTWLCPCITFGQIAEIVDRGSSSCGTSGSLYALVFLVTGCSCIY 69
Query: 105 SCCYRSRLHQQYGLQEKPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLG 154
SC YRS+L QYGLQE PC DC VH C PCALCQEYRELK RGFDMSLG
Sbjct: 70 SCIYRSKLRSQYGLQETPCPDCLVHLWCEPCALCQEYRELKKRGFDMSLG 119
>Os03g0829900
Length = 136
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
Query: 40 PPVASWSSGLCDCYDDVGGCCLTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMATG 99
P WSSGL C++D CCLT CPC+ FGR AEIV +G +CCA G + +LL
Sbjct: 4 PQHNDWSSGLFACFNDCEVCCLTTVCPCITFGRSAEIVSRGERTCCAAGVMCVLLGFFAH 63
Query: 100 FACAYSCCYRSRLHQQYGLQEKPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQGNM 159
C YSCCYR ++ + L E PC DCCVH C CALCQEYR LKS G+ SLGW GN
Sbjct: 64 CHCLYSCCYRGKMRDSFHLPEDPCCDCCVHALCLQCALCQEYRHLKSLGYKPSLGWLGNN 123
Query: 160 ERMGKGVATAPPQMHPGMTR 179
+ + PP+ +P M R
Sbjct: 124 QHV-------PPKHNPPMRR 136
>Os10g0112100 Protein of unknown function Cys-rich family protein
Length = 186
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 80/131 (61%), Gaps = 6/131 (4%)
Query: 44 SWSSGLCDCYDDVGGCCLTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMATGFAC- 102
+W++ LCDC DD CC+ +CPC+ G+IAEIVD+G++SC LY L+ + C
Sbjct: 49 AWTTALCDCADDCNTCCMACWCPCIPVGQIAEIVDRGSSSCALNAVLYCLVFHVSAGMCQ 108
Query: 103 -AYSCCYRSRLHQQYGLQEKPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQGNMER 161
YSC YR+RL Y L E PC DC V +CC C++ Q +RELK+RG D +LGW+ N R
Sbjct: 109 WVYSCAYRARLRAAYDLPETPCSDCLVTFCCQTCSIAQMHRELKNRGHDPNLGWEVNSRR 168
Query: 162 MGKGVATAPPQ 172
PPQ
Sbjct: 169 ----TMMTPPQ 175
>Os03g0830300 Similar to Fw2.2
Length = 146
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 83/119 (69%), Gaps = 8/119 (6%)
Query: 43 ASWSSGLCDCYDDVGGCCLTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMATGFAC 102
A+WS+GLCDC+DD G CC T +CPC+ FGR+AEIVD+G+TS G LY LL
Sbjct: 17 AAWSTGLCDCFDDCGLCCTTCWCPCITFGRVAEIVDRGSTSFGTGGALYALLGC------ 70
Query: 103 AYSCCYRSRLHQQYGLQEKPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQGNMER 161
+C YR ++ Q+GL + CGDCCVH CC CALCQEYREL +RG+D LGW N+ER
Sbjct: 71 --TCTYRGKMRAQHGLGDAACGDCCVHCCCESCALCQEYRELVARGYDPKLGWHLNVER 127
>Os03g0829800 Similar to Placenta-specific gene 8 protein (C15 protein)
Length = 143
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query: 43 ASWSSGLCDCYDDVGGCCLTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAMATGFAC 102
A WSSGLCDC+DD G CC+T++CPC+ FGR+AEIVD+G+TSC G LY+ LA+ TGF
Sbjct: 19 APWSSGLCDCFDDYGLCCMTWWCPCITFGRVAEIVDRGSTSCGHSGALYVFLAVITGFQW 78
Query: 103 AYSCCYRSRLHQQYGLQEKPCGDCCVHWCCGPCALCQEYRELKSRGFDMSLGWQGNMER 161
Y R +P EYREL +RG+D LGW NMER
Sbjct: 79 MYLHLPRQ--------DARPVRPLRRA-LRRLLHPLLEYRELAARGYDPKLGWHLNMER 128
>Os02g0286933 Protein of unknown function Cys-rich family protein
Length = 220
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Query: 40 PPVASWSSGLCDCYDDVGGC---CLTFFCPCVAFGRIAEIVDQGATSCCARGTLYMLLAM 96
P W + LCDC+ D GC CL+ + P ++ I EIVDQG T C +Y L+A
Sbjct: 86 PAHQGWQTSLCDCFGD--GCESFCLSAWFPWLSISCIGEIVDQGFTEWCCICFIY-LIAA 142
Query: 97 ATGFACAYSCCYRSRLHQQYGLQEKPCGDCCVHWCCGPCALCQEYRELKSRGFDM 151
G AY+ YR +L QYGL E P DC H C CAL QE+REL +RG+++
Sbjct: 143 YFGVWWAYAGWYRGKLRAQYGLPESPLPDCLTHLFCHWCALAQEHRELAARGYNV 197
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.138 0.493
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,400,218
Number of extensions: 316049
Number of successful extensions: 1047
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 1034
Number of HSP's successfully gapped: 16
Length of query: 179
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 85
Effective length of database: 12,127,685
Effective search space: 1030853225
Effective search space used: 1030853225
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 153 (63.5 bits)