Os10g0112100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function Cys-rich family protein.
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Os10g0112100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function Cys-rich family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 176.61 | 0.624 | 6.27 | 4.21 | 0.541 | -1.78 | -2.15 | 1.71 | 1.53 | 8.54 | 19.48 | 80 | -- | -- |
| 178.86 | 0.623 | 6.31 | 3.94 | 0.585 | -1.65 | -1.93 | -- | 1.44 | 8.05 | 19.55 | 60 | -- | -- |
| 188.66 | 0.64 | 6.29 | 3.94 | 0.646 | -1.5 | -- | 0.933 | 1.44 | 7.08 | 19.7 | 59 | -- | -- |
| 189.54 | 0.641 | 6.32 | 3.78 | 0.66 | -1.39 | -- | -- | 1.39 | 6.93 | 19.8 | 57 | -- | -- |
| 199.03 | 0.657 | 6.25 | 4.45 | -- | -1.83 | -- | 3.28 | 1.6 | -- | 21.33 | 335 | -- | -- |
| 220.11 | 0.696 | 6.37 | 3.45 | 1.02 | -- | -0.592 | -- | 1.14 | 5.44 | -- | -- | -- | -- |
| 220.69 | 0.696 | 6.37 | 3.45 | 1.01 | -- | -- | -- | 1.15 | 5.19 | -- | -- | -- | -- |
| 204.72 | 0.666 | 6.32 | 3.85 | -- | -1.69 | -- | -- | 1.45 | -- | 19.98 | 205 | -- | -- |
| 534.26 | 1.08 | 6.45 | -- | 1.04 | -0.14 | -- | -- | 0.783 | 5.19 | 19.8 | 57 | -- | -- |
| 274.41 | 0.774 | 6.38 | 3.49 | -- | -- | -- | -- | 1.17 | -- | -- | -- | -- | -- |
| 534.58 | 1.08 | 6.46 | -- | 1.07 | -- | -- | -- | 0.762 | 5.07 | -- | -- | -- | -- |
| 566.45 | 1.11 | 6.46 | -- | -- | -0.994 | -- | -- | 0.854 | -- | 24.51 | 254 | -- | -- |
| 595.08 | 1.14 | 6.47 | -- | -- | -- | -- | -- | 0.785 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 171.27 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 2 | 171.95 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 4 | 172.88 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 8 | 173.18 | humidity | 90.0 | 720 | < th | dose independent | rect. | 6 | 14 |
| 11 | 173.29 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 15 | 20 |
| 12 | 173.39 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 14 | 22 |
| 17 | 173.56 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 24 | 173.92 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 50 | 174.70 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 58 | 174.91 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 59 | 174.92 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 62 | 174.95 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 6 | 13 |
| 67 | 175.09 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 70 | 175.18 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 72 | 175.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 75 | 175.34 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 14 | 3 |
| 80 | 175.46 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 21 |
| 88 | 175.65 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 24 | 19 |
| 91 | 175.70 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 99 | 175.80 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 15 | 13 |
| 104 | 175.88 | humidity | 90.0 | 720 | < th | dose independent | sin | 23 | NA |
| 171 | 176.49 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 172 | 176.49 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 15 | 13 |
| 173 | 176.50 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 191 | 176.70 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 198 | 176.73 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 209 | 176.80 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 218 | 176.83 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 220 | 176.86 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 231 | 176.92 | temperature | 20.0 | 90 | > th | dose dependent | no | NA | NA |
| 233 | 176.94 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 250 | 177.03 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 10 |
| 258 | 177.08 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 260 | 177.08 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 262 | 177.08 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 263 | 177.08 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 274 | 177.15 | wind | 5.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 278 | 177.18 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 279 | 177.18 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 281 | 177.19 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 10 |
| 287 | 177.23 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 294 | 177.27 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 300 | 177.31 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 334 | 177.50 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 338 | 177.53 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 366 | 177.67 | humidity | 70.0 | 270 | > th | dose dependent | no | NA | NA |
| 372 | 177.68 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 392 | 177.82 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 405 | 177.89 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 408 | 177.90 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 417 | 177.96 | humidity | 60.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 421 | 177.96 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 434 | 177.97 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 442 | 178.00 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 452 | 178.02 | temperature | 15.0 | 720 | > th | dose dependent | sin | 0 | NA |
| 461 | 178.06 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 471 | 178.08 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 489 | 178.13 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 495 | 178.16 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 512 | 178.23 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 522 | 178.28 | humidity | 60.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 525 | 178.29 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 529 | 178.29 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 531 | 178.31 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 4 | 17 |
| 540 | 178.35 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 551 | 178.39 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 559 | 178.42 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 573 | 178.47 | humidity | 60.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 583 | 178.50 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 22 | 21 |
| 587 | 178.52 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 607 | 178.56 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 24 | 22 |
| 608 | 178.56 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 610 | 178.57 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 7 | 22 |
| 621 | 178.60 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 14 |
| 629 | 178.61 | humidity | 60.0 | 43200 | < th | dose independent | no | NA | NA |
| 634 | 178.62 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 651 | 178.67 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 710 | 178.82 | wind | 9.0 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 722 | 178.84 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 10 | 20 |
| 731 | 178.86 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 740 | 178.88 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 755 | 178.93 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 830 | 179.10 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 16 | 9 |
| 853 | 179.14 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 19 | 3 |
| 868 | 179.15 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 16 | 18 |
| 905 | 179.24 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 22 | 23 |
| 922 | 179.29 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |