Os01g0267400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function Cys-rich family protein.
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Os01g0267400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function Cys-rich family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.77 | 0.285 | 8.37 | 0.00077 | 0.487 | -0.593 | 0.11 | -1.1 | -0.58 | 23.9 | 0.1559 | 6331 | -- | -- |
| 38.36 | 0.288 | 8.37 | -0.0515 | 0.462 | -0.631 | 0.119 | -- | -0.588 | 23.8 | 1.744e-05 | 6300 | -- | -- |
| 36.82 | 0.283 | 8.37 | -0.00411 | 0.486 | -0.591 | -- | -1.09 | -0.58 | 24 | 0.1748 | 6330 | -- | -- |
| 38.34 | 0.288 | 8.37 | -0.0825 | 0.481 | -0.627 | -- | -- | -0.597 | 24 | 0.4926 | 6300 | -- | -- |
| 51.23 | 0.333 | 8.36 | 0.00548 | -- | -0.546 | -- | -1.07 | -0.578 | -- | 0.2401 | 6919 | -- | -- |
| 46.13 | 0.318 | 8.34 | -0.151 | 0.49 | -- | 0.0586 | -- | -0.508 | 24 | -- | -- | -- | -- |
| 46.15 | 0.318 | 8.35 | -0.154 | 0.49 | -- | -- | -- | -0.508 | 0.0158 | -- | -- | -- | -- |
| 52.97 | 0.339 | 8.36 | -0.071 | -- | -0.641 | -- | -- | -0.598 | -- | 0.4993 | 6300 | -- | -- |
| 38.52 | 0.289 | 8.37 | -- | 0.483 | -0.621 | -- | -- | -0.592 | 23.9 | 0.4968 | 6300 | -- | -- |
| 61.26 | 0.366 | 8.33 | -0.139 | -- | -- | -- | -- | -0.502 | -- | -- | -- | -- | -- |
| 46.77 | 0.32 | 8.34 | -- | 0.488 | -- | -- | -- | -0.491 | 24 | -- | -- | -- | -- |
| 53.08 | 0.339 | 8.35 | -- | -- | -0.652 | -- | -- | -0.584 | -- | 0.4989 | 6298 | -- | -- |
| 61.76 | 0.367 | 8.33 | -- | -- | -- | -- | -- | -0.486 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.78 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 2 | 36.03 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 4 | 36.11 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 5 | 36.11 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 11 | 36.21 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 15 | 36.26 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 20 | 36.35 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 33 | 36.57 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 35 | 36.59 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 7 | 12 |
| 40 | 36.61 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 44 | 36.62 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 82 | 36.79 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 91 | 36.83 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 100 | 36.85 | humidity | 80.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 101 | 36.85 | humidity | 80.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 153 | 36.97 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 161 | 36.99 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 211 | 37.08 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 11 |
| 216 | 37.08 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 11 |
| 217 | 37.09 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 11 |
| 266 | 37.15 | humidity | 70.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 278 | 37.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 288 | 37.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 8 |
| 292 | 37.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 318 | 37.21 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 18 | NA |
| 323 | 37.21 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 18 | NA |
| 326 | 37.22 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 18 | NA |
| 385 | 37.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 390 | 37.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 9 |
| 396 | 37.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 509 | 37.35 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 618 | 37.43 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 668 | 37.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 691 | 37.47 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 720 | 37.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 15 |
| 726 | 37.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 807 | 37.54 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 19 |
| 867 | 37.58 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 892 | 37.59 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 986 | 37.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 22 |