BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0530300 Os02g0530300|AK063708
(154 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0530300 Zinc finger, A20-type domain containing protein 184 2e-47
Os07g0168800 Zinc finger, A20-type domain containing protein 105 1e-23
Os01g0765900 105 2e-23
Os03g0792900 Similar to PVPR3 protein 102 1e-22
Os09g0486500 Multiple stress-responsive zinc-finger protein... 89 1e-18
Os03g0793000 Zinc finger, A20-type domain containing protein 86 1e-17
Os02g0195600 Zinc finger, A20-type domain containing protein 85 2e-17
Os03g0793300 Similar to Expressed protein (Zinc finger-like... 85 2e-17
Os06g0612800 Similar to PVPR3 protein 84 4e-17
Os08g0504700 Similar to Multiple stress-responsive zinc-fin... 83 1e-16
Os01g0718000 Zinc finger, A20-type domain containing protein 82 1e-16
Os05g0299700 Similar to Expressed protein (Zinc finger-like... 80 6e-16
Os08g0436400 77 4e-15
Os07g0169500 77 6e-15
>Os02g0530300 Zinc finger, A20-type domain containing protein
Length = 154
Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/154 (64%), Positives = 100/154 (64%)
Query: 1 MAEEQRWQEGCHRLCANNCGFFGSPATLDLCSKCYRDRQGREXXXXXXXXXXXXXXXXXX 60
MAEEQRWQEGCHRLCANNCGFFGSPATLDLCSKCYRDRQGRE
Sbjct: 1 MAEEQRWQEGCHRLCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATH 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRKRVGLTGFACRCGGTFCGAHRY 120
CRKRVGLTGFACRCGGTFCGAHRY
Sbjct: 61 PSSPSSSSCPAFLPSSTAAEAGVVVAAVAKASRCASCRKRVGLTGFACRCGGTFCGAHRY 120
Query: 121 PERHACGFDFKAAGRDAIARANPLIKGDKLKDKI 154
PERHACGFDFKAAGRDAIARANPLIKGDKLKDKI
Sbjct: 121 PERHACGFDFKAAGRDAIARANPLIKGDKLKDKI 154
>Os07g0168800 Zinc finger, A20-type domain containing protein
Length = 161
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 65/149 (43%)
Query: 2 AEEQRWQEGCHRLCANNCGFFGSPATLDLCSKCYRDRQGREXXXXXXXXXXXXXXXXXXX 61
+EE LC NNCGFFGS T ++CSKCYRD
Sbjct: 10 SEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKKAFTPASSSK 69
Query: 62 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRKRVGLTGFACRCGGTFCGAHRYP 121
CRK+VGLTGF CRCGGTFC HRY
Sbjct: 70 TPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYT 129
Query: 122 ERHACGFDFKAAGRDAIARANPLIKGDKL 150
E H C FD+K AGRD IA+ NP++ +K+
Sbjct: 130 EAHDCTFDYKKAGRDQIAKQNPVVIAEKI 158
>Os01g0765900
Length = 165
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 52/58 (89%)
Query: 97 CRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKLKDKI 154
C+K+VGL GFACRCG T+CG HRYPE+HACGFDFK A RDAIARANPLIKG+KL +KI
Sbjct: 108 CKKKVGLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKLTNKI 165
>Os03g0792900 Similar to PVPR3 protein
Length = 160
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 14 LCANNCGFFGSPATLDLCSKCYRDRQGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 73
LC NNCGFFGS T ++CSKCYRD +
Sbjct: 23 LCVNNCGFFGSRMTENMCSKCYRDTV--KAKTVATVVEKKPLASLSSTPLVTEVTDGGSG 80
Query: 74 XXXXXXXXXXXXXXXXXXXXXXXCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAA 133
CRK+VGLTGF CRCGGTFC HRY + H C FD+K
Sbjct: 81 SVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQV 140
Query: 134 GRDAIARANPLIKGDKL 150
GR+ IA+ NPL+K DK+
Sbjct: 141 GREQIAKQNPLVKADKI 157
>Os09g0486500 Multiple stress-responsive zinc-finger protein ISAP1 (Stress-
associated protein 1) (OsISAP1)
Length = 164
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Query: 14 LCANNCGFFGSPATLDLCSKCYRDRQGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 73
LCAN+CGF G+PAT +LC C+
Sbjct: 21 LCANSCGFPGNPATQNLCQNCFLAATASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPP 80
Query: 74 XXXXXXXXXXXXXXXXXXXXXXX----CRKRVGLTGFACRCGGTFCGAHRYPERHACGFD 129
CRKRVGLTGF CRCG FCG HRY +RH C +D
Sbjct: 81 PVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYD 140
Query: 130 FKAAGRDAIARANPLIKGDKL 150
+K+A RDAIAR NP+++ K+
Sbjct: 141 YKSAARDAIARDNPVVRAAKI 161
>Os03g0793000 Zinc finger, A20-type domain containing protein
Length = 169
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 97 CRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKLKDKI 154
CRK+VGLTGF CRCGG FCG HR+ + H CGFD+K+AG++ IA+ NPL+ DKL +I
Sbjct: 112 CRKKVGLTGFKCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAKQNPLVVADKLATRI 169
>Os02g0195600 Zinc finger, A20-type domain containing protein
Length = 173
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Query: 97 CRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKLKDKI 154
CRKRVGLTGF CRCG +C HRY ++H C FD++ A RDAIA+ANP++K +KL DKI
Sbjct: 117 CRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKL-DKI 173
>Os03g0793300 Similar to Expressed protein (Zinc finger-like protein)
Length = 237
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 47/58 (81%)
Query: 97 CRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKLKDKI 154
CR++VGLTGF CRCGGTFCG HRY + H CGFD+K++GR+ IA+ NP++ DKL +I
Sbjct: 180 CRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKLAFRI 237
>Os06g0612800 Similar to PVPR3 protein
Length = 171
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Query: 97 CRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKLKDKI 154
CRKRVGLTGF CRCG +C HRY ++H C FD++ A RDAIA+ANP++K +KL DKI
Sbjct: 115 CRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKL-DKI 171
>Os08g0504700 Similar to Multiple stress-responsive zinc-finger protein ISAP1
(Stress- associated protein 1) (OsISAP1)
Length = 170
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 97 CRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKL 150
CR+RVGLTGF CRCG +CGAHRY +RH C FD+K+A RDAIAR NP+++ K+
Sbjct: 114 CRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKI 167
>Os01g0718000 Zinc finger, A20-type domain containing protein
Length = 148
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 97 CRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKLK 151
C + VGL GF CRCG FCGAHRY +RH CG+D++ AGRDAIARANP+++ DK++
Sbjct: 92 CGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVE 146
>Os05g0299700 Similar to Expressed protein (Zinc finger-like protein)
Length = 174
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 41/54 (75%)
Query: 97 CRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKL 150
CRKRVGLTGF CRCG FC HR+ E H C FD+K AGR+ IARANP+I+ K+
Sbjct: 118 CRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKI 171
>Os08g0436400
Length = 224
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 97 CRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKL 150
CRK+VGL GF CRCGGTFC HR+ ++HAC FDFK + R+ IA+ NPLI K+
Sbjct: 168 CRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLIVAPKI 221
>Os07g0169500
Length = 152
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Query: 21 FFGSPATLDLCSKCYRDRQG--REXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 78
FFGS AT LCSKCY+ +Q R
Sbjct: 24 FFGSAATDGLCSKCYKQQQPQPRHLIGTAAGDSDKTSLKVVADLSTLVIKDNSGVGGEGT 83
Query: 79 XXXXXXXXXXXXXXXXXXCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAI 138
CRK+VGL GF CRCGG FCGA HAC FD+KAAGR+AI
Sbjct: 84 TVMAPPATVTKAKNRCKACRKKVGLLGFPCRCGGMFCGA------HACAFDYKAAGREAI 137
Query: 139 ARANPLIKGDKL 150
AR NPL+ K+
Sbjct: 138 ARHNPLVVAPKI 149
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.328 0.142 0.497
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,340,317
Number of extensions: 132249
Number of successful extensions: 330
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 329
Number of HSP's successfully gapped: 15
Length of query: 154
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 62
Effective length of database: 12,232,113
Effective search space: 758391006
Effective search space used: 758391006
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 151 (62.8 bits)