BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0892600 Os01g0892600|AK104609
         (396 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0892600  Pectinacetylesterase family protein                 770   0.0  
Os01g0974500  Pectinacetylesterase family protein                 411   e-115
Os07g0634600  Similar to Pectin acetylesterase (Fragment)         376   e-104
Os02g0702400  Pectinacetylesterase family protein                 367   e-102
Os04g0602500  Similar to Pectin acetylesterase                    354   5e-98
Os01g0319000  Similar to Pectin acetylesterase (Fragment)         339   2e-93
Os01g0892400  Pectinacetylesterase family protein                 209   4e-54
Os10g0550500  Similar to Pectinacetylesterase                     205   4e-53
Os05g0111900  Similar to Pectinacetylesterase precursor           180   2e-45
Os01g0892500  Pectinacetylesterase family protein                 140   2e-33
>Os01g0892600 Pectinacetylesterase family protein
          Length = 396

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/396 (94%), Positives = 373/396 (94%)

Query: 1   MAATSGKLRPPFRXXXXXXXXXVARSVDGVELTLLTGAREKGAVCLDGSPPGYHLQRGFG 60
           MAATSGKLRPPFR         VARSVDGVELTLLTGAREKGAVCLDGSPPGYHLQRGFG
Sbjct: 1   MAATSGKLRPPFRLLLLLLAAAVARSVDGVELTLLTGAREKGAVCLDGSPPGYHLQRGFG 60

Query: 61  SGEHSWFIHLQGGAWCNTIEDCSKRKMSAYGSSKFMRAVEFNGILSNDQQLNSDFYNWNR 120
           SGEHSWFIHLQGGAWCNTIEDCSKRKMSAYGSSKFMRAVEFNGILSNDQQLNSDFYNWNR
Sbjct: 61  SGEHSWFIHLQGGAWCNTIEDCSKRKMSAYGSSKFMRAVEFNGILSNDQQLNSDFYNWNR 120

Query: 121 VFIRYCDGASFSGDGEAQDQDGSTLHFRGLRIWEAVINELMGKGLATAKQAILSGCSAGG 180
           VFIRYCDGASFSGDGEAQDQDGSTLHFRGLRIWEAVINELMGKGLATAKQAILSGCSAGG
Sbjct: 121 VFIRYCDGASFSGDGEAQDQDGSTLHFRGLRIWEAVINELMGKGLATAKQAILSGCSAGG 180

Query: 181 LAALLHCNDFYARFSKEVSAKCLPDAGFFLDIEDLSGERHMWSVFNGTVHLQNVTQVLSK 240
           LAALLHCNDFYARFSKEVSAKCLPDAGFFLDIEDLSGERHMWSVFNGTVHLQNVTQVLSK
Sbjct: 181 LAALLHCNDFYARFSKEVSAKCLPDAGFFLDIEDLSGERHMWSVFNGTVHLQNVTQVLSK 240

Query: 241 DCLAKKDPTECFFPAELVKSITAPTLILNSAYDSWQIQNALAPDGSFPGQSWSSCKTDIR 300
           DCLAKKDPTECFFPAELVKSITAPTLILNSAYDSWQIQNALAPDGSFPGQSWSSCKTDIR
Sbjct: 241 DCLAKKDPTECFFPAELVKSITAPTLILNSAYDSWQIQNALAPDGSFPGQSWSSCKTDIR 300

Query: 301 NCSSTQIQVFNGFRNXXXXXXXXXXXXXXWGLFIDSCFTHCQTPFDISWNSQASPVLGNK 360
           NCSSTQIQVFNGFRN              WGLFIDSCFTHCQTPFDISWNSQASPVLGNK
Sbjct: 301 NCSSTQIQVFNGFRNKFVDDIEVVKDKKDWGLFIDSCFTHCQTPFDISWNSQASPVLGNK 360

Query: 361 IVAEAIGDWYFERSYEVKEIDCEYPCNPTCSSQLPK 396
           IVAEAIGDWYFERSYEVKEIDCEYPCNPTCSSQLPK
Sbjct: 361 IVAEAIGDWYFERSYEVKEIDCEYPCNPTCSSQLPK 396
>Os01g0974500 Pectinacetylesterase family protein
          Length = 430

 Score =  411 bits (1056), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 190/362 (52%), Positives = 247/362 (68%), Gaps = 3/362 (0%)

Query: 30  VELTLLTGAREKGAVCLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCSKRKMSA 89
           V+LTL+ GA+EKGAVCLDG+PPGYH   GFG G + W +HL+GG+WC     C  RK ++
Sbjct: 59  VDLTLVHGAKEKGAVCLDGTPPGYHWLPGFGDGSNKWLLHLEGGSWCRNRTSCDHRKKTS 118

Query: 90  YGSSKFMRA-VEFNGILSNDQQLNSDFYNWNRVFIRYCDGASFSGDGEAQDQDGSTLHFR 148
            GSS +M   VEF GILS+D+  N DFYNWN+V IRYCDGAS SG+ + + Q G+T  FR
Sbjct: 119 LGSSAYMETRVEFVGILSDDKAQNPDFYNWNKVKIRYCDGASLSGNVQDEHQYGATFFFR 178

Query: 149 GLRIWEAVINELMGKGLATAKQAILSGCSAGGLAALLHCNDFYARFSKEVSAKCLPDAGF 208
           G RIWEAV+ EL+ KGLA AKQA L+GCSAGGL+  +HC+DF A   K+ + KCL D GF
Sbjct: 179 GQRIWEAVMAELLPKGLARAKQAFLTGCSAGGLSTYIHCDDFRALLPKDSTVKCLADGGF 238

Query: 209 FLDIEDLSGERHMWSVFNGTVHLQNVTQVLSKDCLAKKDPTECFFPAELVKSITAPTLIL 268
           FLD+ED+SG R+M   +N     Q++ +     C +  +P +CFFP E+ K IT P  IL
Sbjct: 239 FLDVEDISGRRYMRGFYNDVARQQDLRKRFP-GCSSDMEPGQCFFPQEVAKGITTPMFIL 297

Query: 269 NSAYDSWQIQNALAPDGSFPGQSWSSCKTDIRNCSSTQIQVFNGFRNXXXXXXXXXXXXX 328
           N AYD WQ+++ L PDGS P   W  C+ DI  C++ Q+++  GFR              
Sbjct: 298 NPAYDVWQVEHVLTPDGSDPQNLWQDCRMDITKCNTKQLEILQGFRKSLLDAISEFKKKR 357

Query: 329 XWGLFIDSCFTHCQTPFDISWNSQASPVLGNKIVAEAIGDWYFERSYEVKEIDCEYPCNP 388
            WG+FIDSCF HCQ+   ++W+S ++  + NK VAEA+GDW+F+R  EVKEIDCEYPCNP
Sbjct: 358 GWGMFIDSCFIHCQSMKSLAWHSPSASRINNKTVAEAVGDWFFDRR-EVKEIDCEYPCNP 416

Query: 389 TC 390
           TC
Sbjct: 417 TC 418
>Os07g0634600 Similar to Pectin acetylesterase (Fragment)
          Length = 411

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 179/362 (49%), Positives = 238/362 (65%), Gaps = 5/362 (1%)

Query: 30  VELTLLTGAREKGAVCLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCSKRKMSA 89
           V +TL+  A  KGAVCLDGS PGYHL RGFGSG +SW ++L+GG WCN ++ C  RK S 
Sbjct: 45  VGITLIQSAAAKGAVCLDGSLPGYHLHRGFGSGANSWLVNLEGGGWCNDVKSCVFRKSSR 104

Query: 90  YGSSKFMRA-VEFNGILSNDQQLNSDFYNWNRVFIRYCDGASFSGDGEAQDQDGSTLHFR 148
            GSS  M + ++F GI+SN  + N DFYNWNRV +RYCDG SF+GDG       + L+FR
Sbjct: 105 RGSSNHMESQLQFTGIMSNRPEENPDFYNWNRVKVRYCDGGSFTGDGADAS---AGLYFR 161

Query: 149 GLRIWEAVINELMGKGLATAKQAILSGCSAGGLAALLHCNDFYARFSKEVSAKCLPDAGF 208
           G RIW+A +++LM +G+  A QA+LSGCSAGG++ +LHC++F   FS   + KCL DAG 
Sbjct: 162 GQRIWQAAMDDLMAQGMRYANQALLSGCSAGGVSTILHCDEFRGLFSGSTNVKCLADAGM 221

Query: 209 FLDIEDLSGERHMWSVFNGTVHLQNVTQVLSKDCLAKKDPTECFFPAELVKSITAPTLIL 268
           FLD  D+SG+R M   FNG V LQ   + L + C ++ D T CFFP  +V +I  PT IL
Sbjct: 222 FLDFVDVSGQREMRDFFNGIVRLQGSGRSLPRSCTSRMDKTSCFFPQNVVPNIQTPTFIL 281

Query: 269 NSAYDSWQIQNALAPDGSFPGQSWSSCKTDIRNCSSTQIQVFNGFRNXXXXXXXXXXXXX 328
           N+AYD WQ+Q ++AP  + P   W  C+ +  +C+S Q+Q   GFRN             
Sbjct: 282 NTAYDVWQLQQSVAPKRADPQGLWRGCRMNHASCNSNQLQFLQGFRNQMLDAVRGFSGAR 341

Query: 329 XWGLFIDSCFTHCQTPFDISWNSQASPVLGNKIVAEAIGDWYFERSYEVKEIDCEYPCNP 388
             GLFI+SCF HCQ+    +W +  SP LGNK +AEA+GDW+F+R+ + K  DC YPC+ 
Sbjct: 342 QNGLFINSCFAHCQSERQDTWYAGDSPRLGNKRIAEAVGDWFFDRA-DAKYTDCAYPCDG 400

Query: 389 TC 390
           TC
Sbjct: 401 TC 402
>Os02g0702400 Pectinacetylesterase family protein
          Length = 397

 Score =  367 bits (942), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 171/375 (45%), Positives = 243/375 (64%), Gaps = 5/375 (1%)

Query: 23  VARSVDG--VELTLLTGAREKGAVCLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIE 80
           V  +VDG  V++T +  A  KGAVCLDGSPP YHL RGFGSG +SW +H +GG WC+ + 
Sbjct: 18  VFLTVDGDFVDITYVASAVAKGAVCLDGSPPAYHLARGFGSGVNSWLVHFEGGGWCSNVT 77

Query: 81  DCSKRKMSAYGSSKFM-RAVEFNGILSNDQQLNSDFYNWNRVFIRYCDGASFSGDGEAQD 139
            C +RK +  GSSK M + + F+GILSN    N DFYNWN+V +RYCDG+SF+GD E  D
Sbjct: 78  TCLQRKRTRLGSSKQMAKQIAFSGILSNTPDYNPDFYNWNKVKVRYCDGSSFTGDVEKVD 137

Query: 140 QDGSTLHFRGLRIWEAVINELMGKGLATAKQAILSGCSAGGLAALLHCNDFYARFSKEVS 199
              + LH+RG R+W+AV+++L+ KG+ +A  A++SGCSAGGL ++LHC+ F   F  +  
Sbjct: 138 P-ATKLHYRGARVWQAVMDDLLAKGMNSANNALISGCSAGGLTSILHCDRFRDLFPVDTK 196

Query: 200 AKCLPDAGFFLDIEDLSGERHMWSVFNGTVHLQNVTQVLSKDCLAKKDPTECFFPAELVK 259
            KCL DAGFF++ +D++G  ++ + FNG        + L   C ++  P  CFFP   VK
Sbjct: 197 VKCLSDAGFFINEKDIAGVEYIVAFFNGVATTHGSAKNLPSACTSRLSPGMCFFPQNEVK 256

Query: 260 SITAPTLILNSAYDSWQIQNALAPDGSFPGQSWSSCKTDIRNCSSTQIQVFNGFRNXXXX 319
            I  P  ILN+AYDSWQ++N L P  + P   W SCK DI  C ++Q+Q+  GFR+    
Sbjct: 257 QIQTPLFILNAAYDSWQVRNILVPGFADPHGKWHSCKHDIDQCPASQLQILQGFRDDFLK 316

Query: 320 XXXXXXXXXXWGLFIDSCFTHCQTPFDISWNSQASPVLGNKIVAEAIGDWYFERSYEVKE 379
                      GLFI+SCF HCQ+    +W +  SP+L  K +A+A+GDW+++R+   ++
Sbjct: 317 ALKEQGTPSTRGLFINSCFVHCQSETQETWFASGSPMLETKTIADAVGDWFYDRN-PFQK 375

Query: 380 IDCEYPCNPTCSSQL 394
           IDC YPC+ TC +++
Sbjct: 376 IDCPYPCDSTCHNRI 390
>Os04g0602500 Similar to Pectin acetylesterase
          Length = 466

 Score =  354 bits (909), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 160/365 (43%), Positives = 230/365 (63%), Gaps = 3/365 (0%)

Query: 30  VELTLLTGAREKGAVCLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCSKRKMSA 89
           V++  L  A   GAVCLDGSPP YH   G GSG ++W +H++GG WC   ++CS R+ + 
Sbjct: 101 VDMVFLKSAVSTGAVCLDGSPPVYHFSPGSGSGANNWLVHMEGGGWCRNAQECSVRQGNF 160

Query: 90  YGSSKFMRAVEFNGILSNDQQLNSDFYNWNRVFIRYCDGASFSGDGEAQDQDGSTLHFRG 149
            GSSKFMR + F+GI+  +Q+ N DFYNWNR+ +RYCDG+SF+GD E  +   + LHFRG
Sbjct: 161 RGSSKFMRPLSFSGIIGGNQRNNPDFYNWNRIKVRYCDGSSFTGDVETVET-STNLHFRG 219

Query: 150 LRIWEAVINELMGKGLATAKQAILSGCSAGGLAALLHCNDFYARFSKEVSAKCLPDAGFF 209
            R+W A+I +L+ KG++ A+ A+LSGCSAGGLAA+LHC+ F        + KC  DAGFF
Sbjct: 220 ARVWNAIIEDLLAKGMSKAQNALLSGCSAGGLAAILHCDQFRDLLPATANVKCFSDAGFF 279

Query: 210 LDIEDLSGERHMWSVFNGTVHLQNVTQVLSKDCLAKKDPTECFFPAELVKSITAPTLILN 269
           +D +D++G   + + +   V+L    + L   C +K  P  CFFP  +V ++  P  ILN
Sbjct: 280 VDGKDITGNDFVRTFYKDVVNLHGSAKNLPSSCTSKMSPDLCFFPQNVVPTLRTPLFILN 339

Query: 270 SAYDSWQIQNALAPDGSFPGQSWSSCKTDIRNCSSTQIQVFNGFR-NXXXXXXXXXXXXX 328
           +AYD+WQI+N LAP  +   ++W+ CK DI  CSS+Q+     FR +             
Sbjct: 340 AAYDAWQIKNVLAPSAADKKKTWAKCKLDITACSSSQLTTLQNFRTDFLAALPKPEQSPA 399

Query: 329 XWGLFIDSCFTHCQTPFDISWNSQASPVLGNKIVAEAIGDWYFERSYEVKEIDCEYPCNP 388
              +FIDSC+ HCQ+    +W +Q SPV+    + +A+GDW+ +R    + IDC YPCNP
Sbjct: 400 NLSIFIDSCYAHCQSGSQDTWLAQGSPVVEKTQIGKAVGDWFHDREVS-RRIDCPYPCNP 458

Query: 389 TCSSQ 393
           TC ++
Sbjct: 459 TCKNR 463
>Os01g0319000 Similar to Pectin acetylesterase (Fragment)
          Length = 418

 Score =  339 bits (870), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 165/362 (45%), Positives = 219/362 (60%), Gaps = 6/362 (1%)

Query: 30  VELTLLTGAREKGAVCLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCSKRKMSA 89
           V +T+L  A +KGAVC+DG+PP YHL  G G G  SW ++L+GG WCN    C  R  S 
Sbjct: 58  VPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTASR 117

Query: 90  YGSSKFM-RAVEFNGILSNDQQLNSDFYNWNRVFIRYCDGASFSGDGEAQDQDGSTLHFR 148
           +GSS  M R + F GI+S+    N DF++WNRV IRYCD  SF+GD      +G  L FR
Sbjct: 118 HGSSDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDAF---NEGLKLQFR 174

Query: 149 GLRIWEAVINELMGKGLATAKQAILSGCSAGGLAALLHCNDFYARFSKEVSAKCLPDAGF 208
           G RIW AVI  L+  G+A+A+  +L+GCSAGGLAA+LHC+   A      + KCL D G 
Sbjct: 175 GQRIWGAVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDGGL 234

Query: 209 FLDIEDLSGERHMWSVFNGTVHLQNVTQVLSKDCLAKKDPTECFFPAELVKSITAPTLIL 268
           FLD  D++G R + S +   V LQ V   L + C    D T CFFP  ++  I  P  +L
Sbjct: 235 FLDAVDVAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATSCFFPQNIIDGIKTPIFLL 294

Query: 269 NSAYDSWQIQNALAPDGSFPGQSWSSCKTDIRNCSSTQIQVFNGFRNXXXXXXXXXXXXX 328
           N+AYD WQI+ +LAP+ +    +W  CK +   C+++Q+Q   GFR+             
Sbjct: 295 NAAYDVWQIEQSLAPNAADTSGTWRVCKFNRAACNASQLQFLQGFRDQMVAAVRVFSESR 354

Query: 329 XWGLFIDSCFTHCQTPFDISWNSQASPVLGNKIVAEAIGDWYFERSYEVKEIDCEYPCNP 388
             GLFI+SCF HCQ+    +WN   SP L NK +A+++GDWYF R+ EVK IDC YPC+ 
Sbjct: 355 SNGLFINSCFAHCQSELTATWNG-GSPALQNKGIAKSVGDWYFGRA-EVKAIDCPYPCDK 412

Query: 389 TC 390
           TC
Sbjct: 413 TC 414
>Os01g0892400 Pectinacetylesterase family protein
          Length = 163

 Score =  209 bits (531), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 95/113 (84%), Positives = 103/113 (91%)

Query: 28  DGVELTLLTGAREKGAVCLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCSKRKM 87
           D VELTLL GA+EKGAVCLDGSPPGYHLQRGFGSGEHSW + L+GGAWCN+IE CS+RKM
Sbjct: 41  DVVELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKM 100

Query: 88  SAYGSSKFMRAVEFNGILSNDQQLNSDFYNWNRVFIRYCDGASFSGDGEAQDQ 140
             YGSSKFM+A EFNGILSNDQQLNSDFYNWN+V IRYCDGASFSGD EAQD+
Sbjct: 101 GVYGSSKFMKAAEFNGILSNDQQLNSDFYNWNKVAIRYCDGASFSGDAEAQDK 153
>Os10g0550500 Similar to Pectinacetylesterase
          Length = 211

 Score =  205 bits (522), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 100/184 (54%), Positives = 129/184 (70%), Gaps = 2/184 (1%)

Query: 30  VELTLLTGAREKGAVCLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCSKRKMSA 89
           V +TLL  A   GAVCLDGSPP YHL RG G G   W +  +GG WCN    C++R  + 
Sbjct: 29  VGMTLLQAATSTGAVCLDGSPPAYHLHRGSGGGAGGWVLQFEGGGWCNDAPSCAERAGTR 88

Query: 90  YGSSKFMRAVE-FNGILSNDQQLNSDFYNWNRVFIRYCDGASFSGDGEAQDQDGSTLHFR 148
            GS++ M ++E F+G+LSND  +N DFYNWNRV +RYCDG SF+GD E ++   S L+FR
Sbjct: 89  RGSTRSMDSLEVFSGLLSNDPDMNPDFYNWNRVKLRYCDGGSFAGDSELRNGS-SVLYFR 147

Query: 149 GLRIWEAVINELMGKGLATAKQAILSGCSAGGLAALLHCNDFYARFSKEVSAKCLPDAGF 208
           G RIW+A+I++L+ KGLA A++ +LSGCSAGGLA   HC+D   R    V+ KCL DAGF
Sbjct: 148 GQRIWDAIISDLLPKGLAKAQKVLLSGCSAGGLATFFHCDDLKGRLGDAVTVKCLSDAGF 207

Query: 209 FLDI 212
           FLD+
Sbjct: 208 FLDV 211
>Os05g0111900 Similar to Pectinacetylesterase precursor
          Length = 203

 Score =  180 bits (456), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 89/149 (59%), Positives = 111/149 (74%), Gaps = 3/149 (2%)

Query: 30  VELTLLTGAREKGAVCLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCSKRKMSA 89
           V LTL+  A+EKGAVCLDGS PGYHLQRG G+G  +W +HL+GG WC  +  C+ R+ S 
Sbjct: 42  VGLTLVRRAKEKGAVCLDGSAPGYHLQRGSGTGSQNWLLHLEGGGWCRNLRSCASRQKSV 101

Query: 90  YGSSKFMR-AVEFNGILSNDQQLNSDFYNWNRVFIRYCDGASFSGDGEAQDQDGSTLHFR 148
            GSS++M   +EF GILSND+  N DFYNWN+V IRYCDGASFSG+ + + Q+G+   FR
Sbjct: 102 LGSSQYMECQIEFAGILSNDKFQNPDFYNWNKVKIRYCDGASFSGNVKNELQNGTKFFFR 161

Query: 149 GLRIWEAVINELMGKGLATAKQAILSGCS 177
           G RIWEAV++EL+ KGL  AKQ  LSG S
Sbjct: 162 GQRIWEAVMSELLLKGLRHAKQ--LSGFS 188
>Os01g0892500 Pectinacetylesterase family protein
          Length = 119

 Score =  140 bits (352), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 72/86 (83%)

Query: 28  DGVELTLLTGAREKGAVCLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCSKRKM 87
           D VEL LLTGA+EKGAVCLDGSPPGYHLQRGFGSGEHSW I+L+GG WC+TIE CS RK 
Sbjct: 30  DVVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKT 89

Query: 88  SAYGSSKFMRAVEFNGILSNDQQLNS 113
           +  GSSK M A EF GILSN+Q +NS
Sbjct: 90  TELGSSKLMEAQEFEGILSNNQTVNS 115
  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.135    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,352,494
Number of extensions: 598679
Number of successful extensions: 1123
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1101
Number of HSP's successfully gapped: 10
Length of query: 396
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 293
Effective length of database: 11,657,759
Effective search space: 3415723387
Effective search space used: 3415723387
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)