Os07g0634600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pectin acetylesterase (Fragment).
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Os07g0634600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pectin acetylesterase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 203.32 | 0.67 | 7.41 | -6.07 | 1.6 | 2.46 | 1.68 | -6.51 | -1.06 | 8.35 | 25.27 | 1252 | -- | -- |
| 217.25 | 0.686 | 7.19 | -4.39 | 1.64 | 1.77 | 1.85 | -- | -0.595 | 8.25 | 25.84 | 1226 | -- | -- |
| 212.1 | 0.678 | 7.42 | -6.08 | 1.6 | 2.47 | -- | -6.8 | -1.06 | 8.34 | 25.35 | 1243 | -- | -- |
| 228.03 | 0.703 | 7.19 | -4.34 | 1.56 | 1.71 | -- | -- | -0.579 | 8.26 | 25.91 | 1263 | -- | -- |
| 343.05 | 0.863 | 7.48 | -6.14 | -- | 2.36 | -- | -6.38 | -1.16 | -- | 24.61 | 1358 | -- | -- |
| 336.65 | 0.86 | 7.17 | -3.84 | 1.53 | -- | 1.85 | -- | -0.462 | 7.6 | -- | -- | -- | -- |
| 346.23 | 0.871 | 7.17 | -3.79 | 1.53 | -- | -- | -- | -0.465 | 7.54 | -- | -- | -- | -- |
| 355.96 | 0.879 | 7.21 | -4.33 | -- | 1.6 | -- | -- | -0.508 | -- | 26.22 | 1362 | -- | -- |
| 693.29 | 1.23 | 7.04 | -- | 1.49 | 0.874 | -- | -- | 0.0594 | 7.97 | 28.58 | 2630 | -- | -- |
| 471.88 | 1.02 | 7.21 | -3.77 | -- | -- | -- | -- | -0.442 | -- | -- | -- | -- | -- |
| 725.3 | 1.26 | 7.08 | -- | 1.5 | -- | -- | -- | -0.043 | 7.71 | -- | -- | -- | -- |
| 810.65 | 1.33 | 7.09 | -- | -- | 0.806 | -- | -- | 0.0855 | -- | 28.7 | 1311 | -- | -- |
| 846.77 | 1.36 | 7.11 | -- | -- | -- | -- | -- | -0.0234 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 196.62 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 10 | 197.64 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 18 |
| 11 | 197.76 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 18 | 198.01 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 25 | 198.19 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 37 | 198.62 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 42 | 198.72 | wind | 5 | 43200 | > th | dose dependent | sin | 22 | NA |
| 50 | 198.80 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 16 |
| 60 | 199.01 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 20 |
| 63 | 199.05 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 22 |
| 66 | 199.05 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 88 | 199.25 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 14 |
| 92 | 199.27 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 22 |
| 119 | 199.54 | wind | 5 | 43200 | > th | dose independent | sin | 0 | NA |
| 120 | 199.55 | wind | 5 | 43200 | < th | dose independent | sin | 0 | NA |
| 283 | 200.69 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 326 | 201.06 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 329 | 201.09 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 416 | 201.80 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 424 | 201.87 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 437 | 201.97 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 497 | 202.46 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 562 | 202.88 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 571 | 202.97 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 604 | 203.23 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 651 | 203.50 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 718 | 203.91 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 765 | 204.18 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 966 | 205.44 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 989 | 205.60 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 16 |