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Os01g0974500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Pectinacetylesterase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.61 (0.0165) R2 : 0.447
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.793 (0.0414) R2dC : 0.448 R2C : 0.443
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0555 (0.0347) R2dN8 : 0.00401 R2N8 : -0.000574
σ : 0.311
deviance : 44.16
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C
peak time of C : 20.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.72 0.281 8.64 -0.483 0.786 -0.4 -0.123 0.394 -0.0368 20.5 1011 787 -- --
35.99 0.282 8.63 -0.41 0.78 -0.457 -0.166 -- -0.0176 20.6 1011 787 -- --
35.76 0.279 8.64 -0.479 0.787 -0.4 -- 0.39 -0.0366 20.6 1011 787 -- --
36.07 0.282 8.63 -0.405 0.78 -0.458 -- -- -0.0177 20.7 1011 787 -- --
69.27 0.388 8.61 -0.491 -- -0.464 -- 0.562 -0.0324 -- 1011 497 -- --
40.27 0.297 8.62 -0.385 0.792 -- -0.17 -- 0.0133 20.7 -- -- -- --
40.36 0.298 8.62 -0.379 0.792 -- -- -- 0.0132 20.7 -- -- -- --
66.99 0.383 8.59 -0.405 -- -0.461 -- -- 0.0351 -- 1010 148 -- --
40.31 0.296 8.62 -- 0.777 -0.427 -- -- 0.0252 20.6 1011 162 -- --
75.86 0.407 8.6 -0.381 -- -- -- -- 0.00679 -- -- -- -- --
44.16 0.311 8.61 -- 0.793 -- -- -- 0.0555 20.7 -- -- -- --
70.02 0.391 8.58 -- -- -0.5 -- -- 0.0875 -- 1010 19 -- --
79.69 0.417 8.59 -- -- -- -- -- 0.0491 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.01 humidity 60 43200 < th dose independent rect. 6 1
2 35.19 atmosphere 1010 90 < th dose independent rect. 20 21
3 35.21 atmosphere 1010 90 < th dose independent rect. 19 23
4 35.22 humidity 70 43200 < th dose independent rect. 2 5
5 35.26 radiation 1 1440 > th dose independent rect. 10 3
8 35.33 temperature 15 14400 < th dose independent rect. 17 16
16 35.34 temperature 15 14400 > th dose independent sin 14 NA
17 35.34 temperature 15 14400 < th dose independent rect. 15 14
22 35.34 temperature 15 14400 > th dose independent rect. 12 17
26 35.34 temperature 15 14400 < th dose independent rect. 2 19
30 35.34 temperature 15 14400 > th dose independent rect. 4 21
33 35.34 temperature 15 14400 > th dose independent rect. 2 23
35 35.34 temperature 15 14400 > th dose independent rect. 6 23
37 35.34 temperature 15 14400 > th dose independent rect. 10 23
38 35.34 temperature 15 14400 > th dose independent rect. 12 23
39 35.34 temperature 15 14400 > th dose independent rect. 24 23
41 35.35 temperature 15 14400 > th dose independent no NA NA
50 35.35 temperature 15 14400 < th dose independent rect. 2 17
60 35.35 temperature 15 14400 > th dose independent rect. 2 21
61 35.35 temperature 15 14400 > th dose independent rect. 24 21
71 35.35 temperature 15 14400 > th dose independent rect. 15 22
85 35.35 temperature 15 14400 > th dose independent rect. 22 23
87 35.35 humidity 70 43200 < th dose dependent rect. 5 2
88 35.36 temperature 15 14400 < th dose independent sin 12 NA
89 35.36 temperature 15 14400 > th dose independent rect. 17 11
92 35.36 temperature 15 14400 > th dose independent rect. 15 14
132 35.37 temperature 15 14400 > th dose independent sin 1 NA
135 35.37 temperature 15 14400 > th dose independent rect. 20 2
212 35.39 temperature 15 14400 < th dose independent rect. 22 11
238 35.40 temperature 15 14400 < th dose independent sin 7 NA
240 35.40 temperature 15 14400 < th dose independent sin 5 NA
242 35.40 temperature 15 14400 < th dose independent rect. 5 3
243 35.40 temperature 15 14400 < th dose independent rect. 5 5
253 35.40 temperature 15 14400 > th dose independent rect. 4 16
271 35.40 temperature 15 14400 < th dose independent rect. 7 23
272 35.40 atmosphere 1010 30 < th dose independent rect. 5 23
275 35.41 humidity 70 43200 > th dose independent rect. 2 5
282 35.41 temperature 15 14400 < th dose independent rect. 24 11
310 35.42 temperature 15 14400 < th dose independent no NA NA
314 35.42 temperature 15 14400 < th dose independent rect. 24 9
315 35.42 temperature 15 14400 > th dose independent rect. 5 10
433 35.45 temperature 15 14400 > th dose independent rect. 7 3
434 35.45 temperature 15 14400 > th dose independent rect. 23 3
435 35.45 temperature 15 14400 < th dose independent rect. 23 5
438 35.45 temperature 15 14400 < th dose independent rect. 4 7
470 35.46 temperature 15 14400 > th dose independent rect. 1 1
477 35.46 humidity 60 43200 < th dose independent rect. 23 9
498 35.47 temperature 15 14400 < th dose independent rect. 23 1
499 35.47 temperature 15 14400 < th dose independent rect. 1 2
521 35.48 temperature 15 14400 > th dose independent rect. 1 3
621 35.54 atmosphere 1010 270 < th dose independent rect. 9 15
632 35.56 temperature 15 14400 < th dose independent rect. 8 2
634 35.56 temperature 15 14400 > th dose independent rect. 5 6
664 35.59 wind 1 14400 < th dose independent rect. 5 1
666 35.59 humidity 60 43200 > th dose independent rect. 6 1
677 35.60 atmosphere 1010 720 < th dose independent rect. 10 5
682 35.60 atmosphere 1010 720 < th dose independent rect. 10 20
691 35.61 atmosphere 1010 30 < th dose independent rect. 3 23
694 35.62 atmosphere 1010 720 > th dose independent rect. 10 21
700 35.63 wind 1 43200 < th dose independent rect. 13 8
728 35.67 atmosphere 1010 720 > th dose independent rect. 5 21
735 35.68 radiation 20 43200 < th dose independent rect. 17 9
736 35.68 atmosphere 1010 720 < th dose independent rect. 12 18
741 35.69 radiation 20 43200 < th dose independent rect. 17 4
766 35.71 atmosphere 1010 30 < th dose independent sin 18 NA
772 35.71 radiation 20 43200 < th dose independent rect. 17 11
789 35.72 atmosphere 1010 720 < th dose independent rect. 3 18
790 35.72 radiation 1 43200 > th dose dependent rect. 18 1
830 35.76 radiation 40 43200 < th dose independent rect. 15 1
840 35.77 atmosphere 1010 720 > th dose independent no NA NA
846 35.77 radiation 40 43200 < th dose independent rect. 15 6
848 35.77 radiation 40 43200 < th dose independent rect. 15 10
855 35.78 radiation 20 43200 < th dose independent rect. 17 1
858 35.78 wind 1 43200 > th dose independent rect. 13 8
864 35.78 radiation 40 43200 < th dose independent rect. 15 13
886 35.79 atmosphere 1010 720 > th dose independent rect. 15 16
896 35.79 humidity 70 43200 < th dose dependent rect. 1 7
897 35.79 wind 1 43200 < th dose dependent rect. 12 9
907 35.80 atmosphere 1010 720 < th dose independent rect. 19 11
918 35.81 wind 1 14400 > th dose independent rect. 5 1
926 35.81 atmosphere 1010 720 > th dose independent rect. 22 23
928 35.82 atmosphere 1010 720 < th dose independent sin 23 NA
929 35.82 atmosphere 1010 30 < th dose independent no NA NA
935 35.82 atmosphere 1010 30 > th dose independent rect. 23 13
962 35.83 atmosphere 1010 30 > th dose independent no NA NA
970 35.83 atmosphere 1010 30 > th dose independent rect. 9 16