Os01g0892600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinacetylesterase family protein.
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Os01g0892600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinacetylesterase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.12 | 0.436 | 11.4 | -1.36 | 4.78 | 1.83 | 1.23 | 0.793 | -0.425 | 7.09 | 21.4 | 1252 | -- | -- |
| 86.58 | 0.433 | 11.4 | -1.29 | 4.78 | 1.62 | 1.19 | -- | -0.413 | 7.09 | 21.56 | 1245 | -- | -- |
| 90.07 | 0.442 | 11.4 | -1.32 | 4.78 | 1.89 | -- | 0.771 | -0.425 | 7.09 | 21.28 | 1270 | -- | -- |
| 90.46 | 0.443 | 11.4 | -1.26 | 4.79 | 1.66 | -- | -- | -0.413 | 7.09 | 21.47 | 1277 | -- | -- |
| 913.94 | 1.41 | 11.4 | -0.533 | -- | 5.1 | -- | 0.306 | 0.182 | -- | 87.46 | 483 | -- | -- |
| 108.71 | 0.489 | 11.5 | -1.72 | 4.76 | -- | 1.35 | -- | -0.612 | 7.15 | -- | -- | -- | -- |
| 113.57 | 0.499 | 11.5 | -1.69 | 4.77 | -- | -- | -- | -0.615 | 7.14 | -- | -- | -- | -- |
| 913.85 | 1.41 | 11.4 | -0.475 | -- | 5.12 | -- | -- | 0.202 | -- | 329.2 | 488 | -- | -- |
| 111.44 | 0.492 | 11.4 | -- | 4.75 | 2.15 | -- | -- | -0.151 | 7.13 | 21.1 | 8348 | -- | -- |
| 1313.72 | 1.69 | 11.6 | -1.6 | -- | -- | -- | -- | -0.531 | -- | -- | -- | -- | -- |
| 189.11 | 0.643 | 11.4 | -- | 4.75 | -- | -- | -- | -0.426 | 7.16 | -- | -- | -- | -- |
| 919.35 | 1.41 | 11.4 | -- | -- | 5.29 | -- | -- | 0.275 | -- | 281.7 | 488 | -- | -- |
| 1381.52 | 1.73 | 11.5 | -- | -- | -- | -- | -- | -0.353 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.27 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 5 |
| 4 | 77.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 8 |
| 15 | 78.42 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 12 |
| 19 | 78.85 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 12 |
| 28 | 79.63 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 5 |
| 49 | 80.78 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 4 |
| 110 | 82.08 | temperature | 25 | 720 | < th | dose dependent | sin | 1 | NA |
| 170 | 83.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 12 |
| 213 | 84.06 | temperature | 20 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 214 | 84.08 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 8 |
| 281 | 84.77 | temperature | 20 | 720 | > th | dose independent | sin | 2 | NA |
| 287 | 84.86 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 14 |
| 304 | 85.01 | temperature | 15 | 90 | > th | dose dependent | sin | 22 | NA |
| 308 | 85.05 | temperature | 15 | 270 | > th | dose dependent | sin | 0 | NA |
| 341 | 85.24 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 6 |
| 440 | 85.94 | temperature | 20 | 720 | < th | dose independent | sin | 1 | NA |
| 448 | 85.98 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 8 |
| 451 | 86.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 456 | 86.05 | temperature | 20 | 1440 | > th | dose independent | rect. | 24 | 12 |
| 460 | 86.06 | temperature | 20 | 1440 | < th | dose dependent | sin | 9 | NA |
| 468 | 86.10 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 473 | 86.11 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 14 |
| 499 | 86.19 | temperature | 15 | 720 | > th | dose dependent | sin | 4 | NA |
| 538 | 86.30 | temperature | 20 | 1440 | < th | dose independent | sin | 6 | NA |
| 546 | 86.32 | temperature | 20 | 1440 | > th | dose independent | sin | 6 | NA |
| 739 | 86.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 742 | 86.78 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 868 | 86.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 6 |
| 897 | 87.04 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 971 | 87.17 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 979 | 87.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |