Os01g0892500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinacetylesterase family protein.
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Os01g0892500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinacetylesterase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 223.15 | 0.702 | 9.64 | -1.39 | 2.45 | 3.57 | 1.19 | 1.69 | -0.222 | 6.26 | -0.04324 | 302 | 16 | 2.93 |
| 222.86 | 0.695 | 9.65 | -1.44 | 2.52 | 3.82 | 0.992 | -- | -0.238 | 6.28 | -0.05004 | 309 | 15.9 | 2.93 |
| 225.21 | 0.699 | 9.65 | -1.4 | 2.48 | 3.87 | -- | -1.02 | -0.224 | 6.33 | -0.04767 | 302 | 16 | 2.97 |
| 225.14 | 0.699 | 9.65 | -1.4 | 2.53 | 3.65 | -- | -- | -0.229 | 6.29 | -0.05425 | 309 | 16 | 2.97 |
| 407.64 | 0.945 | 9.69 | -1.17 | -- | -1.35 | -- | 0.269 | -0.174 | -- | -0.04767 | 302 | 16 | 2.97 |
| 273.09 | 0.775 | 9.66 | -1.27 | 1.96 | -- | 0.459 | -- | -0.221 | 5.93 | -- | -- | -- | -- |
| 273.6 | 0.775 | 9.66 | -1.27 | 1.97 | -- | -- | -- | -0.223 | 5.94 | -- | -- | -- | -- |
| 374.34 | 0.901 | 9.6 | -0.885 | -- | -1.35 | -- | -- | -0.0759 | -- | -1.456 | 32 | 13.6 | 5.28 |
| 277.2 | 0.775 | 9.63 | -- | 2.5 | 3.27 | -- | -- | -0.202 | 6.22 | -0.06024 | 306 | 16 | 2.93 |
| 473.77 | 1.02 | 9.69 | -1.21 | -- | -- | -- | -- | -0.178 | -- | -- | -- | -- | -- |
| 315.83 | 0.831 | 9.63 | -- | 1.95 | -- | -- | -- | -0.082 | 5.97 | -- | -- | -- | -- |
| 393.19 | 0.924 | 9.67 | -- | -- | -1.35 | -- | -- | -0.0398 | -- | -1.799 | 22 | 13.8 | 6.1 |
| 512.22 | 1.06 | 9.66 | -- | -- | -- | -- | -- | -0.0438 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 232.04 | wind | 5.0 | 90 | < th | dose independent | rect. | 23 | 18 |
| 4 | 237.64 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 3 |
| 6 | 238.86 | wind | 5.0 | 270 | < th | dose independent | rect. | 20 | 21 |
| 14 | 239.83 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 21 | 241.02 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 27 | 241.87 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 28 | 241.87 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 29 | 242.17 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 18 | 5 |
| 40 | 242.96 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 18 | 5 |
| 44 | 243.13 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 45 | 243.15 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 55 | 243.54 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 56 | 243.57 | temperature | 25.0 | 30 | > th | dose independent | rect. | 8 | 10 |
| 61 | 243.91 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 66 | 244.05 | wind | 9.0 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 70 | 244.18 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 4 | 15 |
| 75 | 244.37 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 7 | 12 |
| 82 | 244.49 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 12 |
| 83 | 244.49 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 18 |
| 84 | 244.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 23 |
| 85 | 244.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 91 | 244.66 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 17 | 2 |
| 92 | 244.68 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 14 | 4 |
| 113 | 245.18 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 127 | 245.40 | wind | 9.0 | 270 | < th | dose dependent | rect. | 20 | 20 |
| 131 | 245.46 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 143 | 245.64 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 20 |
| 144 | 245.66 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 5 | 14 |
| 147 | 245.71 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 151 | 245.79 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 5 | 18 |
| 165 | 245.95 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 22 |
| 167 | 246.00 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 9 | 9 |
| 178 | 246.21 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 24 | 4 |
| 188 | 246.28 | radiation | 10.0 | 30 | < th | dose independent | rect. | 5 | 18 |
| 194 | 246.39 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 12 |
| 196 | 246.41 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 198 | 246.44 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 6 | 12 |
| 207 | 246.51 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 17 | NA |
| 209 | 246.52 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 221 | 246.58 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 249 | 246.78 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 250 | 246.78 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 17 | 6 |
| 251 | 246.78 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 17 | 8 |
| 275 | 246.95 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 279 | 246.99 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 286 | 247.05 | temperature | 25.0 | 30 | > th | dose independent | rect. | 23 | 19 |
| 291 | 247.09 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 306 | 247.18 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 18 | 6 |
| 317 | 247.24 | wind | 7.0 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 319 | 247.24 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 11 | 12 |
| 324 | 247.29 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 16 | 7 |
| 342 | 247.45 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 17 | 2 |
| 346 | 247.46 | humidity | 50.0 | 30 | > th | dose independent | rect. | 12 | 11 |
| 353 | 247.50 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 356 | 247.52 | wind | 9.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 374 | 247.61 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 8 | 15 |
| 402 | 247.72 | wind | 5.0 | 90 | < th | dose independent | rect. | 23 | 14 |
| 425 | 247.80 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 427 | 247.81 | wind | 7.0 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 446 | 247.93 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 459 | 248.00 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 17 | 3 |
| 471 | 248.03 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 17 |
| 473 | 248.05 | precipitation | 0.1 | 270 | > th | dose independent | sin | 17 | NA |
| 479 | 248.07 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 14 | 4 |
| 481 | 248.07 | wind | 5.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 483 | 248.07 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 14 | 4 |
| 486 | 248.08 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 17 | 6 |
| 499 | 248.13 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 17 | 2 |
| 507 | 248.17 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 14 | 9 |
| 522 | 248.24 | wind | 5.0 | 30 | < th | dose independent | rect. | 23 | 6 |
| 530 | 248.29 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 2 |
| 538 | 248.31 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 548 | 248.36 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 21 |
| 554 | 248.38 | wind | 5.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 572 | 248.44 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 2 |
| 608 | 248.57 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 23 | 18 |
| 611 | 248.57 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 620 | 248.61 | humidity | 50.0 | 30 | > th | dose independent | rect. | 17 | 6 |
| 627 | 248.63 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 639 | 248.67 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 641 | 248.67 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 643 | 248.68 | radiation | 10.0 | 30 | < th | dose independent | rect. | 16 | 7 |
| 650 | 248.72 | wind | 5.0 | 90 | < th | dose independent | rect. | 8 | 9 |
| 654 | 248.73 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 21 |
| 676 | 248.78 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 15 |
| 698 | 248.84 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 18 | 6 |
| 700 | 248.84 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 713 | 248.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 18 |
| 721 | 248.87 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 2 |
| 726 | 248.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 737 | 248.93 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 740 | 248.93 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 15 |
| 767 | 249.01 | wind | 1.0 | 10 | > th | dose independent | rect. | 18 | 5 |
| 824 | 249.15 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 829 | 249.17 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 840 | 249.20 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 9 |
| 880 | 249.28 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 8 | 14 |
| 883 | 249.29 | precipitation | 0.1 | 270 | > th | dose dependent | no | NA | NA |
| 892 | 249.30 | temperature | 15.0 | 90 | > th | dose independent | rect. | 23 | 18 |
| 898 | 249.32 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 12 | 11 |
| 901 | 249.33 | temperature | 15.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 920 | 249.36 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 16 | 3 |