BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0892500 Os01g0892500|J065043G16
(119 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0892500 Pectinacetylesterase family protein 188 8e-49
Os01g0892400 Pectinacetylesterase family protein 145 5e-36
Os01g0892600 Pectinacetylesterase family protein 140 2e-34
Os01g0974500 Pectinacetylesterase family protein 105 5e-24
Os02g0702400 Pectinacetylesterase family protein 105 1e-23
Os05g0111900 Similar to Pectinacetylesterase precursor 104 1e-23
Os07g0634600 Similar to Pectin acetylesterase (Fragment) 99 6e-22
Os04g0602500 Similar to Pectin acetylesterase 91 2e-19
Os10g0550500 Similar to Pectinacetylesterase 81 2e-16
Os01g0319000 Similar to Pectin acetylesterase (Fragment) 81 2e-16
>Os01g0892500 Pectinacetylesterase family protein
Length = 119
Score = 188 bits (477), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 90/90 (100%), Positives = 90/90 (100%)
Query: 30 DVVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKT 89
DVVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKT
Sbjct: 30 DVVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKT 89
Query: 90 TELGSSKLMEAQEFEGILSNNQTVNSGTCR 119
TELGSSKLMEAQEFEGILSNNQTVNSGTCR
Sbjct: 90 TELGSSKLMEAQEFEGILSNNQTVNSGTCR 119
>Os01g0892400 Pectinacetylesterase family protein
Length = 163
Score = 145 bits (367), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 67/86 (77%), Positives = 74/86 (86%)
Query: 30 DVVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKT 89
DVVEL LL GAQEKGAVCLDGSPPGYHLQRGFGSGEHSWL++LEGG WC++IESCS RK
Sbjct: 41 DVVELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKM 100
Query: 90 TELGSSKLMEAQEFEGILSNNQTVNS 115
GSSK M+A EF GILSN+Q +NS
Sbjct: 101 GVYGSSKFMKAAEFNGILSNDQQLNS 126
>Os01g0892600 Pectinacetylesterase family protein
Length = 396
Score = 140 bits (353), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 72/86 (83%)
Query: 30 DVVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKT 89
D VEL LLTGA+EKGAVCLDGSPPGYHLQRGFGSGEHSW I+L+GG WC+TIE CS RK
Sbjct: 28 DGVELTLLTGAREKGAVCLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCSKRKM 87
Query: 90 TELGSSKLMEAQEFEGILSNNQTVNS 115
+ GSSK M A EF GILSN+Q +NS
Sbjct: 88 SAYGSSKFMRAVEFNGILSNDQQLNS 113
>Os01g0974500 Pectinacetylesterase family protein
Length = 430
Score = 105 bits (263), Expect = 5e-24, Method: Composition-based stats.
Identities = 49/85 (57%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 31 VVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKTT 90
+V+L L+ GA+EKGAVCLDG+PPGYH GFG G + WL++LEGG WC SC +RK T
Sbjct: 58 LVDLTLVHGAKEKGAVCLDGTPPGYHWLPGFGDGSNKWLLHLEGGSWCRNRTSCDHRKKT 117
Query: 91 ELGSSKLMEAQ-EFEGILSNNQTVN 114
LGSS ME + EF GILS+++ N
Sbjct: 118 SLGSSAYMETRVEFVGILSDDKAQN 142
>Os02g0702400 Pectinacetylesterase family protein
Length = 397
Score = 105 bits (261), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/86 (56%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 30 DVVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKT 89
D V++ + A KGAVCLDGSPP YHL RGFGSG +SWL++ EGG WC + +C RK
Sbjct: 25 DFVDITYVASAVAKGAVCLDGSPPAYHLARGFGSGVNSWLVHFEGGGWCSNVTTCLQRKR 84
Query: 90 TELGSSKLMEAQ-EFEGILSNNQTVN 114
T LGSSK M Q F GILSN N
Sbjct: 85 TRLGSSKQMAKQIAFSGILSNTPDYN 110
>Os05g0111900 Similar to Pectinacetylesterase precursor
Length = 203
Score = 104 bits (260), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 30 DVVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKT 89
++V L L+ A+EKGAVCLDGS PGYHLQRG G+G +WL++LEGG WC + SC++R+
Sbjct: 40 NLVGLTLVRRAKEKGAVCLDGSAPGYHLQRGSGTGSQNWLLHLEGGGWCRNLRSCASRQK 99
Query: 90 TELGSSKLMEAQ-EFEGILSNNQTVN 114
+ LGSS+ ME Q EF GILSN++ N
Sbjct: 100 SVLGSSQYMECQIEFAGILSNDKFQN 125
>Os07g0634600 Similar to Pectin acetylesterase (Fragment)
Length = 411
Score = 99.4 bits (246), Expect = 6e-22, Method: Composition-based stats.
Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 32 VELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKTTE 91
V + L+ A KGAVCLDGS PGYHL RGFGSG +SWL+ LEGG WC+ ++SC RK++
Sbjct: 45 VGITLIQSAAAKGAVCLDGSLPGYHLHRGFGSGANSWLVNLEGGGWCNDVKSCVFRKSSR 104
Query: 92 LGSSKLMEAQ-EFEGILSNNQTVN 114
GSS ME+Q +F GI+SN N
Sbjct: 105 RGSSNHMESQLQFTGIMSNRPEEN 128
>Os04g0602500 Similar to Pectin acetylesterase
Length = 466
Score = 90.9 bits (224), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 51/83 (61%)
Query: 32 VELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKTTE 91
V+++ L A GAVCLDGSPP YH G GSG ++WL+++EGG WC + CS R+
Sbjct: 101 VDMVFLKSAVSTGAVCLDGSPPVYHFSPGSGSGANNWLVHMEGGGWCRNAQECSVRQGNF 160
Query: 92 LGSSKLMEAQEFEGILSNNQTVN 114
GSSK M F GI+ NQ N
Sbjct: 161 RGSSKFMRPLSFSGIIGGNQRNN 183
>Os10g0550500 Similar to Pectinacetylesterase
Length = 211
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 31 VVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKTT 90
VV + LL A GAVCLDGSPP YHL RG G G W++ EGG WC+ SC+ R T
Sbjct: 28 VVGMTLLQAATSTGAVCLDGSPPAYHLHRGSGGGAGGWVLQFEGGGWCNDAPSCAERAGT 87
Query: 91 ELGSSKLMEAQE-FEGILSNNQTVN 114
GS++ M++ E F G+LSN+ +N
Sbjct: 88 RRGSTRSMDSLEVFSGLLSNDPDMN 112
>Os01g0319000 Similar to Pectin acetylesterase (Fragment)
Length = 418
Score = 80.9 bits (198), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 31 VVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKTT 90
+V + +L A +KGAVC+DG+PP YHL G G G SW++ LEGG WC+ +C R +
Sbjct: 57 MVPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTAS 116
Query: 91 ELGSSKLMEAQ-EFEGILSNNQTVN 114
GSS ME + F GI+S+ N
Sbjct: 117 RHGSSDHMERRIAFTGIMSSAAADN 141
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.134 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,581,078
Number of extensions: 145363
Number of successful extensions: 231
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 231
Number of HSP's successfully gapped: 10
Length of query: 119
Length of database: 17,035,801
Length adjustment: 85
Effective length of query: 34
Effective length of database: 12,597,611
Effective search space: 428318774
Effective search space used: 428318774
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 149 (62.0 bits)