BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0892400 Os01g0892400|J013050P15
(163 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0892400 Pectinacetylesterase family protein 267 3e-72
Os01g0892600 Pectinacetylesterase family protein 209 6e-55
Os05g0111900 Similar to Pectinacetylesterase precursor 148 2e-36
Os02g0702400 Pectinacetylesterase family protein 146 7e-36
Os01g0892500 Pectinacetylesterase family protein 146 8e-36
Os01g0974500 Pectinacetylesterase family protein 142 1e-34
Os07g0634600 Similar to Pectin acetylesterase (Fragment) 137 3e-33
Os04g0602500 Similar to Pectin acetylesterase 134 4e-32
Os10g0550500 Similar to Pectinacetylesterase 125 1e-29
Os01g0319000 Similar to Pectin acetylesterase (Fragment) 119 1e-27
>Os01g0892400 Pectinacetylesterase family protein
Length = 163
Score = 267 bits (682), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/163 (82%), Positives = 134/163 (82%)
Query: 1 MATSSKLRSPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVVELTLLAGAQEKGAVCLD 60
MATSSKLRSPV DVVELTLLAGAQEKGAVCLD
Sbjct: 1 MATSSKLRSPVLPRRRLAEPFLLLLLLLLLAAVARPTAAADVVELTLLAGAQEKGAVCLD 60
Query: 61 GSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKMGVYGSSKFMKAAEFNGILSN 120
GSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKMGVYGSSKFMKAAEFNGILSN
Sbjct: 61 GSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKMGVYGSSKFMKAAEFNGILSN 120
Query: 121 DQQLNSDFYNWNKVAIRYCDGASFSGDAEAQDKVDIFNSKSDF 163
DQQLNSDFYNWNKVAIRYCDGASFSGDAEAQDKVDIFNSKSDF
Sbjct: 121 DQQLNSDFYNWNKVAIRYCDGASFSGDAEAQDKVDIFNSKSDF 163
>Os01g0892600 Pectinacetylesterase family protein
Length = 396
Score = 209 bits (533), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 95/113 (84%), Positives = 103/113 (91%)
Query: 41 DVVELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKM 100
D VELTLL GA+EKGAVCLDGSPPGYHLQRGFGSGEHSW + L+GGAWCN+IE CS+RKM
Sbjct: 28 DGVELTLLTGAREKGAVCLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCSKRKM 87
Query: 101 GVYGSSKFMKAAEFNGILSNDQQLNSDFYNWNKVAIRYCDGASFSGDAEAQDK 153
YGSSKFM+A EFNGILSNDQQLNSDFYNWN+V IRYCDGASFSGD EAQD+
Sbjct: 88 SAYGSSKFMRAVEFNGILSNDQQLNSDFYNWNRVFIRYCDGASFSGDGEAQDQ 140
>Os05g0111900 Similar to Pectinacetylesterase precursor
Length = 203
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 89/120 (74%), Gaps = 3/120 (2%)
Query: 41 DVVELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKM 100
++V LTL+ A+EKGAVCLDGS PGYHLQRG G+G +WL+ LEGG WC ++ SC+ R+
Sbjct: 40 NLVGLTLVRRAKEKGAVCLDGSAPGYHLQRGSGTGSQNWLLHLEGGGWCRNLRSCASRQK 99
Query: 101 GVYGSSKFMKAA-EFNGILSNDQQLNSDFYNWNKVAIRYCDGASFSGDA--EAQDKVDIF 157
V GSS++M+ EF GILSND+ N DFYNWNKV IRYCDGASFSG+ E Q+ F
Sbjct: 100 SVLGSSQYMECQIEFAGILSNDKFQNPDFYNWNKVKIRYCDGASFSGNVKNELQNGTKFF 159
>Os02g0702400 Pectinacetylesterase family protein
Length = 397
Score = 146 bits (368), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 41 DVVELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKM 100
D V++T +A A KGAVCLDGSPP YHL RGFGSG +SWLV EGG WC+++ +C +RK
Sbjct: 25 DFVDITYVASAVAKGAVCLDGSPPAYHLARGFGSGVNSWLVHFEGGGWCSNVTTCLQRKR 84
Query: 101 GVYGSSKFM-KAAEFNGILSNDQQLNSDFYNWNKVAIRYCDGASFSGDAEAQD 152
GSSK M K F+GILSN N DFYNWNKV +RYCDG+SF+GD E D
Sbjct: 85 TRLGSSKQMAKQIAFSGILSNTPDYNPDFYNWNKVKVRYCDGSSFTGDVEKVD 137
>Os01g0892500 Pectinacetylesterase family protein
Length = 119
Score = 146 bits (368), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 67/86 (77%), Positives = 74/86 (86%)
Query: 41 DVVELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKM 100
DVVEL LL GAQEKGAVCLDGSPPGYHLQRGFGSGEHSWL++LEGG WC++IESCS RK
Sbjct: 30 DVVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKT 89
Query: 101 GVYGSSKFMKAAEFNGILSNDQQLNS 126
GSSK M+A EF GILSN+Q +NS
Sbjct: 90 TELGSSKLMEAQEFEGILSNNQTVNS 115
>Os01g0974500 Pectinacetylesterase family protein
Length = 430
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
Query: 42 VVELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKMG 101
+V+LTL+ GA+EKGAVCLDG+PPGYH GFG G + WL+ LEGG+WC + SC RK
Sbjct: 58 LVDLTLVHGAKEKGAVCLDGTPPGYHWLPGFGDGSNKWLLHLEGGSWCRNRTSCDHRKKT 117
Query: 102 VYGSSKFMKA-AEFNGILSNDQQLNSDFYNWNKVAIRYCDGASFSGDAEAQDK 153
GSS +M+ EF GILS+D+ N DFYNWNKV IRYCDGAS SG+ + + +
Sbjct: 118 SLGSSAYMETRVEFVGILSDDKAQNPDFYNWNKVKIRYCDGASLSGNVQDEHQ 170
>Os07g0634600 Similar to Pectin acetylesterase (Fragment)
Length = 411
Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Query: 43 VELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKMGV 102
V +TL+ A KGAVCLDGS PGYHL RGFGSG +SWLV LEGG WCN ++SC RK
Sbjct: 45 VGITLIQSAAAKGAVCLDGSLPGYHLHRGFGSGANSWLVNLEGGGWCNDVKSCVFRKSSR 104
Query: 103 YGSSKFMKAA-EFNGILSNDQQLNSDFYNWNKVAIRYCDGASFSGD 147
GSS M++ +F GI+SN + N DFYNWN+V +RYCDG SF+GD
Sbjct: 105 RGSSNHMESQLQFTGIMSNRPEENPDFYNWNRVKVRYCDGGSFTGD 150
>Os04g0602500 Similar to Pectin acetylesterase
Length = 466
Score = 134 bits (336), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 75/107 (70%)
Query: 43 VELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKMGV 102
V++ L A GAVCLDGSPP YH G GSG ++WLV +EGG WC + + CS R+
Sbjct: 101 VDMVFLKSAVSTGAVCLDGSPPVYHFSPGSGSGANNWLVHMEGGGWCRNAQECSVRQGNF 160
Query: 103 YGSSKFMKAAEFNGILSNDQQLNSDFYNWNKVAIRYCDGASFSGDAE 149
GSSKFM+ F+GI+ +Q+ N DFYNWN++ +RYCDG+SF+GD E
Sbjct: 161 RGSSKFMRPLSFSGIIGGNQRNNPDFYNWNRIKVRYCDGSSFTGDVE 207
>Os10g0550500 Similar to Pectinacetylesterase
Length = 211
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Query: 42 VVELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKMG 101
VV +TLL A GAVCLDGSPP YHL RG G G W++ EGG WCN SC+ R
Sbjct: 28 VVGMTLLQAATSTGAVCLDGSPPAYHLHRGSGGGAGGWVLQFEGGGWCNDAPSCAERAGT 87
Query: 102 VYGSSKFMKAAE-FNGILSNDQQLNSDFYNWNKVAIRYCDGASFSGDAEAQDKVDIF 157
GS++ M + E F+G+LSND +N DFYNWN+V +RYCDG SF+GD+E ++ +
Sbjct: 88 RRGSTRSMDSLEVFSGLLSNDPDMNPDFYNWNRVKLRYCDGGSFAGDSELRNGSSVL 144
>Os01g0319000 Similar to Pectin acetylesterase (Fragment)
Length = 418
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
Query: 42 VVELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKMG 101
+V +T+L A +KGAVC+DG+PP YHL G G G SW+V LEGG WCN+ +C R
Sbjct: 57 MVPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTAS 116
Query: 102 VYGSSKFM-KAAEFNGILSNDQQLNSDFYNWNKVAIRYCDGASFSGDA 148
+GSS M + F GI+S+ N DF++WN+V IRYCD SF+GDA
Sbjct: 117 RHGSSDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDA 164
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,014,712
Number of extensions: 203361
Number of successful extensions: 381
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 374
Number of HSP's successfully gapped: 10
Length of query: 163
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 70
Effective length of database: 12,179,899
Effective search space: 852592930
Effective search space used: 852592930
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 152 (63.2 bits)