BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0660300 Os01g0660300|AK106457
(312 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0660300 Similar to Pyruvate kinase 644 0.0
Os10g0571200 Similar to Pyruvate kinase isozyme G, chloropl... 405 e-113
Os07g0181000 Similar to Pyruvate kinase isozyme A, chloropl... 225 4e-59
Os03g0672300 Similar to Pyruvate kinase isozyme A, chloropl... 197 1e-50
Os01g0276700 Similar to Pyruvate kinase, cytosolic isozyme ... 148 6e-36
Os03g0325000 Pyruvate kinase family protein 144 6e-35
Os04g0677500 Pyruvate kinase (EC 2.7.1.40) 144 6e-35
Os11g0216000 Pyruvate kinase family protein 100 1e-21
Os12g0145700 Pyruvate kinase family protein 92 5e-19
Os11g0148500 Pyruvate kinase family protein 90 2e-18
>Os01g0660300 Similar to Pyruvate kinase
Length = 312
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/312 (100%), Positives = 312/312 (100%)
Query: 1 MLETGQEFTFTIKRGVGTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKC 60
MLETGQEFTFTIKRGVGTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKC
Sbjct: 1 MLETGQEFTFTIKRGVGTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKC 60
Query: 61 EVIDGGELKSRRHLNVRGKSATLPSITDKDWDDIKFGVENQVDYYAVSFVKDAQVVHELK 120
EVIDGGELKSRRHLNVRGKSATLPSITDKDWDDIKFGVENQVDYYAVSFVKDAQVVHELK
Sbjct: 61 EVIDGGELKSRRHLNVRGKSATLPSITDKDWDDIKFGVENQVDYYAVSFVKDAQVVHELK 120
Query: 121 DYLRSSNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIR 180
DYLRSSNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIR
Sbjct: 121 DYLRSSNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIR 180
Query: 181 MCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGFMAILLSHYRPSGTIFAFTD 240
MCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGFMAILLSHYRPSGTIFAFTD
Sbjct: 181 MCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGFMAILLSHYRPSGTIFAFTD 240
Query: 241 QERVRQRLALYQGVCPVQMEFSDDAEKTFGDALSYLLKHGMVKEGEEVALVQSGRQPIWR 300
QERVRQRLALYQGVCPVQMEFSDDAEKTFGDALSYLLKHGMVKEGEEVALVQSGRQPIWR
Sbjct: 241 QERVRQRLALYQGVCPVQMEFSDDAEKTFGDALSYLLKHGMVKEGEEVALVQSGRQPIWR 300
Query: 301 SQSTHNIQVRKV 312
SQSTHNIQVRKV
Sbjct: 301 SQSTHNIQVRKV 312
>Os10g0571200 Similar to Pyruvate kinase isozyme G, chloroplast (EC 2.7.1.40)
(Fragment)
Length = 570
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/227 (86%), Positives = 210/227 (92%)
Query: 1 MLETGQEFTFTIKRGVGTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKC 60
MLE GQEF FTIKRGV T+ VSVNYDDF+NDVEVGD+LLVDGGMMSL VKSKT D+VKC
Sbjct: 171 MLEEGQEFNFTIKRGVSTKDTVSVNYDDFINDVEVGDILLVDGGMMSLAVKSKTADTVKC 230
Query: 61 EVIDGGELKSRRHLNVRGKSATLPSITDKDWDDIKFGVENQVDYYAVSFVKDAQVVHELK 120
EV+DGGELKSRRHLNVRGKSATLPSIT+KDW+DIKFGVEN VD+YAVSFVKDA+V+HELK
Sbjct: 231 EVVDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVENGVDFYAVSFVKDAKVIHELK 290
Query: 121 DYLRSSNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIR 180
DYL+S+NADIHVI KIESADSIPNL SII ASDGAMVARGDLGAELPIEEVPLLQEEI+R
Sbjct: 291 DYLKSANADIHVIPKIESADSIPNLQSIIAASDGAMVARGDLGAELPIEEVPLLQEEIVR 350
Query: 181 MCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGFMAILLS 227
CRSM K VIVATNMLESMI HPTPTRAEVSDIAIAVREG AI+LS
Sbjct: 351 TCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGSDAIMLS 397
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 80/100 (80%)
Query: 213 IAIAVREGFMAILLSHYRPSGTIFAFTDQERVRQRLALYQGVCPVQMEFSDDAEKTFGDA 272
I + R G MA+LLSHYRPS TIFAFT++ERV+QRLALYQGV P+ M+FSDDAE+TF A
Sbjct: 469 IIVFTRTGSMAVLLSHYRPSSTIFAFTNEERVKQRLALYQGVVPIYMKFSDDAEETFSRA 528
Query: 273 LSYLLKHGMVKEGEEVALVQSGRQPIWRSQSTHNIQVRKV 312
+S LL VKEG+ V LVQSG + IWR +STH+IQVRKV
Sbjct: 529 ISSLLNAQFVKEGDYVTLVQSGVKSIWREESTHHIQVRKV 568
>Os07g0181000 Similar to Pyruvate kinase isozyme A, chloroplast precursor (EC
2.7.1.40)
Length = 561
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 160/236 (67%), Gaps = 11/236 (4%)
Query: 3 ETGQEFTFTIK--RGVGTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKC 60
E G+ +TF+++ E + VNY+ F DV VGD LLVDGGM V K VKC
Sbjct: 166 EDGEIWTFSVRSFEAPPPERTIHVNYEGFAEDVRVGDELLVDGGMARFEVVEKLGPDVKC 225
Query: 61 EVIDGGELKSRRHLN-------VRGKSATLPSITDKDWDDIKFGVENQVDYYAVSFVKDA 113
D G L R +L VR ++A LP+I+ KDW DI FG+ VD+ AVSFVK A
Sbjct: 226 RCTDPGLLLPRANLTFWRDGSIVRERNAMLPTISSKDWLDIDFGISEGVDFIAVSFVKSA 285
Query: 114 QVVHELKDYL--RSSNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEV 171
+V++ LK Y+ RS +DI VI KIES DS+ NL II ASDGAMVARGD+GA++P+E+V
Sbjct: 286 EVINHLKSYIAARSRGSDIAVIAKIESIDSLKNLEEIIRASDGAMVARGDMGAQIPLEQV 345
Query: 172 PLLQEEIIRMCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGFMAILLS 227
P +Q++I+++CR + K VIVA+ +LESMI +PTPTRAEV+D++ AVR+ A++LS
Sbjct: 346 PSVQQKIVKLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLS 401
>Os03g0672300 Similar to Pyruvate kinase isozyme A, chloroplast precursor (EC
2.7.1.40)
Length = 550
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 151/233 (64%), Gaps = 8/233 (3%)
Query: 3 ETGQEFTFTIKRGVGTET-CVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCE 61
E G E+ FT KR + + VN+D F D+ VGD L++DGGM + V K + ++C+
Sbjct: 147 EDGSEWLFTSKRTDESHPFTMHVNFDKFSEDILVGDELVIDGGMATFEVIEKVGNDLRCK 206
Query: 62 VIDGGELKSRRHLNV--RGK----SATLPSITDKDWDDIKFGVENQVDYYAVSFVKDAQV 115
D G L R L+ GK + LP+++ KDW DI+FG+ VD A+SFVKDA
Sbjct: 207 CTDPGLLLPRAKLSFWRNGKLVERNFGLPTLSAKDWADIEFGIAEGVDCIALSFVKDAND 266
Query: 116 VHELKDYL-RSSNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLL 174
+ LK YL R S I + K+ES +S+ NL II ASDG MVARGDLG ++P+E++P +
Sbjct: 267 IKYLKTYLSRKSLEHIKIFAKVESLESLKNLKDIIEASDGVMVARGDLGVQIPLEQIPAI 326
Query: 175 QEEIIRMCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGFMAILLS 227
QE I+ +CR + K VIVA+ +LESM+ +PTPTRAEV+D++ AVR+ A++LS
Sbjct: 327 QEAIVDLCRRLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADAVMLS 379
>Os01g0276700 Similar to Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK)
Length = 510
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 137/236 (58%), Gaps = 4/236 (1%)
Query: 2 LETGQEFTFTIKRGV-GTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLV--KSKTEDSV 58
L+ GQE T + + G + +S++Y D++ G ++L G ++L V K + V
Sbjct: 102 LKKGQEITVSTDYSIKGDDNMISMSYKKLAVDLKPGSVILCADGTITLTVLHCDKEQGLV 161
Query: 59 KCEVIDGGELKSRRHLNVRGKSATLPSITDKDWDDI-KFGVENQVDYYAVSFVKDAQVVH 117
+C + L R+++N+ G LP++T+KD +DI K+GV N++D A+SFV+ +
Sbjct: 162 RCRCENTAMLGERKNVNLPGVIVDLPTLTEKDKEDILKWGVPNKIDMIALSFVRKGSDLV 221
Query: 118 ELKDYLRSSNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEE 177
E++ L I ++ K+E+ + + N I+ SD MVARGDLG E+PIE++ Q+
Sbjct: 222 EVRKVLGKHAKSIMLMSKVENQEGVANFDDILAQSDAFMVARGDLGMEIPIEKIFYAQKV 281
Query: 178 IIRMCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGFMAILLSHYRPSG 233
+I C GK V+ AT MLESMI P PTRAE +D+A AV +G ++LS +G
Sbjct: 282 MIFKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGETAAG 337
>Os03g0325000 Pyruvate kinase family protein
Length = 432
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 140/256 (54%), Gaps = 6/256 (2%)
Query: 2 LETGQEFTFTIKRGV-GTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSK--TEDSV 58
L+ G+E T TI + G E +S++Y D++ G +L G ++L V S + V
Sbjct: 71 LKQGKEITITIDYSIKGDENLISMSYHKLAIDLKPGSTILCADGTITLTVLSCDCEQGLV 130
Query: 59 KCEVIDGGELKSRRHLNVRGKSATLPSITDKDWDDI-KFGVENQVDYYAVSFVKDAQVVH 117
+C + L R+++N+ G LP++T+KD DI ++GV N++D A+SFV+ +
Sbjct: 131 RCRCENSAMLGERKNVNLPGVIVDLPTLTEKDKVDILQWGVPNKIDMIALSFVRKGSDLM 190
Query: 118 ELKDYLRSSNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEE 177
++ L I ++ K+E+ + + N+ II SD MVARGDLG E+PIE++ Q+
Sbjct: 191 LVRSVLGEHAKSILLMSKVENQEGVANVDEIIANSDAFMVARGDLGMEIPIEKIFYAQKV 250
Query: 178 IIRMCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGFMAILLSHYRPSGTI-- 235
+I C GK V+ AT MLESMI P PTRAE +D+A AV +G ++ S +G
Sbjct: 251 MIHKCNIHGKPVVTATQMLESMIKSPCPTRAEATDVANAVLDGTDCVMFSGETAAGAYPE 310
Query: 236 FAFTDQERVRQRLALY 251
A + R LY
Sbjct: 311 LAVQTMANICSRAELY 326
>Os04g0677500 Pyruvate kinase (EC 2.7.1.40)
Length = 511
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 134/236 (56%), Gaps = 4/236 (1%)
Query: 2 LETGQEFTFTIKRGV-GTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKS--KTEDSV 58
L GQE T T + G E ++++Y DV+ G+++L G +SL V S +V
Sbjct: 104 LTKGQELTVTTDYEIKGDENMITMSYKKLPVDVKPGNVILCADGTISLTVLSCDPKAGTV 163
Query: 59 KCEVIDGGELKSRRHLNVRGKSATLPSITDKDWDDI-KFGVENQVDYYAVSFVKDAQVVH 117
+C + L R++ N+ G LP++T+KD +DI +GV N +D A+SFV+ +
Sbjct: 164 RCRCENTAMLGERKNCNLPGIVVDLPTLTEKDKEDILGWGVPNDIDMIALSFVRKGSDLV 223
Query: 118 ELKDYLRSSNADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEE 177
++ L I ++ K+E+ + + N I+ +D MVARGDLG E+P+E++ L Q+
Sbjct: 224 TVRQLLGQHAKRIKLMSKVENQEGVVNFDEILRETDAFMVARGDLGMEIPVEKIFLAQKM 283
Query: 178 IIRMCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGFMAILLSHYRPSG 233
+I C GK V+ AT MLESMI P PTRAE +D+A AV +G ++LS +G
Sbjct: 284 MIYKCNLAGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAG 339
>Os11g0216000 Pyruvate kinase family protein
Length = 527
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 127/238 (53%), Gaps = 15/238 (6%)
Query: 2 LETGQEFTFT--IKRGVGTETCVSVNYDDFVNDVEVGDMLLVDGGMMS--------LLVK 51
L+ G T T + + +E + + + V+ GD L + + + L V
Sbjct: 110 LKAGNHVTITPDLSKAPSSE-ILPIKFGGLAKAVKKGDTLFIGQYLFTGSETTSSWLEVV 168
Query: 52 SKTEDSVKCEVIDGGELKSRRH-LNVRGKSATLPSITDKDWDDIK-FGVENQVDYYAVSF 109
+ ++V+C V + L L+V +LP+++D D + I +G+ N VD ++S
Sbjct: 169 ETSGENVECLVTNTATLAGPMFTLHVSKAHVSLPTLSDYDKEVISTWGLHNSVDIISLSH 228
Query: 110 VKDAQVVHELKDYLRSSN-ADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPI 168
+ A+ V EL+ +L+S D + K+E+ + + + I+ +DG +++RGDLG +LP
Sbjct: 229 TRSAEDVRELRSFLQSHGLQDTQIYAKVENTEGLDHFDEILQEADGVIISRGDLGIDLPP 288
Query: 169 EEVPLLQEEIIRMCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGFMAILL 226
E+V + Q+ I+ C GK VI+ T +++SMI + PTRAE +D+A AV +G ILL
Sbjct: 289 EDVFISQKTAIKKCNLAGKPVII-TRVVDSMIDNLRPTRAEATDVANAVLDGTDGILL 345
>Os12g0145700 Pyruvate kinase family protein
Length = 527
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 114/217 (52%), Gaps = 13/217 (5%)
Query: 22 VSVNYDDFVNDVEVGDMLLVDGGMMS--------LLVKSKTEDSVKCEVIDGGELK-SRR 72
+ +N+ V+ GD + V + + L V D V C + + L S
Sbjct: 131 LPINFAGLAKAVKPGDTIFVGQYLFTGSETTSVWLEVSQIKGDDVVCVIKNTATLAGSLF 190
Query: 73 HLNVRGKSATLPSITDKDWDDI-KFGVENQVDYYAVSFVKDAQVVHELKDYLRSSN--AD 129
L+ LP+++D+D + I K+G N++D+ ++S+ + + V + +++L +
Sbjct: 191 TLHCSQIHIDLPTLSDEDKEVIRKWGAPNKIDFLSLSYTRHVEDVRQAREFLSKLGDLSQ 250
Query: 130 IHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRMCRSMGKAV 189
+ KIE+ + + N I+ +DG +++RG+LG +LP E+V L Q+ + C GK
Sbjct: 251 TQIFAKIENVEGLNNFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALHKCNMAGKPA 310
Query: 190 IVATNMLESMIVHPTPTRAEVSDIAIAVREGFMAILL 226
+V T +++SM + PTRAE +D+A AV +G AILL
Sbjct: 311 VV-TRVVDSMTDNLRPTRAEATDVANAVLDGSDAILL 346
>Os11g0148500 Pyruvate kinase family protein
Length = 527
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 92/147 (62%), Gaps = 4/147 (2%)
Query: 83 LPSITDKDWDDIK-FGVENQVDYYAVSFVKDAQVVHELKDYLRSSN--ADIHVIVKIESA 139
LP+++D+D + I+ +G N++D+ ++S+ + A+ V + +++L + + KIE+
Sbjct: 201 LPTLSDEDKEVIRRWGAPNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTQIFAKIENV 260
Query: 140 DSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRMCRSMGKAVIVATNMLESM 199
+ + + I+ +DG +++RG+LG +LP E+V L Q+ + C GK +V T +++SM
Sbjct: 261 EGLNHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALHKCNMAGKPAVV-TRVVDSM 319
Query: 200 IVHPTPTRAEVSDIAIAVREGFMAILL 226
+ PTRAE +D+A AV +G AILL
Sbjct: 320 TDNLRPTRAEATDVANAVLDGSDAILL 346
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,044,425
Number of extensions: 409051
Number of successful extensions: 863
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 852
Number of HSP's successfully gapped: 11
Length of query: 312
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 211
Effective length of database: 11,762,187
Effective search space: 2481821457
Effective search space used: 2481821457
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)