BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0319000 Os01g0319000|AK107088
         (418 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0319000  Similar to Pectin acetylesterase (Fragment)         796   0.0  
Os07g0634600  Similar to Pectin acetylesterase (Fragment)         463   e-131
Os02g0702400  Pectinacetylesterase family protein                 400   e-112
Os04g0602500  Similar to Pectin acetylesterase                    399   e-111
Os01g0974500  Pectinacetylesterase family protein                 393   e-109
Os01g0892600  Pectinacetylesterase family protein                 348   3e-96
Os10g0550500  Similar to Pectinacetylesterase                     201   1e-51
Os05g0111900  Similar to Pectinacetylesterase precursor           157   1e-38
Os01g0892400  Pectinacetylesterase family protein                 118   7e-27
Os01g0892500  Pectinacetylesterase family protein                  82   1e-15
>Os01g0319000 Similar to Pectin acetylesterase (Fragment)
          Length = 418

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/418 (93%), Positives = 389/418 (93%)

Query: 1   MAMMERIGVTKXXXXXXXXXXXXXXXXXXXXSVQAAEEDEMSGXXXXXXXXXAADVMVPI 60
           MAMMERIGVTK                    SVQAAEEDEMSG         AADVMVPI
Sbjct: 1   MAMMERIGVTKLHHHLLLLVLLLVVAAAGGGSVQAAEEDEMSGRRRRSRRRRAADVMVPI 60

Query: 61  TILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTASRHGS 120
           TILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTASRHGS
Sbjct: 61  TILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTASRHGS 120

Query: 121 SDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDAFNEGLKLQFRGQRIWG 180
           SDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDAFNEGLKLQFRGQRIWG
Sbjct: 121 SDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDAFNEGLKLQFRGQRIWG 180

Query: 181 AVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDGGLFLDAVD 240
           AVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDGGLFLDAVD
Sbjct: 181 AVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDGGLFLDAVD 240

Query: 241 VAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATSCFFPQNIIDGIKTPIFLLNAAYDV 300
           VAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATSCFFPQNIIDGIKTPIFLLNAAYDV
Sbjct: 241 VAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATSCFFPQNIIDGIKTPIFLLNAAYDV 300

Query: 301 WQIEQSLAPNAADTSGTWRVCKFNRAACNASQLQFLQGFRDQMVAAVRVFSESRSNGLFI 360
           WQIEQSLAPNAADTSGTWRVCKFNRAACNASQLQFLQGFRDQMVAAVRVFSESRSNGLFI
Sbjct: 301 WQIEQSLAPNAADTSGTWRVCKFNRAACNASQLQFLQGFRDQMVAAVRVFSESRSNGLFI 360

Query: 361 NSCFAHCQSELTATWNGGSPALQNKGIAKSVGDWYFGRAEVKAIDCPYPCDKTCHNII 418
           NSCFAHCQSELTATWNGGSPALQNKGIAKSVGDWYFGRAEVKAIDCPYPCDKTCHNII
Sbjct: 361 NSCFAHCQSELTATWNGGSPALQNKGIAKSVGDWYFGRAEVKAIDCPYPCDKTCHNII 418
>Os07g0634600 Similar to Pectin acetylesterase (Fragment)
          Length = 411

 Score =  463 bits (1192), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 211/363 (58%), Positives = 266/363 (73%), Gaps = 1/363 (0%)

Query: 56  VMVPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTA 115
           V V IT++ SA  KGAVC+DG+ P YHL  G G G  SW+VNLEGGGWCN+ ++C FR +
Sbjct: 43  VFVGITLIQSAAAKGAVCLDGSLPGYHLHRGFGSGANSWLVNLEGGGWCNDVKSCVFRKS 102

Query: 116 SRHGSSDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDAFNEGLKLQFRG 175
           SR GSS+HME ++ FTGIMS+   +NPDF++WNRVK+RYCD GSF GD  +    L FRG
Sbjct: 103 SRRGSSNHMESQLQFTGIMSNRPEENPDFYNWNRVKVRYCDGGSFTGDGADASAGLYFRG 162

Query: 176 QRIWGAVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDGGLF 235
           QRIW A +  L+  GM  A   LL+GCSAGG++ ILHCD+ R L   +  VKCL+D G+F
Sbjct: 163 QRIWQAAMDDLMAQGMRYANQALLSGCSAGGVSTILHCDEFRGLFSGSTNVKCLADAGMF 222

Query: 236 LDAVDVAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATSCFFPQNIIDGIKTPIFLLN 295
           LD VDV+G R +R ++  +V LQ    +LP +CT  +D TSCFFPQN++  I+TP F+LN
Sbjct: 223 LDFVDVSGQREMRDFFNGIVRLQGSGRSLPRSCTSRMDKTSCFFPQNVVPNIQTPTFILN 282

Query: 296 AAYDVWQIEQSLAPNAADTSGTWRVCKFNRAACNASQLQFLQGFRDQMVAAVRVFSESRS 355
            AYDVWQ++QS+AP  AD  G WR C+ N A+CN++QLQFLQGFR+QM+ AVR FS +R 
Sbjct: 283 TAYDVWQLQQSVAPKRADPQGLWRGCRMNHASCNSNQLQFLQGFRNQMLDAVRGFSGARQ 342

Query: 356 NGLFINSCFAHCQSELTATWNGG-SPALQNKGIAKSVGDWYFGRAEVKAIDCPYPCDKTC 414
           NGLFINSCFAHCQSE   TW  G SP L NK IA++VGDW+F RA+ K  DC YPCD TC
Sbjct: 343 NGLFINSCFAHCQSERQDTWYAGDSPRLGNKRIAEAVGDWFFDRADAKYTDCAYPCDGTC 402

Query: 415 HNI 417
           H++
Sbjct: 403 HHL 405
>Os02g0702400 Pectinacetylesterase family protein
          Length = 397

 Score =  400 bits (1029), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 190/365 (52%), Positives = 237/365 (64%), Gaps = 3/365 (0%)

Query: 57  MVPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTAS 116
            V IT + SAV KGAVC+DG+PPAYHL  G G G  SW+V+ EGGGWC+N  TC  R  +
Sbjct: 26  FVDITYVASAVAKGAVCLDGSPPAYHLARGFGSGVNSWLVHFEGGGWCSNVTTCLQRKRT 85

Query: 117 RHGSSDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDA--FNEGLKLQFR 174
           R GSS  M ++IAF+GI+S+    NPDF++WN+VK+RYCD  SF GD    +   KL +R
Sbjct: 86  RLGSSKQMAKQIAFSGILSNTPDYNPDFYNWNKVKVRYCDGSSFTGDVEKVDPATKLHYR 145

Query: 175 GQRIWGAVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDGGL 234
           G R+W AV+  LL  GM SA + L++GCSAGGL +ILHCD+ R L P    VKCLSD G 
Sbjct: 146 GARVWQAVMDDLLAKGMNSANNALISGCSAGGLTSILHCDRFRDLFPVDTKVKCLSDAGF 205

Query: 235 FLDAVDVAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATSCFFPQNIIDGIKTPIFLL 294
           F++  D+AG   + +++  V      A NLP  CT  L    CFFPQN +  I+TP+F+L
Sbjct: 206 FINEKDIAGVEYIVAFFNGVATTHGSAKNLPSACTSRLSPGMCFFPQNEVKQIQTPLFIL 265

Query: 295 NAAYDVWQIEQSLAPNAADTSGTWRVCKFNRAACNASQLQFLQGFRDQMVAAVRVFSESR 354
           NAAYD WQ+   L P  AD  G W  CK +   C ASQLQ LQGFRD  + A++      
Sbjct: 266 NAAYDSWQVRNILVPGFADPHGKWHSCKHDIDQCPASQLQILQGFRDDFLKALKEQGTPS 325

Query: 355 SNGLFINSCFAHCQSELTATW-NGGSPALQNKGIAKSVGDWYFGRAEVKAIDCPYPCDKT 413
           + GLFINSCF HCQSE   TW   GSP L+ K IA +VGDW++ R   + IDCPYPCD T
Sbjct: 326 TRGLFINSCFVHCQSETQETWFASGSPMLETKTIADAVGDWFYDRNPFQKIDCPYPCDST 385

Query: 414 CHNII 418
           CHN I
Sbjct: 386 CHNRI 390
>Os04g0602500 Similar to Pectin acetylesterase
          Length = 466

 Score =  399 bits (1024), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 186/363 (51%), Positives = 242/363 (66%), Gaps = 5/363 (1%)

Query: 58  VPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTASR 117
           V +  L SAV  GAVC+DG+PP YH  PGSG G  +W+V++EGGGWC NA+ C  R  + 
Sbjct: 101 VDMVFLKSAVSTGAVCLDGSPPVYHFSPGSGSGANNWLVHMEGGGWCRNAQECSVRQGNF 160

Query: 118 HGSSDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGD--AFNEGLKLQFRG 175
            GSS  M R ++F+GI+     +NPDF++WNR+K+RYCD  SF GD         L FRG
Sbjct: 161 RGSSKFM-RPLSFSGIIGGNQRNNPDFYNWNRIKVRYCDGSSFTGDVETVETSTNLHFRG 219

Query: 176 QRIWGAVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDGGLF 235
            R+W A+I+ LL  GM+ A++ LL+GCSAGGLAAILHCDQ R LLPA A VKC SD G F
Sbjct: 220 ARVWNAIIEDLLAKGMSKAQNALLSGCSAGGLAAILHCDQFRDLLPATANVKCFSDAGFF 279

Query: 236 LDAVDVAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATSCFFPQNIIDGIKTPIFLLN 295
           +D  D+ G   +R++Y DVV L   A NLP +CT  +    CFFPQN++  ++TP+F+LN
Sbjct: 280 VDGKDITGNDFVRTFYKDVVNLHGSAKNLPSSCTSKMSPDLCFFPQNVVPTLRTPLFILN 339

Query: 296 AAYDVWQIEQSLAPNAADTSGTWRVCKFNRAACNASQLQFLQGFRDQMVAAVRVFSESRS 355
           AAYD WQI+  LAP+AAD   TW  CK +  AC++SQL  LQ FR   +AA+    +S +
Sbjct: 340 AAYDAWQIKNVLAPSAADKKKTWAKCKLDITACSSSQLTTLQNFRTDFLAALPKPEQSPA 399

Query: 356 N-GLFINSCFAHCQSELTATWNG-GSPALQNKGIAKSVGDWYFGRAEVKAIDCPYPCDKT 413
           N  +FI+SC+AHCQS    TW   GSP ++   I K+VGDW+  R   + IDCPYPC+ T
Sbjct: 400 NLSIFIDSCYAHCQSGSQDTWLAQGSPVVEKTQIGKAVGDWFHDREVSRRIDCPYPCNPT 459

Query: 414 CHN 416
           C N
Sbjct: 460 CKN 462
>Os01g0974500 Pectinacetylesterase family protein
          Length = 430

 Score =  393 bits (1010), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 178/367 (48%), Positives = 242/367 (65%), Gaps = 5/367 (1%)

Query: 56  VMVPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTA 115
            +V +T+++ A +KGAVC+DGTPP YH  PG G G+  W+++LEGG WC N  +C  R  
Sbjct: 57  TLVDLTLVHGAKEKGAVCLDGTPPGYHWLPGFGDGSNKWLLHLEGGSWCRNRTSCDHRKK 116

Query: 116 SRHGSSDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDAFNE---GLKLQ 172
           +  GSS +ME R+ F GI+S   A NPDF++WN+VKIRYCD  S +G+  +E   G    
Sbjct: 117 TSLGSSAYMETRVEFVGILSDDKAQNPDFYNWNKVKIRYCDGASLSGNVQDEHQYGATFF 176

Query: 173 FRGQRIWGAVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDG 232
           FRGQRIW AV+  LL  G+A A+   LTGCSAGGL+  +HCD  RALLP  +TVKCL+DG
Sbjct: 177 FRGQRIWEAVMAELLPKGLARAKQAFLTGCSAGGLSTYIHCDDFRALLPKDSTVKCLADG 236

Query: 233 GLFLDAVDVAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATSCFFPQNIIDGIKTPIF 292
           G FLD  D++G R +R +Y DV   Q +    P  C+  ++   CFFPQ +  GI TP+F
Sbjct: 237 GFFLDVEDISGRRYMRGFYNDVARQQDLRKRFP-GCSSDMEPGQCFFPQEVAKGITTPMF 295

Query: 293 LLNAAYDVWQIEQSLAPNAADTSGTWRVCKFNRAACNASQLQFLQGFRDQMVAAVRVFSE 352
           +LN AYDVWQ+E  L P+ +D    W+ C+ +   CN  QL+ LQGFR  ++ A+  F +
Sbjct: 296 ILNPAYDVWQVEHVLTPDGSDPQNLWQDCRMDITKCNTKQLEILQGFRKSLLDAISEFKK 355

Query: 353 SRSNGLFINSCFAHCQSELTATWNGGSPA-LQNKGIAKSVGDWYFGRAEVKAIDCPYPCD 411
            R  G+FI+SCF HCQS  +  W+  S + + NK +A++VGDW+F R EVK IDC YPC+
Sbjct: 356 KRGWGMFIDSCFIHCQSMKSLAWHSPSASRINNKTVAEAVGDWFFDRREVKEIDCEYPCN 415

Query: 412 KTCHNII 418
            TC N++
Sbjct: 416 PTCFNVV 422
>Os01g0892600 Pectinacetylesterase family protein
          Length = 396

 Score =  348 bits (894), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 167/362 (46%), Positives = 225/362 (62%), Gaps = 6/362 (1%)

Query: 58  VPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTASR 117
           V +T+L  A +KGAVC+DG+PP YHL  G G G  SW ++L+GG WCN    C  R  S 
Sbjct: 30  VELTLLTGAREKGAVCLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCSKRKMSA 89

Query: 118 HGSSDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDAF---NEGLKLQFR 174
           +GSS  M R + F GI+S+    N DF++WNRV IRYCD  SF+GD      +G  L FR
Sbjct: 90  YGSSKFM-RAVEFNGILSNDQQLNSDFYNWNRVFIRYCDGASFSGDGEAQDQDGSTLHFR 148

Query: 175 GQRIWGAVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDGGL 234
           G RIW AVI  L+  G+A+A+  +L+GCSAGGLAA+LHC+   A      + KCL D G 
Sbjct: 149 GLRIWEAVINELMGKGLATAKQAILSGCSAGGLAALLHCNDFYARFSKEVSAKCLPDAGF 208

Query: 235 FLDAVDVAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATSCFFPQNIIDGIKTPIFLL 294
           FLD  D++G R + S +   V LQ V   L + C    D T CFFP  ++  I  P  +L
Sbjct: 209 FLDIEDLSGERHMWSVFNGTVHLQNVTQVLSKDCLAKKDPTECFFPAELVKSITAPTLIL 268

Query: 295 NAAYDVWQIEQSLAPNAADTSGTWRVCKFNRAACNASQLQFLQGFRDQMVAAVRVFSESR 354
           N+AYD WQI+ +LAP+ +    +W  CK +   C+++Q+Q   GFR++ V  + V  + +
Sbjct: 269 NSAYDSWQIQNALAPDGSFPGQSWSSCKTDIRNCSSTQIQVFNGFRNKFVDDIEVVKDKK 328

Query: 355 SNGLFINSCFAHCQSELTATWNG-GSPALQNKGIAKSVGDWYFGRA-EVKAIDCPYPCDK 412
             GLFI+SCF HCQ+    +WN   SP L NK +A+++GDWYF R+ EVK IDC YPC+ 
Sbjct: 329 DWGLFIDSCFTHCQTPFDISWNSQASPVLGNKIVAEAIGDWYFERSYEVKEIDCEYPCNP 388

Query: 413 TC 414
           TC
Sbjct: 389 TC 390
>Os10g0550500 Similar to Pectinacetylesterase
          Length = 211

 Score =  201 bits (510), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 103/184 (55%), Positives = 129/184 (70%), Gaps = 2/184 (1%)

Query: 56  VMVPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTA 115
           ++V +T+L +A   GAVC+DG+PPAYHL  GSGGG   WV+  EGGGWCN+A +C  R  
Sbjct: 27  LVVGMTLLQAATSTGAVCLDGSPPAYHLHRGSGGGAGGWVLQFEGGGWCNDAPSCAERAG 86

Query: 116 SRHGSSDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDA--FNEGLKLQF 173
           +R GS+  M+    F+G++S+    NPDF++WNRVK+RYCD GSFAGD+   N    L F
Sbjct: 87  TRRGSTRSMDSLEVFSGLLSNDPDMNPDFYNWNRVKLRYCDGGSFAGDSELRNGSSVLYF 146

Query: 174 RGQRIWGAVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRALLPAAATVKCLSDGG 233
           RGQRIW A+I  LL  G+A A+ VLL+GCSAGGLA   HCD L+  L  A TVKCLSD G
Sbjct: 147 RGQRIWDAIISDLLPKGLAKAQKVLLSGCSAGGLATFFHCDDLKGRLGDAVTVKCLSDAG 206

Query: 234 LFLD 237
            FLD
Sbjct: 207 FFLD 210
>Os05g0111900 Similar to Pectinacetylesterase precursor
          Length = 203

 Score =  157 bits (398), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 74/144 (51%), Positives = 101/144 (70%), Gaps = 3/144 (2%)

Query: 57  MVPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTAS 116
           +V +T++  A +KGAVC+DG+ P YHL  GSG G+++W+++LEGGGWC N R+C  R  S
Sbjct: 41  LVGLTLVRRAKEKGAVCLDGSAPGYHLQRGSGTGSQNWLLHLEGGGWCRNLRSCASRQKS 100

Query: 117 RHGSSDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDAFNE---GLKLQF 173
             GSS +ME +I F GI+S+    NPDF++WN+VKIRYCD  SF+G+  NE   G K  F
Sbjct: 101 VLGSSQYMECQIEFAGILSNDKFQNPDFYNWNKVKIRYCDGASFSGNVKNELQNGTKFFF 160

Query: 174 RGQRIWGAVIQHLLDVGMASAEHV 197
           RGQRIW AV+  LL  G+  A+ +
Sbjct: 161 RGQRIWEAVMSELLLKGLRHAKQL 184
>Os01g0892400 Pectinacetylesterase family protein
          Length = 163

 Score =  118 bits (296), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 55/108 (50%), Positives = 72/108 (66%), Gaps = 1/108 (0%)

Query: 57  MVPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTAS 116
           +V +T+L  A +KGAVC+DG+PP YHL  G G G  SW+V LEGG WCN+  +C  R   
Sbjct: 42  VVELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKMG 101

Query: 117 RHGSSDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSFAGDA 164
            +GSS  M +   F GI+S+    N DF++WN+V IRYCD  SF+GDA
Sbjct: 102 VYGSSKFM-KAAEFNGILSNDQQLNSDFYNWNKVAIRYCDGASFSGDA 148
>Os01g0892500 Pectinacetylesterase family protein
          Length = 119

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 57  MVPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGGWCNNARTCRFRTAS 116
           +V + +L  A +KGAVC+DG+PP YHL  G G G  SW++ LEGG WC+   +C  R  +
Sbjct: 31  VVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTIESCSNRKTT 90

Query: 117 RHGSSDHMERRIAFTGIMSSAAADN 141
             GSS  ME +  F GI+S+    N
Sbjct: 91  ELGSSKLMEAQ-EFEGILSNNQTVN 114
  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.135    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,726,019
Number of extensions: 667803
Number of successful extensions: 1423
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1405
Number of HSP's successfully gapped: 10
Length of query: 418
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 315
Effective length of database: 11,657,759
Effective search space: 3672194085
Effective search space used: 3672194085
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)