BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0232000 Os01g0232000|J075104N11
(251 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0232000 Major intrinsic protein family protein 328 2e-90
Os05g0231700 Similar to Tonoplast membrane integral protein... 186 1e-47
AK069192 185 2e-47
Os01g0232100 Similar to Tonoplast membrane integral protein... 176 2e-44
Os02g0658100 Similar to Tonoplast membrane integral protein... 150 1e-36
Os04g0550950 Major intrinsic protein family protein 147 9e-36
Os01g0975900 Similar to Tonoplast membrane integral protein... 144 9e-35
Os10g0492600 Similar to Tonoplast membrane integral protein... 129 2e-30
Os04g0527900 Similar to Tonoplast membrane integral protein... 118 5e-27
Os06g0336200 Similar to Delta tonoplast intrinsic protein TIP2 96 2e-20
Os04g0550800 Major intrinsic protein family protein 92 4e-19
Os03g0146100 Similar to Tonoplast intrinsic protein 87 1e-17
Os02g0232900 Similar to NOD26-like membrane integral protei... 67 1e-11
>Os01g0232000 Major intrinsic protein family protein
Length = 251
Score = 328 bits (842), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 179/251 (71%), Positives = 179/251 (71%)
Query: 1 MAKLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTIMGLTXXXX 60
MAKLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTIMGLT
Sbjct: 1 MAKLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTIMGLTAVAA 60
Query: 61 XXXXXXXXXXXXGLHVSGGHINPAVTLGLAAGGHITLFRXXXXXXXXXXXXXXXXXXXXX 120
GLHVSGGHINPAVTLGLAAGGHITLFR
Sbjct: 61 AHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAA 120
Query: 121 XTGGEEXXXXXXXXXXXXXXXXXXMEAVLTFSLLFAVYATVVDRRRXXXXXXXXXXXXXX 180
TGGEE MEAVLTFSLLFAVYATVVDRRR
Sbjct: 121 LTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRAVGALGPLLVGLVV 180
Query: 181 XXNILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPG 240
NILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPG
Sbjct: 181 GANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPG 240
Query: 241 HEPLPRNDGDF 251
HEPLPRNDGDF
Sbjct: 241 HEPLPRNDGDF 251
>Os05g0231700 Similar to Tonoplast membrane integral protein ZmTIP4-2
Length = 251
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 128/242 (52%), Gaps = 3/242 (1%)
Query: 9 HREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAA--KLGGGGDTIMGLTXXXXXXXXXX 66
H E D GC+RAV+AEL+LTF+FVF+GV + MAA ++ G + L
Sbjct: 10 HGEVVDAGCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAA 69
Query: 67 XXXXXXGLHVSGGHINPAVTLGLAAGGHITLFRXXXXXXXXXXXXXXXXXXXXXXTGGEE 126
G HVSGGH+NPAVT+ L A GHIT FR TGG
Sbjct: 70 GVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMA 129
Query: 127 XXXXXXXXXXXXXXXXXXMEAVLTFSLLFAVYATVVDRRRXXXXXXXXXXXXXXXXNILA 186
ME +LTFSLLF VYAT++D R N +A
Sbjct: 130 TPVHTLGSGIGPMQGLV-MEIILTFSLLFVVYATILDPRSSVPGFGPLLTGLIVGANTIA 188
Query: 187 GGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGHEPLPR 246
GG +SGASMNPARSFGPALA G W HWIYW+GPLIGGPLAGLVYE LF+ HEPL
Sbjct: 189 GGNFSGASMNPARSFGPALATGVWTHHWIYWLGPLIGGPLAGLVYESLFLVKRTHEPLLD 248
Query: 247 ND 248
N
Sbjct: 249 NS 250
>AK069192
Length = 149
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 96/130 (73%)
Query: 122 TGGEEXXXXXXXXXXXXXXXXXXMEAVLTFSLLFAVYATVVDRRRXXXXXXXXXXXXXXX 181
TGGEE MEAVLTFSLLFAVYATVVDRRR
Sbjct: 20 TGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRAVGALGPLLVGLVVG 79
Query: 182 XNILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGH 241
NILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGH
Sbjct: 80 ANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGH 139
Query: 242 EPLPRNDGDF 251
EPLPRNDGDF
Sbjct: 140 EPLPRNDGDF 149
>Os01g0232100 Similar to Tonoplast membrane integral protein ZmTIP4-3
Length = 256
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/252 (45%), Positives = 129/252 (51%), Gaps = 6/252 (2%)
Query: 1 MAKLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTIMGLTXXXX 60
M KL LGH EA +PGCLRAV ELL TFLFVF GV S + A K GG +T
Sbjct: 6 MTKLELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGKAAGGAGEAAAVTAAAM 65
Query: 61 XXXXXXXXXXXXGLHVSGGHINPAVTLGLAAGGHITLFRXXXXXXXXXXXXXXXXXXXXX 120
G HVSGGH+NPAVTL LA GGHITLFR
Sbjct: 66 AQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRC 125
Query: 121 XTGGEEXXXXXXXXXXXXXXXXXXMEAVLTFSLLFAVYATVVDRRRXXXXXXXXXXXXXX 180
TGG EAV TF+LL + AT++D RR
Sbjct: 126 LTGGAATPVHALADGVGPVQGVAA-EAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLL 184
Query: 181 X-XNILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPP 239
N +AGG +GASMNPARSFGPALA GEWA HW+YWVGPL GGPLA + YE LFM
Sbjct: 185 VGANTVAGGALTGASMNPARSFGPALATGEWAHHWVYWVGPLAGGPLAVVAYELLFMDVE 244
Query: 240 ----GHEPLPRN 247
H+PLP+
Sbjct: 245 DAGGAHQPLPQE 256
>Os02g0658100 Similar to Tonoplast membrane integral protein ZmTIP2-1
Length = 248
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 127/250 (50%), Gaps = 6/250 (2%)
Query: 1 MAKLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTI-MGLTXXX 59
M KLA G ++ ++A VAE + T LFVF+GVGSA+A +L GG GL
Sbjct: 1 MVKLAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIA 60
Query: 60 XXXXXXXXXXXXXGLHVSGGHINPAVTLGLAAGGHITLFRXXXXXXXXXXXXXXXXXXXX 119
++SGGH+NPAVT GLA GGHIT+
Sbjct: 61 IAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLK 120
Query: 120 XXTGGEEXXXXXXXXXXXXXXXXXXMEAVLTFSLLFAVYATVVDRRRXXXXXXX-XXXXX 178
T G+ ME V+TF+L++ VYAT D ++
Sbjct: 121 FVTHGKAIPTHGVAGISELEGVV--MEIVITFALVYTVYATAADPKKGSLGTIAPIAIGF 178
Query: 179 XXXXNILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGP 238
NILA GP+SG SMNPARSFGPA+AAG +A +W+YWVGPLIGG LAGLVY +F+G
Sbjct: 179 IVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIGGGLAGLVYGDVFIGS 238
Query: 239 PGHEPLPRND 248
++P+ D
Sbjct: 239 --YQPVADQD 246
>Os04g0550950 Major intrinsic protein family protein
Length = 249
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 124/250 (49%), Gaps = 6/250 (2%)
Query: 1 MAKLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGD-TIMGLTXXX 59
M KLA G ++ ++A VAE + T LFVF+GVGSA+A +L GG GL
Sbjct: 1 MVKLAFGSCGDSFSASSIKAYVAEFIATLLFVFAGVGSAIAYGQLTKGGALDPAGLVAIA 60
Query: 60 XXXXXXXXXXXXXGLHVSGGHINPAVTLGLAAGGHITLFRXXXXXXXXXXXXXXXXXXXX 119
++SGGH+NP VT GLA GGHIT+
Sbjct: 61 IAHAFALFVGVSMAANISGGHLNPVVTFGLAVGGHITILTGIFYWVAQLLGASVACLLCS 120
Query: 120 XXTGGEEXXXXXXXXXXXXXXXXXXMEAVLTFSLLFAVYATVVDRRRXXXXXXX-XXXXX 178
+ ME V+TF+L++ VYAT D ++
Sbjct: 121 SPPT-DRLAIPTHAIAGISEIEGMVMEIVITFALVYTVYATAADPKKGSLGTVAPMAIGF 179
Query: 179 XXXXNILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMG- 237
NILA GP+SG+SMNPARSFGPA+AAG +A +W+YWVGPLIGG LAGLVY+ +F+
Sbjct: 180 IVGANILAAGPFSGSSMNPARSFGPAVAAGNFAGNWVYWVGPLIGGGLAGLVYDDVFIAS 239
Query: 238 --PPGHEPLP 245
P G + P
Sbjct: 240 YQPVGQQEYP 249
>Os01g0975900 Similar to Tonoplast membrane integral protein ZmTIP1-2
Length = 252
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 123/250 (49%), Gaps = 3/250 (1%)
Query: 1 MAKLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKL-GGGGDTIMGLTXXX 59
++++A+G E + P +A VAE + +FVF+G GS MA +KL GGG T GL
Sbjct: 3 VSRIAVGAPGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAAS 62
Query: 60 XXXXXXXXXXXXXGLHVSGGHINPAVTLGLAAGGHITLFRXXXXXXXXXXXXXXXXXXXX 119
G ++SGGH+NPAVT G GG+I+L +
Sbjct: 63 LAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLK 122
Query: 120 XXTGGEEXXXXXXXXXXXXXXXXXXMEAVLTFSLLFAVYATVVDRRRXXXXXXX-XXXXX 178
TGG E V+TF L++ VYAT VD ++
Sbjct: 123 IATGGAAVGAFSLSAGVGAWNAVV-FEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGF 181
Query: 179 XXXXNILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGP 238
NILAGG + GASMNPA SFGPA+ G W +HW+YW+GP +G +A L+Y+ +F+G
Sbjct: 182 IVGANILAGGAFDGASMNPAVSFGPAVVTGVWDNHWVYWLGPFVGAAIAALIYDIIFIGQ 241
Query: 239 PGHEPLPRND 248
H+ LP D
Sbjct: 242 RPHDQLPTAD 251
>Os10g0492600 Similar to Tonoplast membrane integral protein ZmTIP3-1
Length = 264
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 117/254 (46%), Gaps = 9/254 (3%)
Query: 3 KLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTIMGLTXXXXXX 62
+ +G +AT P +RA ++E L T +FVF+ GS ++ KL T GL
Sbjct: 11 RFTVGRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAH 70
Query: 63 XXXXXXXXXXGLHVSGGHINPAVTLGLAAGGHITLFRXXXXXXXXXXXXXXXXXXXXXXT 122
+++SGGH+NPA+T G GG ++L R T
Sbjct: 71 ALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTT 130
Query: 123 GGEEXXXXXXXXXXXXXXXXXXMEAVLTFSLLFAVYATVVDRRRXXXXXXXXXXXXXXX- 181
GG +EA +TF L++A YATV+D +R
Sbjct: 131 GGMRPPGFALASGVGDWHAVL-LEATMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLG 189
Query: 182 XNILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFM----- 236
N+LAGGP+ GA MNPAR FGPAL W HW+YW+GP +G LAGL+YE L +
Sbjct: 190 ANMLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFVGAGLAGLLYEYLVIPSADA 249
Query: 237 GPPG--HEPLPRND 248
P G H+PL D
Sbjct: 250 APHGGAHQPLAPED 263
>Os04g0527900 Similar to Tonoplast membrane integral protein ZmTIP3-2
Length = 265
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 102/229 (44%), Gaps = 1/229 (0%)
Query: 11 EATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTIMGLTXXXXXXXXXXXXXX 70
E PG RA ++E + T +FVF+ GS K+ T+ GL
Sbjct: 21 EPLVPGATRAALSEFVATAVFVFAAEGSVYGLWKMYRDTGTLGGLLVVAVAHALALAAAV 80
Query: 71 XXGLHVSGGHINPAVTLGLAAGGHITLFRXXXXXXXXXXXXXXXXXXXXXXTGGEEXXXX 130
+ SGGH+NPAVT G+ G I+ R +GG
Sbjct: 81 AVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGF 140
Query: 131 XXXXXXXXXXXXXXMEAVLTFSLLFAVYATVVDRRRXXXXXXXXXXXXXXXXNILAGGPY 190
+E V+TF L++ VYAT VDRR NILAGGP+
Sbjct: 141 TLGHRIHERHALL-LEVVMTFGLVYTVYATAVDRRSGGGDIAPLAIGLVAGANILAGGPF 199
Query: 191 SGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPP 239
GA+MNPAR+FGPAL W HW+YW+GPLIG +AG +YE + P
Sbjct: 200 DGAAMNPARAFGPALVGWNWRHHWVYWLGPLIGAGMAGALYEFVMAEQP 248
>Os06g0336200 Similar to Delta tonoplast intrinsic protein TIP2
Length = 155
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 145 MEAVLTFSLLFAVYATVVDRRRXXXXXXX-XXXXXXXXXNILAGGPYSGASMNPARSFGP 203
ME ++TF L++ VYAT D ++ NIL GP+SG SMNPARSFGP
Sbjct: 51 MEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGP 110
Query: 204 ALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGHEPLPRND 248
A+A+G++ + WIYWVGPL+GG LAGLVY ++M H P+ ++
Sbjct: 111 AVASGDYTNIWIYWVGPLVGGGLAGLVYRYVYMCGD-HAPVASSE 154
>Os04g0550800 Major intrinsic protein family protein
Length = 269
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 99/249 (39%), Gaps = 11/249 (4%)
Query: 6 LGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDT-IMGLTXXXXXXXX 64
+ + P LRA AE TFLFVF VGS ++A L + L
Sbjct: 5 CANMKRCFSPPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAF 64
Query: 65 XXXXXXXXGLHVSGGHINPAVTLGLAAGGHITLFRXXXXXXXXXXXXXXXXXXXXXXTGG 124
VSGGH+NPAVT A GGHIT+ + G
Sbjct: 65 GLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAG 124
Query: 125 EEXXXXXXXXXXXXXXXXXXMEAVLTFSLLFAVYATVVDRRRXXXXXXXXXXXX------ 178
+ +E VLTF +++ V+ R
Sbjct: 125 QAVPTTRIAVEMTGFGAGI-LEGVLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGALVV 183
Query: 179 --XXXXNILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFM 236
+LA G +GASMNPARSFGPA+ +G +++ +YW GP++G +A LV++ L
Sbjct: 184 GAVTGACVLAAGSLTGASMNPARSFGPAVVSGHYSNQAVYWAGPMVGAAVAALVHQALVF 243
Query: 237 GPPGHEPLP 245
P EP P
Sbjct: 244 -PTVPEPAP 251
>Os03g0146100 Similar to Tonoplast intrinsic protein
Length = 196
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 3 KLALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTI-MGLTXXXXX 61
+A+G H+E PG L+A +AE + T +FVF+G GS MA +KL GGG T GL
Sbjct: 5 NIAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVA 64
Query: 62 XXXXXXXXXXXGLHVSGGHINPAVTLGLAAGGHITLFRXXXXXXXXXXXXXXXXXXXXXX 121
G ++SGGH+NPAVT G GG+ITLFR
Sbjct: 65 HAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFS 124
Query: 122 TGGEEXXXXXXXXXXXXXXXXXXMEAVLTFSLLFAVYATVVDRRR 166
TGG +E V+TF L++ VYAT VD ++
Sbjct: 125 TGG--LATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKK 167
>Os02g0232900 Similar to NOD26-like membrane integral protein ZmNIP1-1
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 76/203 (37%), Gaps = 6/203 (2%)
Query: 18 LRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTIMGLTXXXXXXXXXXXXXXXXGLHVS 77
++ ++AE+ T+ +F+G G A+ + G T G+ H+S
Sbjct: 47 IQKIIAEIFGTYFLIFAGCG-AVTINQSKNGQITFPGVAIVWGLAVMVMVYAVG---HIS 102
Query: 78 GGHINPAVTLGLAAGGHITLFRXXXXXXXXXXXXXXXXXXXXXXTGGEEXXXXXXXXXXX 137
G H NPAVTL A + GG
Sbjct: 103 GAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLRLMFGGRHEHFPGTLPAGS 162
Query: 138 XXXXXXXMEAVLTFSLLFAVYATVVDRRRXXXXXXXXXXXXXXXXNILAGGPYSGASMNP 197
+E ++TF L+F + D R N+L GP SGASMNP
Sbjct: 163 DVQSLV-LEFIITFYLMFVISGVATDNR-AIGELAGLAVGATILLNVLIAGPISGASMNP 220
Query: 198 ARSFGPALAAGEWADHWIYWVGP 220
ARS GPA+ GE+ W+Y VGP
Sbjct: 221 ARSLGPAMIGGEYRSIWVYIVGP 243
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.142 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,637,063
Number of extensions: 293315
Number of successful extensions: 721
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 706
Number of HSP's successfully gapped: 15
Length of query: 251
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 153
Effective length of database: 11,918,829
Effective search space: 1823580837
Effective search space used: 1823580837
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 155 (64.3 bits)