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Os05g0231700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Tonoplast membrane integral protein ZmTIP4-2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0345) R2 : 0.867
β1 : -0.699 (0.127) R2dD : 0.00934 R2D : 0.0153
β2 : 2.66 (0.0892) R2dC : 0.259 R2C : 0.225
β3 : -4.04 (0.093) R2dE : 0.551 R2E : 0.546
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -5.15 (0.416) R2dD*E : 0.0448 R2D*E : 0.0531
γ1 : 0.47 (0.0738) R2dN8 : 0.0158 R2N8 : 0.0102
σ : 0.646
deviance : 192.5
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C
peak time of C : 16.6
E
wheather : temperature
threshold : 4.69
memory length : 245
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 4.73
open length of G : 6.61

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
183.2 0.636 12.3 -0.701 2.63 -4.08 -1.92 -5.11 0.486 16.7 5.159 247 4.7 6.52
235.52 0.715 12.2 -0.721 2.64 -4.25 -2.3 -- 0.442 16.1 4.042 229 4.75 6.78
192.5 0.646 12.3 -0.699 2.66 -4.04 -- -5.15 0.47 16.6 4.69 245 4.73 6.61
254.91 0.744 12.3 -0.668 2.53 -4.18 -- -- 0.518 16.5 6.747 224 4.7 6.79
363.03 0.887 12.2 -0.6 -- -4.49 -- -3.55 0.627 -- 5.067 233 2.68 8.27
437.07 0.98 12.4 -0.739 4.15 -- 3.37 -- 0.391 20.1 -- -- -- --
468.5 1.01 12.4 -0.826 4.17 -- -- -- 0.398 19.9 -- -- -- --
401.8 0.934 12.2 -0.638 -- -4.44 -- -- 0.566 -- 3.493 218 2.72 8.3
264.75 0.758 12.2 -- 2.58 -4.17 -- -- 0.582 16.6 9.869 217 4.7 6.87
1416.38 1.76 12.3 -0.87 -- -- -- -- 0.344 -- -- -- -- --
486.48 1.03 12.3 -- 4.18 -- -- -- 0.49 19.9 -- -- -- --
412.19 0.946 12.2 -- -- -4.54 -- -- 0.644 -- 5.264 218 2.7 8.3
1436.34 1.77 12.2 -- -- -- -- -- 0.44 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 192.18 temperature 10.0 270 > th dose dependent rect. 5 6
5 204.27 wind 5.0 270 < th dose independent rect. 5 6
8 208.59 temperature 15.0 270 > th dose independent rect. 5 6
10 210.29 precipitation 0.1 270 < th dose independent rect. 5 6
11 210.29 precipitation 0.1 270 < th dose dependent rect. 5 6
14 211.11 wind 9.0 270 < th dose dependent rect. 5 6
16 211.22 atmosphere 995.0 270 > th dose independent rect. 5 6
17 211.22 atmosphere 1015.0 270 < th dose independent rect. 5 6
18 211.22 temperature 10.0 270 > th dose independent rect. 11 18
20 212.56 radiation 1.0 270 > th dose independent rect. 4 7
34 213.46 wind 9.0 270 < th dose independent rect. 11 18
38 214.41 wind 7.0 270 < th dose independent rect. 18 16
41 214.97 humidity 50.0 270 > th dose independent rect. 5 6
49 216.34 humidity 50.0 270 > th dose independent rect. 17 17
55 216.89 temperature 10.0 270 > th dose independent rect. 10 7
56 216.89 atmosphere 1015.0 270 < th dose independent rect. 10 7
57 216.89 temperature 10.0 270 > th dose independent rect. 17 17
59 217.62 wind 1.0 270 > th dose independent rect. 10 7
66 218.83 precipitation 0.1 270 < th dose independent rect. 17 17
67 218.83 precipitation 0.1 270 < th dose dependent rect. 17 17
78 219.04 precipitation 0.1 270 < th dose independent rect. 10 7
79 219.04 precipitation 0.1 270 < th dose dependent rect. 10 7
82 219.33 atmosphere 995.0 270 > th dose independent rect. 18 16
84 219.70 precipitation 0.1 270 < th dose independent rect. 11 18
85 219.70 precipitation 0.1 270 < th dose dependent rect. 11 18
96 220.93 radiation 1.0 270 > th dose independent sin 8 NA
97 221.12 temperature 15.0 10 > th dose dependent rect. 6 7
103 221.62 wind 9.0 270 < th dose independent rect. 10 7
109 222.20 radiation 10.0 270 < th dose dependent rect. 22 9
117 223.32 atmosphere 995.0 270 > th dose independent rect. 10 7
142 226.59 radiation 10.0 270 < th dose dependent sin 9 NA
153 227.63 radiation 1.0 270 < th dose independent rect. 22 17
156 227.79 atmosphere 995.0 270 > th dose independent rect. 11 18
157 227.81 radiation 1.0 270 < th dose independent sin 9 NA
175 229.62 radiation 10.0 270 < th dose dependent rect. 22 16
180 230.16 radiation 1.0 270 < th dose independent rect. 22 9
212 232.65 wind 9.0 270 < th dose independent rect. 6 16
215 233.00 temperature 15.0 270 > th dose independent rect. 6 16
216 233.01 temperature 15.0 270 > th dose independent rect. 22 8
226 233.50 temperature 30.0 270 < th dose independent rect. 22 8
227 233.50 humidity 50.0 270 > th dose independent rect. 22 8
230 233.50 atmosphere 995.0 270 > th dose independent rect. 22 8
237 233.60 wind 9.0 270 < th dose independent rect. 22 8
271 234.70 radiation 1.0 270 > th dose independent rect. 11 6
348 237.79 precipitation 0.1 270 < th dose independent rect. 22 8
349 237.79 precipitation 0.1 270 < th dose dependent rect. 22 8
351 237.91 radiation 20.0 90 < th dose dependent sin 7 NA
360 238.39 wind 1.0 270 > th dose independent rect. 5 6
366 238.63 radiation 20.0 10 < th dose dependent sin 5 NA
376 239.05 atmosphere 1015.0 270 < th dose independent rect. 11 18
384 239.83 precipitation 0.1 270 < th dose independent rect. 6 16
385 239.83 precipitation 0.1 270 < th dose dependent rect. 6 16
417 241.04 wind 1.0 270 > th dose independent rect. 11 18
431 241.55 temperature 30.0 270 < th dose independent rect. 18 16
473 243.45 atmosphere 1015.0 270 < th dose independent rect. 22 8
503 244.19 atmosphere 1015.0 270 < th dose independent rect. 24 16
504 244.26 temperature 10.0 270 > th dose independent rect. 16 8
505 244.26 radiation 40.0 270 < th dose independent rect. 16 8
506 244.26 temperature 10.0 270 > th dose independent rect. 24 16
512 244.47 atmosphere 995.0 270 > th dose independent rect. 24 16
518 244.74 wind 9.0 270 < th dose independent rect. 16 8
530 245.49 radiation 40.0 30 < th dose independent rect. 12 18
532 245.55 humidity 50.0 270 > th dose independent rect. 11 5
536 245.71 atmosphere 1015.0 270 < th dose independent rect. 6 15
559 246.66 humidity 50.0 270 > th dose independent rect. 24 15
674 249.61 temperature 10.0 270 > th dose dependent rect. 22 8
703 250.81 humidity 50.0 270 > th dose dependent rect. 22 8
705 250.89 humidity 90.0 270 < th dose independent rect. 11 6
707 250.90 precipitation 0.1 270 < th dose independent rect. 16 8
709 250.90 precipitation 0.1 270 < th dose dependent rect. 16 8
715 250.99 wind 1.0 270 > th dose independent rect. 17 17
727 251.42 wind 9.0 270 < th dose independent rect. 24 16
731 251.52 precipitation 0.1 270 < th dose independent rect. 24 16
732 251.52 precipitation 0.1 270 < th dose dependent rect. 24 16
748 251.82 radiation 1.0 10 > th dose independent rect. 6 7
786 252.98 wind 1.0 270 > th dose independent rect. 16 8
793 253.36 atmosphere 995.0 270 > th dose independent rect. 16 8
805 253.59 radiation 40.0 270 < th dose dependent rect. 16 8
806 253.68 temperature 30.0 270 < th dose independent rect. 5 6
810 253.73 precipitation 0.1 10 < th dose independent rect. 6 7
811 253.73 precipitation 0.1 10 < th dose dependent rect. 6 7
824 254.01 temperature 15.0 10 > th dose independent rect. 13 17
851 254.58 temperature 10.0 10 > th dose independent rect. 6 7
853 254.58 atmosphere 995.0 10 > th dose independent rect. 6 7
854 254.58 atmosphere 1015.0 10 < th dose independent rect. 6 7
857 254.61 wind 9.0 10 < th dose independent rect. 6 7
861 254.69 humidity 90.0 90 < th dose independent rect. 6 7
918 256.73 wind 9.0 10 < th dose independent rect. 13 17
926 256.95 temperature 10.0 1440 > th dose independent rect. 7 7
929 256.95 atmosphere 995.0 1440 > th dose independent rect. 7 7
931 256.95 temperature 10.0 1440 > th dose independent rect. 14 17
961 257.94 wind 1.0 10 > th dose independent rect. 6 7
977 258.33 wind 9.0 270 < th dose dependent rect. 22 8