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Os02g0658100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Tonoplast membrane integral protein ZmTIP2-1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.76 (0.0262) R2 : 0.846
β1 : 2.28 (0.0996) R2dD : 0.205 R2D : 0.0811
β2 : 2.19 (0.0775) R2dC : 0.395 R2C : 0.575
β3 : -1.82 (0.149) R2dE : 0.084 R2E : 0.143
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.943 (0.0591) R2dN8 : 0.133 R2N8 : 0.0125
σ : 0.482
deviance : 107.15
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C
peak time of C : 3.03
E
wheather : temperature
threshold : 15.19
memory length : 112
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.55 0.478 6.77 2.17 2.18 -1.87 -1.23 -0.7 0.921 3.15 15.1 90 -- --
103.82 0.475 6.76 2.28 2.18 -1.88 -1.04 -- 0.942 3.14 15.2 102 -- --
106.96 0.482 6.76 2.34 2.2 -1.84 -- 0.471 0.961 3.03 15.2 123 -- --
107.15 0.482 6.76 2.28 2.19 -1.82 -- -- 0.943 3.03 15.19 112 -- --
281.55 0.781 6.65 2.98 -- -3.51 -- 1.86 1.4 -- 21.53 42 -- --
140.63 0.556 6.81 1.89 2.73 -- -0.709 -- 0.677 3.12 -- -- -- --
142.26 0.559 6.81 1.9 2.73 -- -- -- 0.682 3.09 -- -- -- --
283.41 0.784 6.71 2.57 -- -3.38 -- -- 1.17 -- 23.52 39 -- --
231.37 0.708 6.84 -- 2.56 -0.748 -- -- 0.556 3.07 10.5 119 -- --
567.29 1.11 6.8 2.02 -- -- -- -- 0.753 -- -- -- -- --
237.49 0.721 6.86 -- 2.77 -- -- -- 0.47 3.1 -- -- -- --
449.62 0.988 6.79 -- -- -2.98 -- -- 0.8 -- 24.1 33 -- --
674.61 1.21 6.86 -- -- -- -- -- 0.529 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 92.72 temperature 15 90 > th dose dependent rect. 21 22
2 93.58 temperature 15 90 > th dose dependent rect. 23 20
13 95.59 temperature 10 270 > th dose dependent rect. 5 12
17 95.91 temperature 15 90 > th dose dependent rect. 7 12
117 101.53 temperature 10 720 > th dose dependent rect. 6 3
129 101.86 temperature 15 270 > th dose dependent sin 2 NA
132 101.98 temperature 30 90 < th dose dependent rect. 18 19
153 102.53 temperature 30 90 < th dose dependent rect. 18 21
202 103.55 temperature 15 90 > th dose dependent no NA NA
203 103.57 temperature 15 90 > th dose dependent rect. 6 23
226 104.00 temperature 30 270 < th dose dependent rect. 1 21
246 104.35 temperature 30 90 < th dose dependent rect. 1 23
267 104.73 temperature 10 720 > th dose dependent rect. 21 13
282 104.88 temperature 30 90 < th dose dependent rect. 9 23
294 105.12 temperature 30 90 < th dose dependent rect. 3 23
347 105.74 temperature 30 90 < th dose dependent rect. 13 23
348 105.75 temperature 30 90 < th dose dependent no NA NA
403 106.30 temperature 20 90 > th dose dependent rect. 13 23
447 106.71 temperature 30 90 < th dose dependent rect. 5 18
455 106.79 temperature 25 270 > th dose independent rect. 21 21
456 106.79 temperature 30 270 < th dose dependent rect. 2 10
470 106.94 temperature 20 90 > th dose dependent rect. 2 23
512 107.37 temperature 30 270 < th dose dependent sin 2 NA
516 107.41 temperature 30 270 < th dose dependent rect. 7 23
533 107.52 temperature 30 90 < th dose dependent sin 23 NA
631 108.44 temperature 30 90 < th dose dependent rect. 10 13
643 108.57 temperature 10 270 > th dose dependent rect. 11 23
646 108.58 temperature 20 30 > th dose dependent rect. 15 23
704 108.95 temperature 30 270 < th dose dependent rect. 7 14
879 110.05 temperature 30 10 < th dose dependent rect. 5 19
925 110.40 humidity 90 270 < th dose independent rect. 6 11