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Os06g0336200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Delta tonoplast intrinsic protein TIP2;2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0434) R2 : 0.769
β1 : -3.77 (0.16) R2dD : 0.297 R2D : 0.235
β2 : 2.03 (0.108) R2dC : 0.198 R2C : 0.271
β3 : -1.68 (0.112) R2dE : 0.127 R2E : 0.215
β4 : 2.65 (0.393) R2dD*C : 0.0233 R2D*C : -0.0139
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.2 (0.0926) R2dN8 : 0.114 R2N8 : 0.0145
σ : 0.81
deviance : 302.19
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_____
C
peak time of C : 11.2
E
wheather : humidity
threshold : 68.13
memory length : 38
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 23.9
open length of G : 6.27

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
302.22 0.817 11.9 -3.77 2.05 -1.67 2.63 -0.0812 -1.2 11.2 69.26 37 23.9 6.33
302.19 0.81 11.9 -3.77 2.03 -1.68 2.65 -- -1.2 11.2 68.13 38 23.9 6.27
327.58 0.843 11.9 -3.7 1.94 -1.7 -- -1.25 -1.24 11.1 66.47 48 23.7 6.27
332.01 0.849 11.9 -3.65 1.98 -1.74 -- -- -1.21 11.2 70.18 39 23.8 6.43
484.88 1.03 12 -3.64 -- -2.24 -- -1.07 -1.41 -- 64.51 17 23.3 7.44
373.42 0.906 11.9 -3.85 2.75 -- 2.7 -- -1.09 12.9 -- -- -- --
403.92 0.941 11.9 -3.75 2.75 -- -- -- -1.08 13 -- -- -- --
472.08 1.02 11.9 -3.67 -- -2.21 -- -- -1.29 -- 52.44 15 22.8 7.23
677.26 1.21 11.8 -- 2.05 -2.18 -- -- -0.905 11.1 81.23 55 23.6 6.5
874.88 1.38 11.9 -3.86 -- -- -- -- -1.13 -- -- -- -- --
775.37 1.3 11.8 -- 2.81 -- -- -- -0.658 13.1 -- -- -- --
728.66 1.26 11.9 -- -- -2.63 -- -- -0.97 -- 63.07 7 19.9 10.4
1267.43 1.66 11.8 -- -- -- -- -- -0.702 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 304.39 humidity 70.0 30 > th dose dependent rect. 24 6
3 305.33 wind 7.0 30 < th dose dependent rect. 24 6
13 307.92 temperature 10.0 30 > th dose dependent rect. 24 6
14 308.22 wind 3.0 30 < th dose independent rect. 24 6
16 308.52 atmosphere 1015.0 30 < th dose independent rect. 6 18
30 309.71 precipitation 0.1 30 < th dose independent rect. 6 18
31 309.71 precipitation 0.1 30 < th dose dependent rect. 6 18
32 309.77 humidity 80.0 30 > th dose independent rect. 24 6
36 310.05 wind 7.0 30 < th dose independent rect. 24 6
37 310.13 radiation 10.0 30 < th dose independent rect. 24 6
38 310.19 temperature 10.0 1440 > th dose independent rect. 1 6
41 310.19 temperature 30.0 1440 < th dose independent rect. 1 6
45 310.19 humidity 50.0 1440 > th dose independent rect. 1 6
50 310.19 atmosphere 995.0 1440 > th dose independent rect. 1 6
51 310.19 radiation 40.0 1440 < th dose independent rect. 1 6
55 310.19 temperature 10.0 1440 > th dose independent rect. 7 18
59 310.22 temperature 10.0 30 > th dose independent rect. 24 6
60 310.22 temperature 30.0 30 < th dose independent rect. 24 6
61 310.22 humidity 50.0 30 > th dose independent rect. 24 6
64 310.22 atmosphere 995.0 30 > th dose independent rect. 24 6
68 310.22 temperature 10.0 30 > th dose independent rect. 6 18
73 310.49 atmosphere 1010.0 30 < th dose independent rect. 24 6
91 310.79 wind 9.0 30 < th dose independent rect. 6 18
100 311.32 precipitation 0.1 30 < th dose independent rect. 24 6
101 311.32 precipitation 0.1 30 < th dose dependent rect. 24 6
112 311.78 wind 9.0 30 < th dose dependent rect. 14 16
118 312.14 radiation 40.0 30 < th dose dependent rect. 24 6
123 312.33 wind 1.0 30 > th dose independent rect. 6 18
127 312.51 wind 5.0 270 < th dose dependent rect. 1 2
134 313.02 wind 3.0 270 < th dose independent rect. 1 2
161 313.55 wind 9.0 1440 < th dose independent rect. 2 5
286 315.59 humidity 80.0 10 > th dose dependent rect. 24 8
315 315.82 precipitation 0.1 270 < th dose independent rect. 3 22
316 315.82 precipitation 0.1 270 < th dose dependent rect. 3 22
365 316.60 atmosphere 995.0 30 > th dose independent rect. 6 18
392 316.95 humidity 50.0 30 > th dose independent rect. 6 18
393 317.00 atmosphere 1015.0 10 < th dose dependent rect. 2 4
395 317.01 temperature 10.0 270 > th dose dependent rect. 1 2
407 317.30 humidity 50.0 270 > th dose dependent rect. 1 2
433 318.23 atmosphere 1015.0 30 < th dose dependent rect. 24 6
451 318.56 precipitation 0.1 270 < th dose independent rect. 1 2
452 318.56 precipitation 0.1 270 < th dose dependent rect. 1 2
455 318.67 temperature 10.0 270 > th dose independent rect. 1 2
457 318.67 temperature 30.0 270 < th dose independent rect. 1 2
458 318.67 humidity 50.0 270 > th dose independent rect. 1 2
461 318.67 atmosphere 995.0 270 > th dose independent rect. 1 2
462 318.67 atmosphere 1010.0 270 < th dose independent rect. 1 2
464 318.67 radiation 1.0 270 < th dose independent rect. 1 2
469 318.67 temperature 10.0 270 > th dose independent rect. 3 22
470 318.67 radiation 1.0 270 < th dose dependent rect. 1 2
475 318.69 wind 9.0 270 < th dose independent rect. 1 2
493 319.19 temperature 10.0 30 > th dose dependent rect. 6 18
494 319.34 radiation 10.0 90 < th dose dependent sin 7 NA
522 320.04 humidity 50.0 10 > th dose dependent rect. 14 16
531 320.19 atmosphere 1015.0 270 < th dose dependent rect. 1 2
545 320.59 precipitation 0.1 270 < th dose independent rect. 15 9
546 320.59 precipitation 0.1 270 < th dose dependent rect. 15 9
554 320.69 humidity 90.0 30 > th dose independent rect. 1 11
574 321.13 wind 9.0 270 < th dose independent rect. 3 22
576 321.20 wind 5.0 30 < th dose dependent rect. 20 10
585 321.37 radiation 10.0 90 < th dose dependent rect. 24 12
597 321.63 humidity 80.0 10 > th dose dependent sin 7 NA
605 321.92 atmosphere 995.0 270 > th dose independent rect. 11 17
608 321.99 humidity 90.0 30 > th dose independent rect. 1 17
619 322.12 humidity 90.0 30 > th dose independent rect. 1 15
627 322.18 humidity 50.0 10 > th dose dependent rect. 16 14
660 322.58 wind 1.0 270 > th dose independent rect. 3 21
682 322.92 humidity 90.0 30 < th dose independent sin 5 NA
696 323.12 atmosphere 995.0 270 > th dose independent rect. 24 15
697 323.14 atmosphere 995.0 270 > th dose independent rect. 9 10
730 323.29 atmosphere 995.0 270 > th dose independent rect. 10 19
731 323.30 atmosphere 1015.0 1440 < th dose independent rect. 3 4
732 323.31 wind 1.0 90 > th dose independent rect. 6 5
742 323.42 radiation 40.0 10 < th dose independent rect. 12 18
757 323.64 radiation 1.0 90 < th dose independent rect. 1 10
758 323.65 atmosphere 1005.0 10 > th dose dependent rect. 6 5
798 323.92 wind 9.0 10 < th dose independent rect. 14 16
812 324.02 atmosphere 995.0 30 > th dose dependent rect. 24 6
814 324.04 radiation 40.0 10 < th dose dependent rect. 11 19
817 324.11 temperature 10.0 270 > th dose independent rect. 15 9
818 324.11 temperature 10.0 270 > th dose independent rect. 24 15
823 324.15 atmosphere 995.0 10 > th dose independent rect. 14 16
824 324.16 atmosphere 1015.0 270 < th dose independent rect. 24 15
843 324.34 temperature 20.0 90 > th dose independent rect. 6 5
848 324.40 humidity 60.0 30 > th dose independent rect. 6 6
850 324.41 atmosphere 1015.0 90 < th dose dependent rect. 17 8
852 324.45 atmosphere 1000.0 10 > th dose independent rect. 12 18
856 324.48 wind 9.0 270 < th dose independent rect. 24 15
865 324.60 radiation 40.0 270 < th dose independent rect. 15 9
905 324.79 temperature 10.0 10 > th dose independent rect. 6 8
907 324.79 atmosphere 995.0 10 > th dose independent rect. 6 8
908 324.79 atmosphere 1015.0 10 < th dose independent rect. 6 8
909 324.79 temperature 10.0 10 > th dose independent rect. 14 16
910 324.80 wind 9.0 10 < th dose independent rect. 6 8
911 324.80 precipitation 0.1 270 < th dose independent rect. 24 15
912 324.80 precipitation 0.1 270 < th dose dependent rect. 24 15
931 324.94 precipitation 0.1 10 < th dose independent rect. 6 8
933 324.94 precipitation 0.1 10 < th dose dependent rect. 6 8
935 324.95 wind 9.0 10 < th dose independent rect. 12 18
936 324.95 atmosphere 1015.0 270 < th dose independent rect. 4 20
938 324.97 wind 9.0 90 < th dose independent rect. 11 19
939 324.97 temperature 10.0 90 > th dose dependent rect. 6 5
947 325.02 precipitation 0.1 90 < th dose independent rect. 6 5
948 325.02 precipitation 0.1 90 < th dose dependent rect. 6 5
949 325.03 humidity 90.0 90 < th dose independent rect. 5 6
951 325.04 atmosphere 995.0 90 > th dose independent rect. 6 5
952 325.04 atmosphere 1015.0 90 < th dose independent rect. 6 5
953 325.04 temperature 10.0 90 > th dose independent rect. 11 19
996 325.36 wind 9.0 90 < th dose independent rect. 6 5