Os01g0232100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tonoplast membrane integral protein ZmTIP4-3.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0232100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Tonoplast membrane integral protein ZmTIP4-3.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 446.26 | 0.993 | 7.85 | 4 | 2.14 | -0.83 | 0.595 | -6.03 | 1.13 | 23.3 | 1005 | 8047 | -- | -- |
| 472.76 | 1.01 | 7.79 | 4.44 | 2.2 | -1.38 | 1.35 | -- | 1.12 | 23.2 | 1004 | 11420 | -- | -- |
| 447.54 | 0.985 | 7.85 | 4.05 | 2.13 | -0.823 | -- | -6 | 1.14 | 23.3 | 1004 | 8040 | -- | -- |
| 468.85 | 1.01 | 7.8 | 4.44 | 2.12 | -1.65 | -- | -- | 1.12 | 23.3 | 1001 | 10930 | -- | -- |
| 729.45 | 1.26 | 7.79 | 4.21 | -- | -1.01 | -- | -5.64 | 1.18 | -- | 1002 | 8377 | -- | -- |
| 528.97 | 1.08 | 7.76 | 4.15 | 2.13 | -- | 0.591 | -- | 1.27 | 23.3 | -- | -- | -- | -- |
| 530.47 | 1.08 | 7.76 | 4.13 | 2.13 | -- | -- | -- | 1.26 | 23.3 | -- | -- | -- | -- |
| 749.07 | 1.27 | 7.75 | 4.5 | -- | -1.67 | -- | -- | 1.12 | -- | 1002 | 11510 | -- | -- |
| 960.53 | 1.44 | 7.88 | -- | 2.19 | -1.06 | -- | -- | 0.721 | 23.5 | 1004 | 8274 | -- | -- |
| 814.73 | 1.33 | 7.71 | 4.18 | -- | -- | -- | -- | 1.29 | -- | -- | -- | -- | -- |
| 979.87 | 1.46 | 7.87 | -- | 2.17 | -- | -- | -- | 0.805 | 23.5 | -- | -- | -- | -- |
| 1250.26 | 1.65 | 7.84 | -- | -- | -1.2 | -- | -- | 0.727 | -- | 996.3 | 13094 | -- | -- |
| 1276.4 | 1.67 | 7.82 | -- | -- | -- | -- | -- | 0.821 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 441.16 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 3 | 441.62 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 14 | 444.53 | wind | 5 | 4320 | > th | dose dependent | rect. | 14 | 14 |
| 16 | 444.66 | wind | 7 | 4320 | > th | dose independent | rect. | 16 | 11 |
| 18 | 444.84 | wind | 7 | 4320 | < th | dose independent | rect. | 15 | 12 |
| 28 | 445.45 | wind | 5 | 4320 | > th | dose dependent | rect. | 14 | 17 |
| 41 | 445.93 | wind | 5 | 4320 | > th | dose dependent | sin | 14 | NA |
| 70 | 447.05 | wind | 7 | 4320 | > th | dose independent | sin | 14 | NA |
| 82 | 447.46 | wind | 7 | 4320 | < th | dose independent | sin | 14 | NA |
| 101 | 448.42 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 155 | 450.21 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 163 | 450.35 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 171 | 450.51 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 192 | 450.82 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 212 | 450.94 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 220 | 451.05 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 221 | 451.05 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 19 | 21 |
| 229 | 451.10 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 21 | 19 |
| 254 | 451.23 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 1 | 14 |
| 257 | 451.25 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 266 | 451.33 | wind | 7 | 4320 | < th | dose independent | rect. | 14 | 19 |
| 267 | 451.35 | atmosphere | 995 | 14400 | > th | dose independent | sin | 4 | NA |
| 273 | 451.41 | atmosphere | 995 | 14400 | < th | dose independent | sin | 4 | NA |
| 278 | 451.45 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 323 | 451.63 | wind | 7 | 4320 | > th | dose independent | rect. | 14 | 19 |
| 342 | 451.77 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 3 | 14 |
| 364 | 451.93 | atmosphere | 995 | 14400 | < th | dose dependent | sin | 2 | NA |
| 418 | 452.11 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 3 | 20 |
| 421 | 452.12 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 5 | 20 |
| 426 | 452.14 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 14 | 11 |
| 451 | 452.23 | atmosphere | 995 | 14400 | < th | dose dependent | sin | 18 | NA |
| 525 | 452.57 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 530 | 452.59 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 531 | 452.59 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 532 | 452.59 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 535 | 452.60 | atmosphere | 995 | 14400 | > th | dose independent | no | NA | NA |
| 537 | 452.60 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 540 | 452.61 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 21 |
| 541 | 452.61 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 5 | 23 |
| 551 | 452.62 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 21 |
| 562 | 452.64 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 19 |
| 573 | 452.65 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 606 | 452.68 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 657 | 452.78 | atmosphere | 995 | 14400 | < th | dose independent | no | NA | NA |
| 658 | 452.78 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 766 | 452.84 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 781 | 452.87 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 990 | 453.17 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 23 | 8 |